EY665388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_NATPD (30S ribosomal protein S13P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps13p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.604e-18 Identity = 45/123 (36.59%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 85 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 +ED Q+ +R+ T++DG + + ALT + GIGRR+A I+ +KA+VD G L ++D+++ V ++P+W N QKD+ G+ + + N L M R D+ R++KI +RG+RH G Sbjct: 12 DEDLQYFVRIGQTDLDGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVVAAVEEYGD-EVPEWLTNHQKDFFTGETTHEIGNDLQMSRRQDINRMKKIDAYRGVRHKRG 133
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_SULTO (30S ribosomal protein S13P OS=Sulfolobus tokodaii GN=rps13p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.053e-18 Identity = 42/122 (34.43%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 88 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 + F++I+R+ +VDG K+ +AL +KGIG A + K +D ++R GELS ++ + + + + ++P+W NR+KDY+ G +V++ L +R+D+ER +KI++ RG+RH G Sbjct: 5 QQFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKIENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSLG 126 HSP 2 Score: 22.7126 bits (47), Expect = 4.053e-18 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 468 GQHTRTTGRRG 500 GQ TRTTGR G Sbjct: 131 GQRTRTTGRTG 141
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_METBF (30S ribosomal protein S13P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps13p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.070e-18 Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 85 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 NE+ +H++R++NT++ G + + +ALT + GIGRR A ++ K A VD G L E+ L + N +P W LNRQKD G+ ++ + + R+D+ L+K+R +RGLRH G Sbjct: 17 NEEIRHLVRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAIGNFEGI-VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERG 138 HSP 2 Score: 22.7126 bits (47), Expect = 4.070e-18 Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQ T++TGRRG + S +K Sbjct: 143 GQRTKSTGRRGSTVGVSRRK 162
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_ARCFU (30S ribosomal protein S13P OS=Archaeoglobus fulgidus GN=rps13p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.357e-17 Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 94 FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 F+HI+R+ +T++DG + +MFALT IKGIG R A + + VD + GEL ++ + V + +P W LNR+KD G+ ++S +D D+ERL K++ +RG+RH G Sbjct: 3 FKHIVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFVEEEIE-SLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARG 121 HSP 2 Score: 23.0978 bits (48), Expect = 4.357e-17 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 468 GQHTRTTGRRGK 503 GQ TR+TGR+G+ Sbjct: 126 GQRTRSTGRKGR 137
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_METBU (30S ribosomal protein S13P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps13p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.243e-16 Identity = 42/125 (33.60%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 79 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 +A+E+ +H++R++NT++ GK+ + +ALT I+GIG R + ++ +D N G LS ++ L + + + ++P W LNRQ D G+ ++ + + L++DL L+K R +RGLRH G Sbjct: 1 MADEEIRHLVRIMNTDLQGKKPVKYALTGIRGIGLRTSRVIVDSTGIDPNAVIGYLSDEDIKKLDSTI-DKFEEQLPKWMLNRQFDPLTGENKHLLGQDIILTLKEDLNDLKKSRAYRGLRHERG 124 HSP 2 Score: 22.3274 bits (46), Expect = 1.243e-16 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 468 GQHTRTTGRRG 500 GQ T++TGRRG Sbjct: 129 GQRTKSTGRRG 139
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_AERPE (30S ribosomal protein S13P OS=Aeropyrum pernix GN=rps13p PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.243e-16 Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 76 LVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 + F++I+R+ ++DG K+ + L SIKGIG A V + +D K+ G L+ E+ L V+ + Q +P W NR+KDY+ GK ++ + L R D+ER KI + RG+RH +G Sbjct: 1 MAGETSFKYIVRIAGVDIDGDLKLPYGLASIKGIGYTTAMAVIRMLGLDPEKKVGFLTEEEIRRLDEVLRDITQLGLPKWLYNRRKDYETGKDLHLIGSELIFYARRDIEREMKIGSWRGIRHKYG 126 HSP 2 Score: 22.3274 bits (46), Expect = 1.243e-16 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 468 GQHTRTTGRRG 500 GQ TRTTGR G Sbjct: 131 GQRTRTTGRLG 141
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_METHJ (30S ribosomal protein S13P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps13p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.437e-16 Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 85 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 +++ + +RV NT++DG + ++ +LT IKG+GR A + + A V+ N G+L A +D + VV+N +IP W NR KD G ++ + M + DD+ L+KIR +RG+RH G Sbjct: 5 DQEINYFVRVHNTDLDGTKPVLISLTGIKGVGRHTAKFIAETAGVEKNVLMGKLDEASVDRIREVVSNYAD-RIPVWMSNRPKDVYTGVKRHLLGADVTMTVDDDINLLKKIRAYRGIRHETG 126
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_METMP (30S ribosomal protein S13P OS=Methanococcus maripaludis GN=rps13p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.090e-16 Identity = 40/131 (30.53%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 91 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWGPSCPWDNTPG 483 +F+H +R+ T+++GK + +AL +KGIGR +A V + ++D ++AG L+ ++ + V+ +P IP W NR+KD G ++ L + +++D+ ++KIR ++G+RH C T G Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRGQRTRG 135
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_HALMA (30S ribosomal protein S13P OS=Haloarcula marismortui GN=rps13p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.209e-15 Identity = 43/122 (35.25%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 88 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 ED ++ +R+ T++DG + + ALT + GIG R A I+ +KADVD G+L ++ ++ V N +P+W N QKDY G+ + N L + R D+ R++ I ++RG+RH G Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRG 138
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS13_THEPD (30S ribosomal protein S13P OS=Thermofilum pendens (strain Hrk 5) GN=rps13p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.881e-15 Identity = 40/121 (33.06%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 91 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 +F++I+RV ++ G + +++AL IKGIG A V KK +D + G LS E++ L + + +P W LNR+KD G ++++ L + +R+D+E ++KI++++G+RH G Sbjct: 4 EFRYIVRVAGVDLPGDKALVYALADIKGIGVSTAQAVAKKLGLDPYRLLGTLSEEEVEKLSAALREIEKLGLPPWMLNRRKDPFLGVDRHLITSDLLITVRNDIEFMKKIKSYKGVRHMLG 124 HSP 2 Score: 22.7126 bits (47), Expect = 2.881e-15 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 3 Query: 468 GQHTRTTGRRG 500 GQ TRTTGR G Sbjct: 129 GQRTRTTGRTG 139 The following BLAST results are available for this feature:
BLAST of EY665388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665388 ID=EY665388; Name=EY665388; organism=Citrus sinensis; type=EST; length=1022bpback to top |