CX043274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.104e-53 Identity = 117/284 (41.20%), Postives = 161/284 (56.69%), Query Frame = 3 Query: 3 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNV---------FRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVP 827 DP D + + + GF A DLV++IR+ Y D F I VAGYPEG+ PD + + +LK KVD GAD I+TQ+FYD D F+ +V+ R GI PI PGIMPI + F+R + KIP L P+KD++E V+ G+ L EMC+K++A GI LH YT+N+EK+ I+ LGL++E+ P NV R+ E VRPIFW R +SY+SRT WD+ P GRWGDSR+P++G ++ R K++ W P Sbjct: 114 DPVKDTD-WTEGESGFRYASDLVRYIRTHYNDEFCIGVAGYPEGY----SPD-----DDIDESIKHLKLKVDEGADFIVTQMFYDVDNFIAWVDKVRAAGINIPIFPGIMPIQAWDSFIRRAKWSGVKIPQHFMDTLVPVKDDDEGVRERGVELIVEMCRKLIASGITRLHFYTMNLEKAVKMIIERLGLLDEN----LAPIVDTNNVELTNASSQDRRINEGVRPIFWRTRNESYVSRTDQWDELPHGRWGDSRSPAFGEFDAIRY-GLRMSPKEITTSWGSP 382
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR2_SCHPO (Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe GN=met11 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.109e-34 Identity = 99/308 (32.14%), Postives = 146/308 (47.40%), Query Frame = 3 Query: 3 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITC----PIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAH---GIKTLHLYTLNMEKSALAILLNLGLI-----------EESKISRS------------------LPWRPP-----TNVFRVKED-----------VRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDH 770 DPP D + F A+DLV++IR YGDYF I VA YPEGH D+ P+ ++ D+ +L +KV+AGAD IITQ+FY+ + F+KF N R PI+P IMPI +Y RMT C +P+ + L K ++EA+K G+ +M KKI+ + + H TLN+E+S IL N GL+ E+ K+ R+ +P + P +N+F + F + L R WD + GR+GD R+P+YG + + Sbjct: 113 DPPLNSDHWEGKVSEFEHAVDLVRYIREKYGDYFCIGVAAYPEGHVDSNVPE---LSKDPLRDIPFLIEKVEAGADFIITQIFYEPEAFIKFENFVRNHSSNALRNIPIIPAIMPIQSYGSLKRMTRLCGCSVPSSLMQRLNAAKPDDEAIKNIGVEHIVDMIKKIMDNVQGRVHGFHFCTLNLERSVALILKNSGLLTKRWKQVESEMEDEKLLRTTRKRLSLDEPAELHNQVVVPSQQPVADKSSNLFVTSKQSSVSGHKDNLTEEAPFSVSEGSGVLGRQANWDDFTNGRFGDPRSPAYGEIDGY 417
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: METF_AQUAE (5,10-methylenetetrahydrofolate reductase OS=Aquifex aeolicus GN=metF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.958e-31 Identity = 69/184 (37.50%), Postives = 99/184 (53.80%), Query Frame = 3 Query: 3 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAI 554 D P + + +G A +LV+ IR +GD+F I VA YPEGHP++ + + ++ Y K+KV+AGAD ITQ+F+ D + +FV C+ GI I+PGIMPI N+K + C IP + LE ++D E VK GI C ++ HG+ LH YTLN + L I Sbjct: 109 DVPRDKPDWRPPKGACKYAKELVELIRKEFGDWFSIGVASYPEGHPES---------PNLEWEVKYFKEKVEAGADFSITQMFFVNDYYYRFVEMCKNAGIDISIIPGIMPITNFKQIRKFASLCGATIPQSLIEKLEKVEDKPEEVKKIGIEFAINQCLDLIEHGVPGLHFYTLNKSDATLKI 283
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR1_YEAST (Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae GN=MET12 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 7.698e-28 Identity = 76/192 (39.58%), Postives = 110/192 (57.29%), Query Frame = 3 Query: 3 DPPHGQDKF--VQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQ-IGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEP-IKDNEEAVKAYGIHLGAEMCKKI---LAHGIKTLHLYTLNMEKSALAIL 557 DPP G+D + F A+DLV++I+ +YGD F + VA YPEGH + + + DL+YLK+KV+AGAD +ITQLFYD + FL F R+ I P+ PG+MPIN+Y F R IP I + P I+ ++ AVK+ G+ + E+ ++I + IK H YTLN+EK+ I+ Sbjct: 110 DPPIGEDWLDSQSNESPFKYAVDLVRYIKQSYGDKFCVGVAAYPEGHCEG---EAEGHEQDPLKDLVYLKEKVEAGADFVITQLFYDVEKFLTFEMLFRERISQDLPLFPGLMPINSYLLFHRAAKLSHASIPPAILSRFPPEIQSDDNAVKSIGVDILIELIQEIYQRTSGRIKGFHFYTLNLEKAIAQIV 298
