EY665387

Overview
NameEY665387
Unique NameEY665387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1071
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: PTH_ALKOO (Peptidyl-tRNA hydrolase OS=Alkaliphilus oremlandii (strain OhILAs) GN=pth PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.393e-11
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 1 
Query:  247 LIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 426
            +IVGLGNPG KY  TRHN+GF+ ID +A+   I +  ++ KAL G G+IG   +LL KPQ
Sbjct:    3 IIVGLGNPGKKYDATRHNIGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVKPQ 62
The following BLAST results are available for this feature:
BLAST of EY665387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PTH_ALKOO7.393e-1153.33Peptidyl-tRNA hydrolase OS=Alkaliphilus oremlandii... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-C12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665387 ID=EY665387; Name=EY665387; organism=Citrus sinensis; type=EST; length=1071bp
AACCAACACAAGCAGAAACGTTATACCGCCTCGAACTGAGCTCTGCCACG
CCTCTGTTCTTTCATCGTTGTGTCTTAGAAACCCAAGAATAGGTCAATGT
TGTATGCACTCTCTGCCCCAAAAACTTGCATTTCCTGTCCGAGAGGGCCT
CCCTTTCCTCAAAAGCGTCAAGTTTCAACAAGGCTTTGTGTGCATGCTTC
GTTGCCAGATGATAATGGTGGATTTAAAGTGGAGTATACACCTTGGTTGA
TTGTCGGATTGGGTAACCCTGGGATTAAGTACCACGGCACTAGGCACAAT
GTTGGATTTGACATGATTGATCACATTGCTCAAGCGCAACGCATTGCTAT
GAACACAATACAGTCAAAGGCTTTAATTGGAATAGGTTCCATTGGAGAGG
TGCCGATTTTGTTGGCAAAACCTCAGGCATAACTGAAATTTCAGTGGGGA
ATCGGCCGGGCCTCTTGGCTGCACTTTATCAAGTACCGCTGCTTCACTTT
TTATTGATCTAGGAGAAATGAATTTAAGGAAATGGGGTTCCCAAACTTCG
ACAAAAAGGAAGGCATGGGCCTACAAAGGGGTTAAAAATGGGATAAACCA
CCTGGAGGGTTGCAGGGAGTTCCCCACGAGGGCAAAGTATGGGAAACCAC
ATGGAAAAAGGGATAAAAGTTTAGTTCAACCGAATATCAACCCACTGAAG
CGGGACACATTTGTCCGCCCATGACAAAGAGAGTAAAACCAGAAACACTA
TAGCGCAAGAGATATAACAGAATGTTGACAAGTTAGCGGGGAAAGGAATC
ACGACACGAAGGTGGAAGGAGACAGAGAAGAATAGAGAGAAAGAGATAAA
AGACAGAAGAAGGAACAAGCGATGGTAAAAAAAAAATTGTACAACACAAT
ATAATGTACAAATACGAAAAAAAAATGACAGGATAAAAACTGCGAGAGCC
AAAGACGATGAAAACGAAAAACACTATAGATCATGAAAATAATAAAAAGA
CAAAGAAGGGATAACAGGAAATAAAAAGAGAAAANAAAGGAACAAAAATA
AACCACAGCAAACAACAAAAC
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