EY659286

Overview
NameEY659286
Unique NameEY659286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:1020..1623. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659286 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14
Identity = 40/94 (42.55%), Postives = 61/94 (64.89%), Query Frame = 1
Query:    1 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 276
            ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  285 IVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of EY659286 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.771e-14
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 1
Query:    1 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 276
            ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F ++FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  285 IVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of EY659286 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 1
Query:    1 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 279
            L+I S+ GEV+K    K I +EGMP+Y+ P  +G + I F V FPE   LS ++   LE +LPPR  V++TD ++D+ E   L + N  E+  R+
Sbjct:  286 LVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLPQLEALLPPRQKVRITD-DMDQVE---LKEFNPNEQSWRQ 376          
BLAST of EY659286 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11
Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 1
Query:    1 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 237
            +++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  294 IVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of EY659286 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11
Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 1
Query:    1 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 237
            +++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  294 IVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of EY659286 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11
Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 1
Query:    1 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 237
            +++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  294 IVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDST 379          
The following BLAST results are available for this feature:
BLAST of EY659286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
DNJA1_BOVIN2.122e-1442.55DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ1_CERAE2.771e-1441.49DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA4_MOUSE4.891e-1141.05DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA2_RAT8.343e-1138.37DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE8.343e-1138.37DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN8.343e-1138.37DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659286 ID=EY659286; Name=EY659286; organism=Citrus sinensis; type=EST; length=604bp
CTCCTCATCAAATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAA
GGCCATAAATGATGAAGGAATGCCTATGTATCAGAGGCCATTTATGAGGG
GCAAACTGTACATTCATTTCAGTGTTGACTTCCCTGAGTCACTGAGCCCA
GACCAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGGACCTCAGTCCA
GCTCACCGATATGGAACTGGATGAGTGTGAAGAAACAACCCTGCATGATG
TGAACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCA
TACGATGAAGATGACGATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGC
TCAGCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATTTAGTATTTTCA
TTGTTTGGGAGAAAAAGATTCTCAACATATTTATTTTCTGTTATAGGCTT
TAGAGGTTCTAGTTTTGGTTTGTCTGTCTTTATTCTTATGTTTTTCTGAT
AACTGACTATGTAATGGAATTCTAGCGTTTGCACCTTCAGACTCAATGCT
CATAATTAATATTTTTAGTGTTTACAATAAAAAAAAAAAAAAAAAAAAAA
AAAA
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