CX043688

Overview
NameCX043688
Unique NameCX043688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.862e-16
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = -3
Query:  207 MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSN 404
            ++YRGVR+RPWG++AAEIRDP K   RVWLGT+DT + AA AYD AA   RG KAK NF  ++GS+
Sbjct:   29 IRYRGVRKRPWGRYAAEIRDPVKK-TRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNFGVIVGSS 93          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.738e-16
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = -3
Query:  213 MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIG 404
            ++YRGVRRRPWG++AAEIRDP K   RVWLG+++T E AA AYD AA + RGSKA  NFP LIG
Sbjct:   51 VRYRGVRRRPWGRYAAEIRDPVKK-KRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP-LIG 112          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.881e-16
Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = -3
Query:  225 ARGTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 425
            A G+    +YRGVR+RPWG+FAAEIRDP K  +RVWLGT+D+   AA AYD AA  +RG KAK NFP
Sbjct:   18 AGGSVKEPRYRGVRKRPWGRFAAEIRDPLKK-SRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFP 83          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.881e-16
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = -3
Query:  225 GTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 419
            G    +++RGVR+RPWG+FAAEIRDP K   RVWLGT+D+ E AA AYD AA  +RG KAK NFP
Sbjct:   21 GGSKEIRFRGVRKRPWGRFAAEIRDPWKK-TRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFP 84          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.881e-16
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = -3
Query:  225 THVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 416
            T    ++RGVR+RPWGK+AAEIRDP +   RVWLGT+DT E AA  YD AA ++RG  A+LNFP
Sbjct:   81 TTATRKFRGVRQRPWGKWAAEIRDPSRR-VRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16
Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = -3
Query:  201 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP-HLIGSNVE 398
            YRGVR+R WGK+ AEIR P+   AR+WLGT+DT E AA AYDR AFK+RG  A LNFP H +    E
Sbjct:  143 YRGVRQRQWGKWVAEIRKPRSR-ARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFPEHFVNKESE 208          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15
Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = -3
Query:  219 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHL 398
            YRGVR+R WGK+ AEIR P+ N  R+WLGT+DT E AA AYD+AA+K+RG  A+LNFP+L
Sbjct:  152 YRGVRQRHWGKWVAEIRLPR-NRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNL 210          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.420e-15
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = -3
Query:  189 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPPVR 398
            YRGVR+R WGK+ AEIR P+ N  R+WLGT+DT E AA AYD+AA+K+RG  A+LNFP L  ++   P++
Sbjct:   83 YRGVRQRHWGKWVAEIRLPR-NRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQ 151          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.164e-15
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = -3
Query:  216 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLI 398
            Y+G+R R WGK+ AEIR+P K  +R+WLG+Y TPE AA AYD A F +RG  A+LNFP L+
Sbjct:   30 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELL 89          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.132e-15
Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = -3
Query:  198 GTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEP 419
            G  V   YRGVR+R WGK+ +EIR+P     R+WLG+++TPE AA AYD AAF  RG +A+LNFP L  S   P
Sbjct:   17 GKGVPSAYRGVRKRKWGKWVSEIREPGTKN-RIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELASSLPRP 89          
The following BLAST results are available for this feature:
BLAST of CX043688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ERF79_ARATH2.862e-1662.12Ethylene-responsive transcription factor 8 OS=Arab... [more]
ERF77_ARATH3.738e-1667.19Ethylene-responsive transcription factor 10 OS=Ara... [more]
ERF83_ARATH4.881e-1662.69Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF3_TOBAC4.881e-1663.08Ethylene-responsive transcription factor 3 OS=Nico... [more]
CRF1_ARATH4.881e-1660.94Ethylene-responsive transcription factor CRF1 OS=A... [more]
ERF54_ARATH8.326e-1661.19Ethylene-responsive transcription factor ERF054 OS... [more]
RAP24_ARATH1.087e-1565.00Ethylene-responsive transcription factor RAP2-4 OS... [more]
ERF58_ARATH1.420e-1557.14Ethylene-responsive transcription factor ERF058 OS... [more]
RA210_ARATH3.164e-1559.02Ethylene-responsive transcription factor RAP2-10 O... [more]
ERF21_ARATH4.132e-1554.05Ethylene-responsive transcription factor ERF021 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G10-M20-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043688 ID=CX043688; Name=CX043688; organism=Citrus sinensis; type=EST; length=598bp
GATTTGAAAAGAAATTATTAAGAAGAAGTACGATTACATGTTATGTAAAT
TTGAATCTAAGAAAATTAAGCAAAGCAGCTCTGATACTAATAATTAATTC
ACCCGGGTCTAAAGGACACAACGGATGATGATGAAGAAAGAGACGAAGAA
GAGGAAGGAGGCTCTGGAGACCCACGCTTCTTGGTAACCCTAACCGGGGG
CTCAACATTTGAGCCAATGAGGTGAGGAAAATTGAGCTTAGCCTTGGAGC
CTCGCATCTTGAAAGCGGCTCTATCATAAGCAAATGCTGCACCCTCAGGG
GTATCATAGGTGCCCAGCCAAACTCTTGCCCCATTCTTCTTAGGGTCCCT
TATCTCCGCAGCAAACTTCCCCCACGGCCTCCTCCTCACGCCTCTATACT
GCATCCTCACGTGAGTCCCACGTGCCACATCCATCTGTGGAGTTGGAAGA
GGAGGAGGATGAGGAGGAGAAGTCATACTCGTATCAATATTTGCTATTGC
ACTTCCNATATCATTATTACGACCAAGCTGATCATCAAACGAAATCCACC
CTCCGTTGACGCCGTCATGTAAGGAGGAGTGCGAGCTAGAGCTAACCC
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