EY665388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_METTH (30S ribosomal protein S13P OS=Methanobacterium thermoautotrophicum GN=rps13p PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.585e-23 Identity = 47/122 (38.52%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 88 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 E+F+H++R+ ++DG + + ALTSIKG+G+ L+ + A D+N+R G LS E++ L + NP ++ IP W +NR+ DY+ G+ ++ + L+M LR+DL R+ K R+++G RH G Sbjct: 3 EEFKHMVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAIKNPAKYNIPSWMINRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELG 124
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_METS3 (30S ribosomal protein S13P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps13p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.021e-22 Identity = 47/122 (38.52%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 88 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 +DF+H++R+ +VDG + I ALT IKG+G L+ +C+ D+D + G ++ ++ + ++ NP++F IP+W LNR++DY+ G+ ++ + LDM LRDDL R++K R+++G RH G Sbjct: 3 DDFKHLVRISRKDVDGNKTIEQALTEIKGVGISLSTTMCRTLDLDSEAQIGYIADEDVLKIEEILENPQKFNIPNWMLNRREDYETGENIHLIESDLDMTLRDDLNRMKKTRSYKGRRHEAG 124
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_METJA (30S ribosomal protein S13P OS=Methanocaldococcus jannaschii GN=rps13p PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 6.621e-22 Identity = 53/145 (36.55%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 85 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWGPSCPWDNTP-----GPRVVVGK 504 N +F++++RV T++DG +K++ AL I G+G +A + + A +D NK AG L+ E+ + V+A+P +F IP W NR+KDY G+ V+ + L + ++D+ RL++IR +RG+RH G C T GP V V + Sbjct: 3 NSEFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRGQRTKSTFRRGPTVGVSR 147
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_PYRHO (30S ribosomal protein S13P OS=Pyrococcus horikoshii GN=rps13p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.475e-21 Identity = 48/121 (39.67%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 91 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 DF+HI+RV ++DG +++ +ALT+IKG+G A +VC+ A +D +AG L+ ++ + ++ +P IP W +NR KDY+ GK +++ LDM +R+D+ RL +IR +RG+RH G Sbjct: 3 DFRHIVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVSHGIPRWAVNRPKDYETGKDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELG 123
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_PYRFU (30S ribosomal protein S13P OS=Pyrococcus furiosus GN=rps13p PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.286e-21 Identity = 48/121 (39.67%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 91 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 +F+HI+RV ++DG +++ +ALT+IKGIG A +VC+ A +D +AG L+ ++ + ++A+P IP W +NR KDY+ G+ +++ LDM +R+D+ RL +IR +RG+RH G Sbjct: 3 NFRHIVRVAGVDLDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILADPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELG 123
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_PYRAB (30S ribosomal protein S13P OS=Pyrococcus abyssi GN=rps13p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 4.291e-21 Identity = 47/121 (38.84%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 91 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 DF+HI+RV ++DG +++ +ALT+IKG+G A +VC+ A +D +AG L+ ++ + ++ +P IP W +NR KDY+ G+ +++ LDM +R+D+ RL +IR +RG+RH G Sbjct: 3 DFRHIVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELG 123
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_METKA (30S ribosomal protein S13P OS=Methanopyrus kandleri GN=rps13p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 4.291e-21 Identity = 48/127 (37.80%), Postives = 84/127 (66.14%), Query Frame = 1 Query: 79 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNL--MVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 +A+++ + I+R+ + ++DG +K+ +ALT IKGIG R+A +C++ +D K+ GELS E++ + + + + IP W NRQKDY+ G+ +V L+M ++ D++RL+KIR +RG+RH G Sbjct: 1 MADDEVKPIVRIADVDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEIKKLSEGESNIPSWMYNRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELG 127
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_HYPBU (30S ribosomal protein S13P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps13p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.249e-20 Identity = 48/126 (38.10%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 76 LVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 +++ + +++I+R+L T++ G K+ + L +KGIG LA +C+ +D NKR G L+ AE++ + +ANP IP W LNR+KDY+ GK +V L ++ D+ER ++IR+ RG+RH G Sbjct: 1 MLSEQQYRYIVRILGTDIPGDLKVPYGLALVKGIGVNLAYALCRLLGIDPNKRIGFLTDAEIEKIEKAMANPLAIGIPVWMLNRRKDYETGKDLHLVGADLIYYVKRDIEREKRIRSWRGIRHALG 126
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_PICTO (30S ribosomal protein S13P OS=Picrophilus torridus GN=rps13p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.633e-20 Identity = 45/123 (36.59%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 85 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 NE+FQ+I+R+ N +++G++ + AL +KGIG RL+ + KK D+D ++R GEL +++ L + IP W N ++D GK +VSN LD+++ DD+ ++K+R+++G+RH G Sbjct: 8 NENFQYIVRIANKDLNGERPLKLALADLKGIGLRLSETIAKKLDLDPDQRIGELGEDKIEELRKYIEGKVYDGIPYWMYNHRRDITTGKDFNLVSNDLDLQINDDINLMKKMRSYKGIRHERG 130
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_PYRKO (30S ribosomal protein S13P OS=Pyrococcus kodakaraensis GN=rps13p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.745e-20 Identity = 48/122 (39.34%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 88 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 E+F+HI+RV ++DG +++ +ALT IKGIG A +V + A +D +AG L+ ++ + ++A+P IP W +NR KDY+ GK +++ L M R+D+ RL +IR +RG+RH G Sbjct: 3 ENFRHIVRVAGVDIDGHKQVRWALTGIKGIGINFATMVLRVAGIDPFMKAGYLTDEQVKKIEEILADPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELG 124 The following BLAST results are available for this feature:
BLAST of EY665388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665388 ID=EY665388; Name=EY665388; organism=Citrus sinensis; type=EST; length=1022bpback to top |