CX043276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_DECAR (Tryptophan synthase beta chain OS=Dechloromonas aromatica (strain RCB) GN=trpB PE=3 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.618e-70 Identity = 126/220 (57.27%), Postives = 167/220 (75.91%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 803 K+A +EA+R+WV N+ ++Y+ GTV GPHP P++VR+FQ IIG+E Q E G +PD ++ACVG GSNA+G+F+ +IN E VRLIGVEAAG G+++G+H+A+L G GV HG +YLLQDE+GQI+ THSV GL+YPGVGPE ++L+D GRAE+ TD EA+ A+ LCR+EGI PALE+SHALA+ KL PTL ++VN SG GDKD+ TV Sbjct: 172 KDALNEAMRDWVTNIHNTFYIIGTVAGPHPYPMLVRDFQKIIGEECLVQMPEMTGRQPDAVIACVGGGSNAMGIFYPYINVEGVRLIGVEAAGDGMETGRHSASLTAGVPGVLHGNRTYLLQDEDGQIIETHSVSAGLDYPGVGPEHAWLKDLGRAEYQPVTDSEALAAFHTLCRIEGIIPALESSHALAYAAKLAPTLAKDKILLVNLSGRGDKDMHTV 391
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSEPU (Tryptophan synthase beta chain OS=Pseudomonas putida GN=trpB PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.113e-70 Identity = 129/226 (57.08%), Postives = 163/226 (72.12%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+WV N+E ++YL GTV GPHP P MVR+FQSIIGKETR Q EK G PD L+ACVG GSNA+GLFHEF+ + V++IGVEA G G+ + KHAA+L G GV HG +YLLQDE+GQI HS+ GL+YPG+GPE ++L + R E+ + TD EA+ A+ CRLEGI PALE+SHALA K P LP +VV SG GDKD+ TV+N+ Sbjct: 172 GTLKDAMNEALRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLVACVGGGSNAMGLFHEFLEEPSVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDEDGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHALAEAIKRAPKLPKDHLMVVCLSGRGDKDMQTVMNH 397
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSEE4 (Tryptophan synthase beta chain OS=Pseudomonas entomophila (strain L48) GN=trpB PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.759e-70 Identity = 127/226 (56.19%), Postives = 164/226 (72.57%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+WV N+E ++YL GTV GPHP P MVR+FQSIIGKETR Q EK G PD L+ACVG GSNA+GLFH+F++D V++IGVEA G G+ + KHAA+L G GV HG +YLLQD++GQI HS+ GL+YPG+GPE ++L + R E+ + TD EA+ A+ CRLEGI PALE+SHALA K P LP +V+ SG GDKD+ TV+N+ Sbjct: 172 GTLKDAMNEALRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLIACVGGGSNAMGLFHDFLDDASVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDDDGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHALAEAIKRAPKLPKDHLMVICLSGRGDKDMQTVMNH 397
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRFU (Tryptophan synthase beta chain 1 OS=Pyrococcus furiosus GN=trpB1 PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.604e-70 Identity = 123/226 (54.42%), Postives = 170/226 (75.22%), Query Frame = -1 Query: 126 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNYRYN 803 K+A +EA+R+WV E ++YL G+VVGPHP P +VR+FQS+IG+E + Q +E G PDV++ACVG GSNA+G+F+ F+ND+ V+L+GVEA G GL+SGKH+A+L G+VGV+HG +SY LQDEEGQI THS+ GL+YPGVGPE ++L+ RAE+ T TD+EA++A+ L R EGI PALE++HA+A+ KL + ++VN SG GDKD+D V+ N Sbjct: 162 KDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVNDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDIVLKVSGN 387
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSEPK (Tryptophan synthase beta chain OS=Pseudomonas putida (strain KT2440) GN=trpB PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 4.707e-70 Identity = 128/226 (56.64%), Postives = 163/226 (72.12%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+WV N+E ++YL GTV GPHP P MVR+FQSIIGKETR Q EK G PD L+ACVG GSNA+GLFHEF+ + V++IGVEA G G+ + KHAA+L G GV HG +YLLQD++GQI HS+ GL+YPG+GPE ++L + R E+ + TD EA+ A+ CRLEGI PALE+SHALA K P LP +VV SG GDKD+ TV+N+ Sbjct: 172 GTLKDAMNEALRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLVACVGGGSNAMGLFHEFLEEPSVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDQDGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHALAEAIKRAPKLPKDHLMVVCLSGRGDKDMQTVMNH 397
