FC871880

Overview
NameFC871880
Unique NameFC871880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.157e-12
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 2
Query:    2 LNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEA-KKGMFVKGYTY 235
            LNA+NQ P   PW ++FSY RALQ + L  WQG+  N  A Q+  + RAK N LA  G+Y   G +++A ++ ++   Y Y
Sbjct:  284 LNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-12
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 2
Query:    2 LNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LN +N+   P PW ++FS+ RALQ +VL TW+G+ EN  AAQ+ LL  AKAN  A +GK+     +    K +FV  + Y
Sbjct:  284 LNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.796e-12
Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 2
Query:    2 LNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNA+N+     PW ++FSY RALQ +VLK W G+ EN +AAQ  L+ RAK N  A  G+Y   G    A + +FV  + Y
Sbjct:  284 LNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.796e-12
Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 2
Query:    2 LNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNA+N  P   PW ++FSY RALQ + L  W+G  EN +AA +  L RA+AN LA  GKY + G    A + ++V  + Y
Sbjct:  284 LNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11
Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 2
Query:    2 LNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVKGYTY 235
            LNA+N  P   PW +SFSY RALQ + L  W G+ EN +A Q++ + RA ANS A  G+Y   G S+ A  + +F   YTY
Sbjct:  284 LNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.960e-11
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 2
Query:    2 LNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNAMN+     PW +SFS+ RALQ + LK W G+ EN E A+ + L R KANS A LG Y  +G++    + + VK Y Y
Sbjct:  278 LNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTY--KGDAAADTESLHVKDYKY 355          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 1.960e-11
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 2
Query:    2 LNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            LNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  GKY   G+   A + ++V  + Y
Sbjct:  284 LNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 2
Query:    2 LNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVKGYTY 235
            LNA+N+ P   PW ++FSY RALQ + L  W+G+ +N EAA +  + RA+ N LA  GKY   GE    A + +++  + Y
Sbjct:  284 LNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 67.781 bits (164), Expect = 4.366e-11
Identity = 37/80 (46.25%), Postives = 47/80 (58.75%), Query Frame = 2
Query:    2 LNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 235
            L+A+N  P   PW ++FSY RALQ +VL+ W G+ EN  A Q  LL RAKAN  A  GKY A G +      +FV  + Y
Sbjct:  283 LSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVA-GSAGAGSGSLFVANHAY 361          
BLAST of FC871880 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.366e-11
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 2
Query:    2 LNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEG-ESEEAKKGMFVKGYTY 235
            LNA+N  P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA LGKY   G +S  A + ++V  + Y
Sbjct:   57 LNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
The following BLAST results are available for this feature:
BLAST of FC871880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ALDOB_SPAAU5.157e-1241.98Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALF_SCHMA6.735e-1243.75Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALF1_LAMJA8.796e-1245.00Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_CARAU8.796e-1243.75Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDOB_SHEEP1.149e-1145.68Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALF_MAIZE1.960e-1146.25Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOC_RAT1.960e-1140.00Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOC_PANTR3.343e-1140.74Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALF_DROME4.366e-1146.25Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDOC_CHICK4.366e-1141.98Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CC08FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3CC08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871880 ID=FC871880; Name=FC871880; organism=Citrus sinensis; type=EST; length=573bp
CTTGAATGCGATGAACCAAGCCCCCAACCCCTGGCACGTGTCCTTTTCTT
ATGCCCGTGCACTTCAGAACACTGTTCTTAAGACATGGCAAGGTCGTCCT
GAGAATACTGAAGCTGCACAAAAGTCACTATTGGTGCGTGCAAAGGCAAA
TTCCTTGGCGCAGCTTGGGAAGTACTCCGCAGAAGGTGAAAGCGAGGAAG
CCAAGAAAGGAATGTTTGTCAAGGGCTACACTTACTAAGCCAATAATATA
CTATGCAGTTTGAGCCTGCCTGAGGCAACTCATGACACTTGTGTCATTGC
GCACTTGCTTTTGTTTTGGTTCCTTCCCTTTTTTTAAAATTTTTTTGGGG
GCAAGCGATTGATACGGACAAGATTTGTATTAGAAGTTTTTTCATTTTCT
TTTACCCACCTAATAACTAGAGAGCTTGAATAAAACCTGTGAGATAAGAA
AAGATTTTACAAACTGTAGCCCAGCGAAAGGGGGACTAGTTAAACAAGAA
TCATTGTATTTCTATGTTTTTATGCTACTGTACTCTAAATTATGAGTTCA
AAAAAAAAAAAAAAAAAAAAAAA
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