CX043270

Overview
NameCX043270
Unique NameCX043270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_CORGB (Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain R) GN=ahcY PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.976e-42
Identity = 94/161 (58.39%), Postives = 112/161 (69.57%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNKDII  + M KMK++A++ NIGHFDNEID+  L     V R TIKPQ D + F  T   IIVL+EGRL+NLG ATGHPSFVMS SF +Q IAQ+EL++ +  G+YE +VY LPK LDEKV           LT LTKEQA+YI V   GP+KP HYRY
Sbjct:  321 TGNKDIISFEQMLKMKDHALLGNIGHFDNEIDMHSLLHRDDVTRTTIKPQVDEFTF-STGRSIIVLSEGRLLNLGNATGHPSFVMSNSFADQTIAQIELFQNE--GQYENEVYRLPKVLDEKVARIHVEALGGQLTELTKEQAEYIGVDVAGPFKPEHYRY 478          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BURTA (Adenosylhomocysteinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.976e-42
Identity = 92/161 (57.14%), Postives = 109/161 (67.70%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I  DHMK M++NAIVCNIGHFD+EIDV     Y       IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+     G+Y  KVYVLPKHLDEKV           L+ L+ +QA YI V   GP+KP HYRY
Sbjct:  319 TGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWEN---IKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTR--GGEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVPKAGPFKPDHYRY 473          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_DELAS (Adenosylhomocysteinase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.499e-42
Identity = 98/163 (60.12%), Postives = 109/163 (66.87%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE-KKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGN+DII  +HM  MKN AIVCNIGHFDNEIDV  +E Y   +   IKPQ D   FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+ +     YE  KVYVLPK LDEKV           LT LT  QA YI VS  GPYKP  YRY
Sbjct:  320 TTGNRDIIRHEHMVAMKNEAIVCNIGHFDNEIDVASIEQYQWEE---IKPQVDHITFPDGKK-IILLAKGRLVNLGCATGHPSFVMSASFANQTIAQIELFTKPDA--YEVGKVYVLPKILDEKVARLHLKKVGAMLTELTDGQAAYIGVSKQGPYKPETYRY 476          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.489e-42
Identity = 92/162 (56.79%), Postives = 113/162 (69.75%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKD+I +DHM+ MK+ AIV NIGHFDNEI+V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +    +Y  +VY+LPKHLDEKV           LT L++EQA YI VS  GP+K  HYRY
Sbjct:  311 TTGNKDVIRIDHMRAMKDMAIVGNIGHFDNEIEVAALRN---LKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKPD--QYSNQVYILPKHLDEKVARLHLDKLGVKLTELSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.489e-42
Identity = 97/161 (60.25%), Postives = 108/161 (67.08%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGNK++I  +HM  MK+ AIVCNIGHFDNEIDV  LE    +K   IKPQ D  VFP+    I +LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  KS      KVYVLPKHLDEKV           LT LT EQA YI VS  GPYK   YRY
Sbjct:  322 TGNKNVIRYEHMAAMKDEAIVCNIGHFDNEIDVASLEK---LKWDEIKPQVDHVVFPDGKK-ITLLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF-TKSADYQVGKVYVLPKHLDEKVARLHLKKVGAMLTELTDEQAAYIGVSKSGPYKADTYRY 477          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BARHE (Adenosylhomocysteinase OS=Bartonella henselae GN=ahcY PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.489e-42
Identity = 92/162 (56.79%), Postives = 113/162 (69.75%), Query Frame = -3
Query:  296 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 781
            TTGNKDI+ +DHM+K+K+  I+ NIGHFDNEI V  L+  P      IKPQ D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+EL+    +G Y+ +V VLPK+LDEKV           LT L++EQA YI V+  GPYKP HYRY
Sbjct:  310 TTGNKDIVRLDHMRKVKDMCILGNIGHFDNEIQVAALQNLPWTN---IKPQVDMITFPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELFTR--SGHYKNEVTVLPKYLDEKVARLHLDQLGIKLTTLSQEQAAYIGVTPQGPYKPDHYRY 465          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_GRABC (Adenosylhomocysteinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.109e-41
Identity = 89/161 (55.28%), Postives = 109/161 (67.70%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN D+I +DHM+ MKN AIVCNIGHFD+EI +  L  Y   +   +KPQ D  VFP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW+ K        VY LPKHLDEKV           LT+L+ +QA+YI VS  GP+K   YRY
