CX043688

Overview
NameCX043688
Unique NameCX043688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ESR2_ARATH (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14
Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = -3
Query:  228 MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNF 404
            ++YRGVRRRPWG++AAEIRDP     R WLGT+DT E AA AYD AA  MRG KA+ NF
Sbjct:   56 IRYRGVRRRPWGRYAAEIRDPLSKERR-WLGTFDTAEEAACAYDCAARAMRGLKARTNF 113          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana GN=CRF5 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = -3
Query:  228 MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNF 404
            ++YRGVR+RPWGKFAAEIRDP     R+WLGT+ T E AA  YDRAA +++G  A+ NF
Sbjct:   97 VKYRGVRQRPWGKFAAEIRDPSSR-TRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNF 154          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14
Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = -3
Query:  216 DVARGTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLI 431
            DVA        ++G+R R WGK+ AEIR+P K  +R+WLG+Y TPE AA AYD A F +RG  A LNFP L+
Sbjct:   10 DVAVKMKRERPFKGIRMRKWGKWVAEIREPNKR-SRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELL 80          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14
Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = -3
Query:  210 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGS 398
            +RGVR+R WGK+ AEIR+PK  G R+WLGT+ T E AA AYD AA  M GS A+LNFP  +GS
Sbjct:   78 FRGVRQRIWGKWVAEIREPKI-GTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQSVGS 139          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14
Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = -3
Query:  174 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNF---PHLIGSNVEPPVRVTKKR 401
            ++RGVR+RPWGK+AAEIRDP K   R+WLGTY+T E AA  YD AA ++RG  A  NF   P        PP    KK+
Sbjct:  121 KFRGVRQRPWGKWAAEIRDPLKR-VRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKK 198          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.498e-14
Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = -3
Query:  198 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEP 398
            YRGVR+R WGK+ +EIR+P+K  +R+WLGT+ +PE AA A+D AA  ++G+ A LNFP L GS   P
Sbjct:   36 YRGVRKRNWGKWVSEIREPRKK-SRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRP 101          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = -3
Query:  228 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNF 401
            ++ GVRRRPWG++AAEIRDP     R WLGT+DT   AA AYDRAA  MRG++A+ NF
Sbjct:   35 RFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAHEAALAYDRAALSMRGTQARTNF 91          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = -3
Query:  228 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNF 401
            +YRGVR+RPWGK+AAEIRDP++   R+WLGT+ T E AA  YD AA K+RG  A  NF
Sbjct:  116 KYRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF 172          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.018e-13
Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = -3
Query:  219 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHL 398
            YRGVR+R WGK+ AEIR P+ N  RVWLGT++T E AA AYD AA+ +RG  A LNFP L
Sbjct:  232 YRGVRQRHWGKWVAEIRLPR-NRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFPDL 290          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13
Identity = 35/60 (58.33%), Postives = 46/60 (76.67%), Query Frame = -3
Query:  219 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHL 398
            YRGVR R WGK+ +EIR+P+K  +R+WLGT+ TPE AA A+D AA  ++G+ A LNFP L
Sbjct:   43 YRGVRMRTWGKWVSEIREPRKK-SRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPEL 101          
The following BLAST results are available for this feature:
BLAST of CX043688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ESR2_ARATH2.051e-1466.10Ethylene-responsive transcription factor ESR2 OS=A... [more]
CRF5_ARATH2.051e-1461.02Ethylene-responsive transcription factor CRF5 OS=A... [more]
ERF11_ARATH2.678e-1452.78Ethylene-responsive transcription factor ERF011 OS... [more]
DRE2B_ARATH2.678e-1461.90Dehydration-responsive element-binding protein 2B ... [more]
CRF2_ARATH2.678e-1451.90Ethylene-responsive transcription factor CRF2 OS=A... [more]
TINY_ARATH3.498e-1455.22Ethylene-responsive transcription factor TINY OS=A... [more]
ERF86_ARATH7.793e-1462.07Ethylene-responsive transcription factor ERF086 OS... [more]
CRF4_ARATH7.793e-1462.07Ethylene-responsive transcription factor CRF4 OS=A... [more]
ERF62_ARATH1.018e-1363.33Ethylene-responsive transcription factor ERF062 OS... [more]
ERF37_ARATH1.329e-1358.33Ethylene-responsive transcription factor ERF037 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_12G10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G10-M20-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043688 ID=CX043688; Name=CX043688; organism=Citrus sinensis; type=EST; length=598bp
GATTTGAAAAGAAATTATTAAGAAGAAGTACGATTACATGTTATGTAAAT
TTGAATCTAAGAAAATTAAGCAAAGCAGCTCTGATACTAATAATTAATTC
ACCCGGGTCTAAAGGACACAACGGATGATGATGAAGAAAGAGACGAAGAA
GAGGAAGGAGGCTCTGGAGACCCACGCTTCTTGGTAACCCTAACCGGGGG
CTCAACATTTGAGCCAATGAGGTGAGGAAAATTGAGCTTAGCCTTGGAGC
CTCGCATCTTGAAAGCGGCTCTATCATAAGCAAATGCTGCACCCTCAGGG
GTATCATAGGTGCCCAGCCAAACTCTTGCCCCATTCTTCTTAGGGTCCCT
TATCTCCGCAGCAAACTTCCCCCACGGCCTCCTCCTCACGCCTCTATACT
GCATCCTCACGTGAGTCCCACGTGCCACATCCATCTGTGGAGTTGGAAGA
GGAGGAGGATGAGGAGGAGAAGTCATACTCGTATCAATATTTGCTATTGC
ACTTCCNATATCATTATTACGACCAAGCTGATCATCAAACGAAATCCACC
CTCCGTTGACGCCGTCATGTAAGGAGGAGTGCGAGCTAGAGCTAACCC
back to top