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: METF_HAEIN (5,10-methylenetetrahydrofolate reductase OS=Haemophilus influenzae GN=metF PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.099e-25 Identity = 64/172 (37.21%), Postives = 95/172 (55.23%), Query Frame = 3 Query: 57 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 572 A DLV+ +RS F I+VA YPE HP+ +S Q+DL+ LK+K+DAGA+ +ITQ F+D + +L+F + C IGI IVPGI+P+ N+K +M F KIPA + A + + ++ + +M K + G+ H YTLN + AI LG+ Sbjct: 130 ASDLVELLRSVAD--FDISVAAYPEVHPEA---------KSAQADLINLKRKIDAGANHVITQFFFDIENYLRFRDRCASIGIDTEIVPGILPVTNFKQLQKMASFTNVKIPAWLVKAYDGLDNDPTTRNLVAASVAMDMVKILSREGVNDFHFYTLNRSELTYAICHMLGV 290
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: METF_NEIMB (5,10-methylenetetrahydrofolate reductase OS=Neisseria meningitidis serogroup B GN=metF PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.966e-25 Identity = 64/172 (37.21%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 57 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 572 A DLVK +RS F I+VA YPE HP+ +S Q+DL+ LK+K+DAGA+ +ITQ F+D + +L+F + C +GI IVPGI+P+ N+K +M KIP+ ++ E + D++ + +M K + G+K H YTLN + AI LG+ Sbjct: 130 AEDLVKLLRSVAD--FDISVAAYPEVHPEA---------KSAQADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQLGKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLNRSELTYAICHILGV 290
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: METF_SHIFL (5,10-methylenetetrahydrofolate reductase OS=Shigella flexneri GN=metF PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.359e-24 Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 102 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 572 F I+VA YPE HP+ +S Q+DLL LK+KVDAGA+ ITQ F+D + +L+F + C GI I+PGI+P++N+K + +IPA + + + D+ E K G ++ +M K + G+K H YTLN + + AI LG+ Sbjct: 145 FDISVAAYPEVHPEA---------KSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: METF_ECOLI (5,10-methylenetetrahydrofolate reductase OS=Escherichia coli (strain K12) GN=metF PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.359e-24 Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 102 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 572 F I+VA YPE HP+ +S Q+DLL LK+KVDAGA+ ITQ F+D + +L+F + C GI I+PGI+P++N+K + +IPA + + + D+ E K G ++ +M K + G+K H YTLN + + AI LG+ Sbjct: 145 FDISVAAYPEVHPEA---------KSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: METF_SALTY (5,10-methylenetetrahydrofolate reductase OS=Salmonella typhimurium GN=metF PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.954e-24 Identity = 58/157 (36.94%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 102 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 572 F I+VA YPE HP+ +S Q+DLL LK+KVDAGA+ ITQ F+D + +L+F + C GI I+PGI+P++N+K + +IP+ ++ E + ++ E K G ++ +M K + G+K H YTLN + + AI LG+ Sbjct: 145 FDISVAAYPEVHPEA---------KSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPSWMSLMFEGLDNDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: METF_PECCC (5,10-methylenetetrahydrofolate reductase OS=Pectobacterium carotovorum subsp. carotovorum GN=metF PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.150e-23 Identity = 62/172 (36.05%), Postives = 95/172 (55.23%), Query Frame = 3 Query: 57 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 572 A DLV ++ GD F I+VA YPE HP+ +S Q+DL+ LK K+DAGA+ ITQ F+D + +L+F + C GI IVPGI+P++N+K + ++P +T + + ++ E K G + +M K + G+K H YTLN + + AI LG+ Sbjct: 132 AADLVSLLKEV-GD-FDISVAAYPEVHPEA---------KSAQADLINLKHKIDAGANRAITQFFFDVESYLRFRDRCVATGIDVEIVPGILPVSNFKQLQKFATMTNVRVPNWMTTMFDGLDNDPETRKMVGASIAMDMVKILSREGVKDFHFYTLNRAELSYAICHTLGV 292 The following BLAST results are available for this feature:
BLAST of CX043274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043274 ID=CX043274; Name=CX043274; organism=Citrus sinensis; type=EST; length=829bpback to top |