Sbjct:  284 TGNVDVITIDHMRAMKNRAIVCNIGHFDSEIQIESLRNY---RWENVKPQVDEVVFPD-GKRLIILSEGRLVNLGNATGHPSFVMSASFTNQVLAQIELWQAKPGQYLPNHVYTLPKHLDEKVAALHLAKVGAKLTKLSDKQAEYIGVSQAGPFKHDLYRY 440          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BORPE (Adenosylhomocysteinase OS=Bordetella pertussis GN=ahcY PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.109e-41
Identity = 92/161 (57.14%), Postives = 111/161 (68.94%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I   HM+ MK+ AIVCNIGHFDNEIDV GLE     +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  ++      +VYVLPKHLDEKV           L+ L+K+QADYI V  +GP+KP HYRY
Sbjct:  317 TGNYHVITRQHMEAMKDQAIVCNIGHFDNEIDVAGLENCQWEE---IKPQVDHVIFPD-GKRIILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF-TRNEAYTTGQVYVLPKHLDEKVARLHLKKLGVKLSTLSKQQADYIGVPVEGPFKPDHYRY 472          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BORPA (Adenosylhomocysteinase OS=Bordetella parapertussis GN=ahcY PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.109e-41
Identity = 92/161 (57.14%), Postives = 111/161 (68.94%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I   HM+ MK+ AIVCNIGHFDNEIDV GLE     +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  ++      +VYVLPKHLDEKV           L+ L+K+QADYI V  +GP+KP HYRY
Sbjct:  317 TGNYHVITRQHMEAMKDQAIVCNIGHFDNEIDVAGLENCQWEE---IKPQVDHVIFPD-GKRIILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF-TRNEAYTTGQVYVLPKHLDEKVARLHLKKLGAKLSTLSKQQADYIGVPVEGPFKPGHYRY 472          
BLAST of CX043270 vs. ExPASy Swiss-Prot
Match: SAHH_BORBR (Adenosylhomocysteinase OS=Bordetella bronchiseptica GN=ahcY PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.109e-41
Identity = 92/161 (57.14%), Postives = 111/161 (68.94%), Query Frame = -3
Query:  296 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 778
            TGN  +I   HM+ MK+ AIVCNIGHFDNEIDV GLE     +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  ++      +VYVLPKHLDEKV           L+ L+K+QADYI V  +GP+KP HYRY
Sbjct:  317 TGNYHVITRQHMEAMKDQAIVCNIGHFDNEIDVAGLENCQWEE---IKPQVDHVIFPD-GKRIILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF-TRNEAYTTGQVYVLPKHLDEKVARLHLKKLGAKLSTLSKQQADYIGVPVEGPFKPGHYRY 472          
The following BLAST results are available for this feature:
BLAST of CX043270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
SAHH_CORGB4.976e-4258.39Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_BURTA4.976e-4257.14Adenosylhomocysteinase OS=Burkholderia thailandens... [more]
SAHH_DELAS6.499e-4260.12Adenosylhomocysteinase OS=Delftia acidovorans (str... [more]
SAHH_RHIL38.489e-4256.79Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_METPP8.489e-4260.25Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_BARHE8.489e-4256.79Adenosylhomocysteinase OS=Bartonella henselae GN=a... [more]
SAHH_GRABC1.109e-4155.28Adenosylhomocysteinase OS=Granulibacter bethesdens... [more]
SAHH_BORPE1.109e-4157.14Adenosylhomocysteinase OS=Bordetella pertussis GN=... [more]
SAHH_BORPA1.109e-4157.14Adenosylhomocysteinase OS=Bordetella parapertussis... [more]
SAHH_BORBR1.109e-4157.14Adenosylhomocysteinase OS=Bordetella bronchiseptic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A03-B6-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043270 ID=CX043270; Name=CX043270; organism=Citrus sinensis; type=EST; length=783bp
GTAAACAATAAGGATAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACT
GCATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAA
ATCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAA
CTTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCC
TACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTC
TTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACC
TGTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCA
GCCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTG
AAGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCT
TCTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATC
ACCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGC
ACATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGT
TGGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGC
TTAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAA
GTGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGT
CAACCATGATGATGTCCTTGTTACCGGTGGTGG
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