CX043687

Overview
NameCX043687
Unique NameCX043687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 1
Query:  427 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFA 549
            +YRGVRRRPWGK+AAEIRD  ++GARVWLGT++T E AA A
Sbjct:   58 KYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALA 98          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 1
Query:  421 RMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFA 549
            +  YRGVR+RPWGKFAAEIRDP K G+RVWLGT+DT   AA A
Sbjct:  153 KKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARA 195          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 1
Query:  424 MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFA 549
            M+YRGVR+RPWGK+AAEIRD  ++GARVWLGT++T E AA A
Sbjct:   12 MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARA 53          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 1
Query:  430 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFA 549
            YRGVR+RPWGKFAAEIRD  + G RVWLGT+DT E AA A
Sbjct:   82 YRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALA 121          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: ERF91_ARATH (Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 1
Query:  427 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFA 549
            +YRGVR+RPWGKFAAEIRD  +NG RVWLGT+ T E AA A
Sbjct:  109 KYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMA 149          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 1
Query:  430 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAA 543
            YRGVRRRPWGK+AAEIRDP K G RVWLGT+DT   AA
Sbjct:   72 YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAA 109          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 1
Query:  430 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDT 528
            YRGVRRRPWGK+AAEIRDP K G R+WLGTYDT
Sbjct:   88 YRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDT 120          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 1
Query:  409 GTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFA 549
            G      YRGVR+RPWGKFAAEIRD  +NG RVWLGT+D  E AA A
Sbjct:   79 GIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALA 125          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 1
Query:  430 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFA 549
            YRGVRRRPWGKFAAEIRD  +NG RVWLGT+++ E AA A
Sbjct:   82 YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALA 121          
BLAST of CX043687 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.050e-11
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 1
Query:  421 RMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFA 549
            R  YRGVR+RPWGK+AAEIRDPKK  ARVWLGT++T E AA A
Sbjct:   87 RRHYRGVRQRPWGKWAAEIRDPKK-AARVWLGTFETAESAALA 128          
The following BLAST results are available for this feature:
BLAST of CX043687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
PTI5_SOLLC1.369e-1173.17Pathogenesis-related genes transcriptional activat... [more]
EF102_ARATH1.369e-1172.09Ethylene-responsive transcription factor 5 OS=Arab... [more]
ERF95_ARATH1.788e-1171.43Ethylene-responsive transcription factor ERF095 OS... [more]
ERF94_ARATH1.788e-1175.00Ethylene-responsive transcription factor ERF094 OS... [more]
ERF91_ARATH1.788e-1173.17Ethylene-responsive transcription factor ERF091 OS... [more]
EF105_ARATH1.788e-1178.95Ethylene-responsive transcription factor ERF105 OS... [more]
EF104_ARATH1.788e-1184.85Ethylene-responsive transcription factor ERF104 OS... [more]
ERF93_ARATH2.335e-1165.96Ethylene-responsive transcription factor 15 OS=Ara... [more]
ERF92_ARATH2.335e-1175.00Ethylene-responsive transcription factor 1B OS=Ara... [more]
EF114_ARATH3.050e-1174.42Ethylene-responsive transcription factor ERF114 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G10-M20-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043687 ID=CX043687; Name=CX043687; organism=Citrus sinensis; type=EST; length=551bp
TTGTAGTAAAACAAAAAGGGGAAAAAAATGAACAGAGAAAATATGTCCGA
GTCAGATTTGGCTCTCCTGGAGTCAATTCGCCAACAACTTCTGGAGGATG
ACTTTGAAATTTTCACGACGTTTCCTTCAGAAACATTACCAATCAACAAT
AATGAAACATTAAATTCCCCTGTTTCGAGCTTCAATAGTTTCTCCTTCAC
AGAGAATATCAATGAGTATCTATCACAAGGGGTTAGCTCTAGCTCGCACT
CCTCCTTACATGACGGCGTCAATGGAGGGTGGATTTCGTTTGATGATCAG
CTTGGTCGTAATAATGATATTGGAAGTGCAATAGCAAATATTGATACGAG
TATGACTTCTCCTCCTCATCCTCCTCCTCTTCCAACTCCACAGATGGATG
TGGCACGTGGGACTCACGTGAGGATGCAGTATAGAGGCGTGAGGAGGAGG
CCGTGGGGGAAGTTTGCTGCGGAGATAAGGGACCCTAAGAAGAATGGGGC
AAGAGTTTGGCTGGGCACCTATGATACCCCTGAGGGTGCAGCATTTGCTT
A
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