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSEP1 (Tryptophan synthase beta chain OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpB PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 4.707e-70 Identity = 128/226 (56.64%), Postives = 163/226 (72.12%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+WV N+E ++YL GTV GPHP P MVR+FQSIIGKETR Q EK G PD L+ACVG GSNA+GLFHEF+ + V++IGVEA G G+ + KHAA+L G GV HG +YLLQD++GQI HS+ GL+YPG+GPE ++L + R E+ + TD EA+ A+ CRLEGI PALE+SHALA K P LP +VV SG GDKD+ TV+N+ Sbjct: 172 GTLKDAMNEALRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLVACVGGGSNAMGLFHEFLEEPSVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDQDGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHALAEAIKRAPKLPKDHLMVVCLSGRGDKDMQTVMNH 397
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_ALKMQ (Tryptophan synthase beta chain OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpB PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 4.707e-70 Identity = 123/220 (55.91%), Postives = 166/220 (75.45%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 803 K+A++EAIR+WV N++ +YY+ G+VVGPHP P MVR+FQ IIG E ++Q +EK G P+ L+ACVG GSNA+GLF+ F DE V L GVEAAG G+++ +HAAT+ KG +GV HG M+YLLQDE+GQI HS+ GL+YPG+GPE ++ TGRA + TD+EA++A+Q L RLEGI PALE++HA+A+L KL P +V+N SG GDKD+ T+ Sbjct: 170 KDATNEAIRDWVANVKDTYYVIGSVVGPHPYPTMVRDFQRIIGDEVKEQILEKEGRLPNYLVACVGGGSNAMGLFYPFYEDEAVALYGVEAAGLGVETDQHAATITKGSMGVIHGMMTYLLQDEQGQITPVHSISAGLDYPGIGPEHAYYHHTGRANYVAITDEEALEAFQLLTRLEGIIPALESAHAIAYLMKLAPKTKGDDIIVLNLSGRGDKDIHTI 389
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_METCA (Tryptophan synthase beta chain OS=Methylococcus capsulatus GN=trpB PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 6.147e-70 Identity = 120/220 (54.55%), Postives = 170/220 (77.27%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 803 K+A +EA+R+WV N++ ++Y+ GTV GPHP P MVR+FQ++IG+E R+Q +E G PD L+ACVG GSNA+GLFH F++D +V + GVEAAG G+++G+H+A L+ G GV HG +YL++DE+G+I+ THS+ GL+YPGVGPE ++L+D GRA + +ATD EA++A+ L R EGI PALE+SHA+A+ KL PTL + V+VN SG GDKD+ T+ Sbjct: 178 KDALNEAMRDWVTNVDDTFYIIGTVAGPHPYPAMVRDFQAVIGREARRQMLEMTGRLPDALVACVGGGSNAIGLFHPFVDDREVAMYGVEAAGDGIETGRHSAPLSAGRPGVLHGNRTYLMEDEDGEIIETHSISAGLDYPGVGPEHAWLKDCGRASYVSATDAEALEAFHILTRSEGIIPALESSHAVAYALKLAPTLSSDKIVLVNLSGRGDKDIHTI 397
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSEPG (Tryptophan synthase beta chain OS=Pseudomonas putida (strain GB-1) GN=trpB PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.049e-69 Identity = 128/226 (56.64%), Postives = 162/226 (71.68%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+WV N+E ++YL GTV GPHP P MVR+FQSIIGKETR Q EK G PD L+ACVG GSNA+GLFHEF+ + V++IGVEA G G+ + KHAA+L G GV HG +YLLQD +GQI HS+ GL+YPG+GPE ++L + R E+ + TD EA+ A+ CRLEGI PALE+SHALA K P LP +VV SG GDKD+ TV+N+ Sbjct: 172 GTLKDAMNEALRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLVACVGGGSNAMGLFHEFLEEPSVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDADGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHALAEAIKRAPKLPKDHLMVVCLSGRGDKDMQTVMNH 397
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_ACICJ (Tryptophan synthase beta chain OS=Acidiphilium cryptum (strain JF-5) GN=trpB PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.049e-69 Identity = 125/223 (56.05%), Postives = 164/223 (73.54%), Query Frame = -1 Query: 135 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 803 K+A +EA+R+WV N+ ++Y+ GT GPHP P MVR+FQS+IG E R Q ME G PDV +A +G GSNA+GLFH F+ DE V+LIGVEAAG GLDSG+HAA+L++G GV HG +YLLQD++GQIL HS+ GL+YPG+GPE S+L D GR E+ +ATD EA+ A+Q CR EGI PALE SHALA + K+ P + + +++N G GDKD+ TV + Sbjct: 178 KDAMNEALRDWVANVRDTFYIIGTAAGPHPYPAMVRDFQSVIGVEARAQMMEAEGRLPDVAIAAIGGGSNAIGLFHAFL-DEQVKLIGVEAAGRGLDSGEHAASLSRGRPGVLHGNRTYLLQDDDGQILEAHSISAGLDYPGIGPEHSYLHDIGRVEYVSATDDEALAAFQLCCRTEGIIPALEPSHALAHVAKIAPGMDKESIILMNLCGRGDKDIFTVARH 399 The following BLAST results are available for this feature:
BLAST of CX043276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043276 ID=CX043276; Name=CX043276; organism=Citrus sinensis; type=EST; length=821bpback to top |