FC871878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_YEAST (60S ribosomal protein L32 OS=Saccharomyces cerevisiae GN=RPL32 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.015e-26 Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 SDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 316 SDR V ENWR+ KGIDS VRR+F+G + P IGYGS+KKT+ P+G K F+V NV +LE L MH +TY AEIAHN+S K R I+ RA L + VTN RL Sbjct: 22 SDRYHRVAENWRKQKGIDSVVRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTNPKGRL 126
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_CANAL (60S ribosomal protein L32 OS=Candida albicans GN=RPL32 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.750e-25 Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 2 Query: 2 SDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 316 SDR V ENWR+ KGIDS VRR+F+G + PNIGYGS+KKT+ P G+K ++V NV +L++L++H ++Y AEIA +VS++KR EIV +A +L V VTN +L Sbjct: 23 SDRYHRVAENWRKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKL 127
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_CANGA (60S ribosomal protein L32 OS=Candida glabrata GN=RPL32 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.935e-24 Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 SDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 316 SDR V ENWR+ KGIDS VRR+F+G + P IGYGS+KKT+ P+G K +V N+ +LE L MH ++Y AEIAHNVS+K R ++ RA L V VTN RL Sbjct: 23 SDRYHRVSENWRKQKGIDSVVRRRFRGNISEPTIGYGSNKKTKFMSPSGHKVVLVSNLKDLETLTMHTKSYAAEIAHNVSSKNRVTLLARAKALGVKVTNAKGRL 127
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_ENCCU (60S ribosomal protein L32 OS=Encephalitozoon cuniculi GN=RPL32 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.174e-21 Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 2 SDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 334 SDR VK +WRRP GIDS+VR++ KG MP+I Y K+ RH LPNG +K + N+N+L L NR YC EIAH V +KR IV RA +L + + N ARL + EE Sbjct: 29 SDRYKRVKPSWRRPHGIDSKVRKRCKGEREMPSIKYKKPKEIRHLLPNGLRKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKRIAIVNRAKELGICLLNGNARLIPEIEE 139
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_PYRFU (50S ribosomal protein L32e OS=Pyrococcus furiosus GN=rpl32e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.257e-15 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 32 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 301 WRRPKGIDS++R K KG P+IG+ S K R P+G+++ +VHNV ELE L + A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYEEVLVHNVKELEAL--DPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLN 127
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_PYRHO (50S ribosomal protein L32e OS=Pyrococcus horikoshii GN=rpl32e PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 32 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 301 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ ++HNV ELE L R A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELERL--DPRRQAARIAHTVGKKKRIEILKRAEELGIKVLN 127
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_PYRAB (50S ribosomal protein L32e OS=Pyrococcus abyssi GN=rpl32e PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 32 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 301 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ ++HNV ELE L + A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELEKL--DPKRQAARIAHTVGKKKRIEILKRAQELGIKVLN 127
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_METKA (50S ribosomal protein L32e OS=Methanopyrus kandleri GN=rpl32 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 26 ENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 301 E WRRPKG S++RRK K MPN GYGS KK R P+G+++ +V+N +LE + + A IA V +KR+EI+E+A +L +VV N Sbjct: 41 EKWRRPKGRHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDLE--KIDPKRQAARIASRVGRRKRQEILEKAEELGIVVLN 130
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_TRIHA (60S ribosomal protein L32 OS=Trichoderma harzianum GN=rpl32 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 SDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELL----MMHNRTYCAEIAHNVSTKKR 253 SDR V +WR+PKGID RVRR+F+G + MP IGYGS+KKTR P+G F +HN L M AEIA VS++KR Sbjct: 23 SDRFDRVGSSWRKPKGIDGRVRRRFRGTIRMPKIGYGSNKKTRFLTPSGHNAF-LHNARTLSCAAGCSMQSTDPSAAEIATPVSSRKR 109
BLAST of FC871878 vs. ExPASy Swiss-Prot
Match: RL32_THESM (50S ribosomal protein L32e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl32e PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 32 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 301 WR+PKG DS++R K KG P+IG+ S K R P+G+++ +V+NV +LEL+ ++ A IA V KKR I+ERA +L + V N Sbjct: 38 WRKPKGTDSKMRVKLKGKARSPSIGWSSPKAVRGLHPSGYEEVLVYNVKDLELI--DSKRQAARIAATVGKKKRIMIIERARELGIKVLN 125 The following BLAST results are available for this feature:
BLAST of FC871878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871878 ID=FC871878; Name=FC871878; organism=Citrus sinensis; type=EST; length=742bpback to top |