CX043276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_LISIN (Tryptophan synthase beta chain OS=Listeria innocua GN=trpB PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.373e-68 Identity = 121/218 (55.50%), Postives = 166/218 (76.15%), Query Frame = -1 Query: 150 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVD 803 K+A +EA+R WV N+E ++Y+ G+V+GPHP P +VR++QS+IG E RKQ +EK G P+ ++ACVG GSNA+GLF+ F++D V++ GVEAAG GL++ HAAT++KGE+G+ HGAM +LQDE GQIL S+ GL+YPG+GPE SF RD GRAE+++ TD EAV+A+Q LCR EGI PALE+SHA+++ KL + +VV SG GDKDV+ Sbjct: 171 KDAVNEALRFWVANVEDTHYIMGSVLGPHPFPEIVRDYQSVIGTEARKQHLEKEGKLPEAIVACVGGGSNAMGLFYPFVDDSSVQMHGVEAAGHGLETEFHAATISKGEIGILHGAMMDVLQDENGQILEAFSISAGLDYPGIGPEHSFFRDLGRAEYHSVTDDEAVEAFQLLCRTEGIIPALESSHAISYAVKLASQMRPDESMVVCLSGRGDKDVN 388
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_RUTMC (Tryptophan synthase beta chain OS=Ruthia magnifica subsp. Calyptogena magnifica GN=trpB PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 4.405e-68 Identity = 121/222 (54.50%), Postives = 167/222 (75.23%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSG--KHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 803 K++ +EA+R+WV N++ ++Y+ GTVVGPHP P+MVR+FQSIIGKET+ Q + GG PDVL+ACVG GSNA+GLFH FI+D V + GVEAAG+GL+ G H+A L G VGV HG +YL++DE GQI+ HS+ GL+YPGVGPE ++L+D+GRA + TD+EA++A+ L ++EGI PALE+SHA+A+ KL L +++N SG GDKD+ T+ Sbjct: 172 KDSINEAMRDWVTNIDDTFYIIGTVVGPHPYPMMVRDFQSIIGKETKVQFAAQVGGLPDVLVACVGGGSNAIGLFHAFIDDASVEIYGVEAAGYGLEKGPTAHSAPLCAGSVGVLHGNRTYLMEDENGQIIEGHSISAGLDYPGVGPEHAYLKDSGRARYVAITDKEALEAFHVLTKVEGILPALESSHAVAYGIKLAKELGKDKHIIINLSGRGDKDIHTI 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PHEZH (Tryptophan synthase beta chain OS=Phenylobacterium zucineum (strain HLK1) GN=trpB PE=3 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68 Identity = 122/223 (54.71%), Postives = 165/223 (73.99%), Query Frame = -1 Query: 135 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 803 K+A +EA+R+WV N+ +YYL G+ G HP P+MVR+FQ++IG+ETR+Q +E G PD L+ACVG GSNA+GLFH F+ND V++ GVEAAG G+++G+HAA + G GV HG M+YLLQD GQI HS+ GL+YPG+GPE ++L D GRA + TATD EA++A++ L LEGI PA+E+SHALA L ++ + VV+N SG GDKDV+TV +Y Sbjct: 179 KDAMNEALRDWVTNVHDTYYLIGSAAGMHPYPMMVRDFQAVIGRETREQILELEGRLPDALVACVGGGSNAIGLFHPFLNDSSVKIFGVEAAGEGVETGRHAAAINGGRPGVLHGNMTYLLQDRVGQIEEAHSISAGLDYPGIGPEHAWLHDVGRATYLTATDTEALEAFRLLSELEGILPAIESSHALARLPEITREVGKDGIVVLNLSGRGDKDVNTVASY 401
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACWK (Tryptophan synthase beta chain OS=Bacillus weihenstephanensis (strain KBAB4) GN=trpB PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 7.514e-68 Identity = 121/229 (52.84%), Postives = 169/229 (73.80%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IGKET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD+EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDEEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACC3 (Tryptophan synthase beta chain OS=Bacillus cereus (strain 03BB102) GN=trpB PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 9.814e-68 Identity = 121/229 (52.84%), Postives = 168/229 (73.36%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ E G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEELEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACAH (Tryptophan synthase beta chain OS=Bacillus thuringiensis (strain Al Hakam) GN=trpB PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 9.814e-68 Identity = 121/229 (52.84%), Postives = 168/229 (73.36%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ E G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEELEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_METJA (Tryptophan synthase beta chain OS=Methanocaldococcus jannaschii GN=trpB PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.282e-67 Identity = 124/220 (56.36%), Postives = 163/220 (74.09%), Query Frame = -1 Query: 144 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 803 K+A +EA+R+W N+ +YYL G+ +GPHP P+MVREFQ +IGKE ++Q +EK G PDV++ACVG GSNA+G F+EF+ D+DV L VEA G G+++G H A+L GEVGV HGA Y+ +DE GQI ++S+ GL+YPGVGPE+SFL+D GR + TD EA++A+Q LCRLEGI PALE+SHALA+ KL L +V+N SG GDKDV TV Sbjct: 178 KDAVNEALRDWTTNVRTTYYLLGSALGPHPYPMMVREFQRVIGKELKEQILEKEGRLPDVIVACVGGGSNAIGAFYEFL-DDDVELYAVEAGGKGIETGMHGASLCAGEVGVLHGAKIYVKEDEFGQIEESYSISAGLDYPGVGPELSFLKDEGRIKAVCVTDDEALEAFQLLCRLEGILPALESSHALAYAVKLADKLDKDDIMVINLSGRGDKDVQTV 396
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_BACCZ (Tryptophan synthase beta chain OS=Bacillus cereus (strain ZK / E33L) GN=trpB PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.282e-67 Identity = 121/229 (52.84%), Postives = 168/229 (73.36%), Query Frame = -1 Query: 135 AVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 821 A G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IGKET+KQ G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y Sbjct: 165 AGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKEDEGLVICLSGRGDKDVESIKRY 393
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_PSESM (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. tomato GN=trpB PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.674e-67 Identity = 122/226 (53.98%), Postives = 162/226 (71.68%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A +EA+R+WV N++ ++YL GTV GPHP P MVR+FQS+IGKET++Q EK G PD L+ACVG GSNA+GLFH F++D V +IGVEA G G+D+ KHAA+L G GV HG +YLLQD +GQI HS+ GL+YPG+GPE ++L + R E+ + TD+EA+ A+ + C LEGI PALE +HALA K L + +VV SG GDKD+ TV+N+ Sbjct: 172 GTLKDAMNEALRDWVTNVDDTFYLIGTVAGPHPYPAMVRDFQSVIGKETKEQMQEKEGRLPDSLIACVGGGSNAMGLFHPFLDDASVEIIGVEAGGHGVDTDKHAASLNGGVPGVLHGNRTYLLQDNDGQITDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDEEALDAFHQCCLLEGIIPALETAHALAEAMKRATNLRDDHLMVVCLSGRGDKDMQTVMNH 397
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_LISMO (Tryptophan synthase beta chain OS=Listeria monocytogenes GN=trpB PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.674e-67 Identity = 121/218 (55.50%), Postives = 165/218 (75.69%), Query Frame = -1 Query: 150 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVD 803 K+A +EA+R WV N+E ++Y+ G+V+GPHP P +VR++QS+IG E RKQ +EK G PD ++ACVG GSNA+GLF+ F++D V++ GVEAAG GL++ HAAT++KGE+G+ HGAM +LQDE GQIL S+ GL+YPG+GPE SF RD GRA +++ TD EAV+A+Q LCR EGI PALE+SHA+++ KL + +VV SG GDKDV+ Sbjct: 171 KDAVNEALRFWVANVEDTHYIMGSVLGPHPFPEIVRDYQSVIGIEARKQHLEKEGKLPDAIVACVGGGSNAMGLFYPFVDDASVQMHGVEAAGHGLETEFHAATISKGEIGILHGAMMDVLQDENGQILEAFSISAGLDYPGIGPEHSFFRDLGRAAYHSVTDDEAVEAFQLLCRTEGIIPALESSHAISYAVKLASKMRPEESMVVCLSGRGDKDVN 388 The following BLAST results are available for this feature:
BLAST of CX043276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043276 ID=CX043276; Name=CX043276; organism=Citrus sinensis; type=EST; length=821bpback to top |