EY679013

Overview
NameEY679013
Unique NameEY679013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER1_MAIZE (Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.725e-41
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 2
Query:   68 STSFIRSKPTATSLKAMPNMGQAMFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 472
            S+S +R+ P  T++ A+P     + G  A+   R+ A ATY VKLITP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG+VDQS+QS+LDD Q+ +G+VLTC AYPTSDV IETHKEEEL G
Sbjct:   16 SSSSLRAAPAPTAV-ALPAAKVGIMGRSASSRRRLRAQATYNVKLITPEGEVELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSDVVIETHKEEELTG 149          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER1_PHYES (Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.331e-39
Identity = 73/96 (76.04%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  182 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 469
            ATYKV L+TP G + I+CPDDT++LDAAEEAGLDLPYSCRAG+CSSC GKV +GTVDQ +QSFLDDDQ+  GFVLTC AYP  DVTIETHKEE++A
Sbjct:    1 ATYKVTLVTPSGTQTIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCAGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAYPKGDVTIETHKEEDIA 96          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER_WHEAT (Ferredoxin, chloroplastic OS=Triticum aestivum GN=PETF PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.351e-39
Identity = 76/106 (71.70%), Postives = 87/106 (82.08%), Query Frame = 2
Query:  149 KANRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 466
            K  RG R+ A ATYKVKL+TP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GK+VSG +DQS+QSFLDDDQM  G+VLTC AYP SD+ IETHKEEEL
Sbjct:   36 KQVRGARLRAQATYKVKLVTPEGEVELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEAGWVLTCHAYPKSDIVIETHKEEEL 141          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.683e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  182 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 472
            ATYKVKL+TP G  E NCPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.683e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  182 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 472
            ATYKVKL+TP G  E NCPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.422e-39
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  179 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 466
            MA+Y VKLITP GE  I C DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ +G+VDQS+QSFLDDDQ+  G+VLTC AYPTSD TIETHKEE+L
Sbjct:    1 MASYTVKLITPDGENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.422e-39
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  179 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 466
            MA+Y VKLITP GE  I C DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ +G+VDQS+QSFLDDDQ+  G+VLTC AYPTSD TIETHKEE+L
Sbjct:    1 MASYTVKLITPDGESSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.422e-39
Identity = 76/95 (80.00%), Postives = 82/95 (86.32%), Query Frame = 2
Query:  182 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 466
            ATYKV L TP G++ I CPDDT+ILDAAEEAGLDLPYSCRAGACSSC GKV +GTVDQS+QSFLDD QM  GFVLTC AYPTSD TI THKEE+L
Sbjct:    1 ATYKVTLKTPSGDQTIECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDL 95          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER1_PHYAM (Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.422e-39
Identity = 72/95 (75.79%), Postives = 84/95 (88.42%), Query Frame = 2
Query:  182 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 466
            ATYKV L+TP G + I+CPDDT++LDAAEEAGLDLPYSCRAG+CSSCTGKV +GTVDQ +QSFLDDDQ+  GFVLTC A+P  DVTIETHKEE++
Sbjct:    1 ATYKVTLVTPSGTQTIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCTGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAFPKGDVTIETHKEEDI 95          
BLAST of EY679013 vs. ExPASy Swiss-Prot
Match: FER_DATME (Ferredoxin OS=Datura metel PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.693e-39
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  182 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 472
            ATYKVKL+TP G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +GTVDQS+ ++LDDDQM EGFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEELTG 97          
The following BLAST results are available for this feature:
BLAST of EY679013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER1_MAIZE2.725e-4162.22Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE... [more]
FER1_PHYES3.331e-3976.04Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1[more]
FER_WHEAT4.351e-3971.70Ferredoxin, chloroplastic OS=Triticum aestivum GN=... [more]
FER_DATST5.683e-3976.29Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU5.683e-3976.29Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER_SYNY47.422e-3977.08Ferredoxin OS=Synechocystis sp. (strain PCC 6714) ... [more]
FER_SYNY37.422e-3977.08Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803... [more]
FER_SCEQU7.422e-3980.00Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1[more]
FER1_PHYAM7.422e-3975.79Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1[more]
FER_DATME9.693e-3976.29Ferredoxin OS=Datura metel PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-A11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679013 ID=EY679013; Name=EY679013; organism=Citrus sinensis; type=EST; length=828bp
CAAAACTCAACTGTCCCTTCCTTGAGCAAGAGCAACAACAATGGCCACCC
TCTCAAGCGCCATGGTAAGCACCTCATTCATCAGAAGCAAGCCTACAGCG
ACCAGCCTCAAAGCCATGCCTAACATGGGTCAGGCTATGTTTGGCCTCAA
AGCCAACAGAGGTGGCCGTGTTGTAGCCATGGCTACATACAAAGTCAAGC
TCATTACACCTGGGGGAGAGGAAGAAATCAACTGTCCTGATGACACGTTT
ATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAG
GGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTG
ACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAATGGGAGAAGGTTTT
GTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAGAGACTCA
CAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCTTGATATCTCATTAT
TAACTTCCTCTTTTATGTGTTGGGTTTTGTCTGATTAATTTTAATGCTTT
GAAAGGGATATTGAGTAATTTGAAGAATGATTCTTGTAATGTGGTTTTAT
TTCTTGTTGCAAAAAATTTGTAATTGGCACCGGGCATGAATGGCCTTCGA
ACCAAAAGGGTGAGGTTTCTCTTCCCCTCCCAAAAAGGGACCGTTTCATA
TATTAAAAACCAACAAAAAACAAAGGGATTTTTCTTTGGATTTCCTAGGA
ATTTTTTAAACAAATGGATTGGTTGTTTCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAGGGGGGGGCGGCCTATAAG
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