EY665382

Overview
NameEY665382
Unique NameEY665382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665382 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.271e-14
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 1
Query:  112 LERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIVE 402
            +E G  T +S+V+S G+V+LELLTGR+  D   P+  + L +W+ P L D   L+ ++DP L G +P+K+    ADI  R LQ EP  RP +  IV+
Sbjct:  666 VEYGSYTCQSDVFSLGVVMLELLTGRRPFDRTRPRGHQTLAQWAIPRLHDIDALTRMVDPSLHGAYPMKSLSRFADIISRSLQMEPGFRPPISEIVQ 762          
BLAST of EY665382 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 1
Query:  121 GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIVE 402
            G L+ KS+V+SFG+VLLELLTGRK +D   P+ +++LV W+ P L++D ++   +D +L   +P KA   +A +A  C+Q E   RP M  +V+
Sbjct:  250 GQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSED-KVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVK 342          
BLAST of EY665382 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.627e-12
Identity = 36/91 (39.56%), Postives = 64/91 (70.33%), Query Frame = 1
Query:  127 LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIV 399
            L+ KS+V+SFG+VLLE+++GR+ L+ + P+ E +LV+W++P++    ++  I+DP +KG +  +A   V ++AL+CL+   + RP M  IV
Sbjct:  775 LSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRAS-KVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIV 864          
BLAST of EY665382 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.125e-12
Identity = 36/91 (39.56%), Postives = 64/91 (70.33%), Query Frame = 1
Query:  127 LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIV 399
            L+ KS+V+SFG+VLLE+++GR+ L+ + P+ E +LV+W++P++    ++  I+DP +KG +  +A   V ++AL+CL+   + RP M  IV
Sbjct:  776 LSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRAS-KVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIV 865          
BLAST of EY665382 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.008e-11
Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 1
Query:  136 KSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIVE 402
            KS+ ++ G++LLELLTGRK  DS  P+ E+ LVKW+   L D   L  ++D  + G F  + A   ADI   C Q E   RP +  IVE
Sbjct:  601 KSDTYALGVLLLELLTGRKAFDSSRPRGEQLLVKWASTRLHDRRSLEQMIDGGIAGTFSSRVASQYADIISLCTQAEKEFRPPVSEIVE 689          
BLAST of EY665382 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.929e-11
Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 1
Query:   10 DFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXQTLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 396
            +F+AKLS +G A  +   +                E    GLL  KS+++SFG++LLE +TGR  +D   P  E NLV+W +  +    R   ++DP+L+ R    A +    ++LRC+  E  +RP M  +
Sbjct:  320 EFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLK-MMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQV 450          
The following BLAST results are available for this feature:
BLAST of EY665382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
SUB_ARATH2.271e-1442.27Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
PTI1_SOLLC3.279e-1342.55Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
NORK_PEA1.627e-1239.56Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR2.125e-1239.56Nodulation receptor kinase OS=Medicago truncatula ... [more]
SRF2_ARATH4.008e-1142.70Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
Y2296_ARATH8.929e-1131.82Probable receptor-like protein kinase At2g42960 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665382 ID=EY665382; Name=EY665382; organism=Citrus sinensis; type=EST; length=1018bp
AGTTGACAAGATTTTAGTGCGAAGCTTTCAGGATATGGTTGTGCTGGTCA
TATTCCTGAGACTGATATCTCTAATAGTTCGGTGGCTGCGGCAAATCTTT
CAGTACAGACATTGGAGAGAGGACTGCTGACTCCTAAGAGCAATGTTTGG
AGTTTTGGAATTGTTCTTCTTGAGCTACTCACAGGCCGCAAGAATCTTGA
CAGCCGCCATCCCAAGGAAGAAAGGAACTTGGTTAAGTGGAGCCGGCCTT
TCCTGGCTGATGACTGCCGACTCTCACTCATCATGGATCCTCAGCTAAAG
GGCCGCTTCCCATTGAAAGCAGCCAGGACAGTGGCTGATATTGCTCTAAG
GTGTCTACAAAAGGAACCATCAGAACGACCTACCATGAGAAGCATCGTTG
AATAATCTCAAAACCATACAAGACATGAGATACCATTTGCCGCTATCCTC
TACCAGAAGCCAGCAGTAATTGCGGGTAACAAATGTCACGATCCCCAGCC
TCAATGGGGATCTTTGCCCCAGCCCCCAAAATTAATTTTTTCCCCCTCCC
CCCCATCAGGGAGCCCCAACCTTCTTTTTCCCCCGAAAAGAACCCCTTGG
CCCGGCCATTTGCCCTTTCCCCCCGGGAGGTTTGGTCCCCCCCCTGGCCC
CCTTCCAAGGAATTTAAAAAAGGGCAAAAAAAACCCGGAAAATTTTTTTT
TCTTTCCACCTTGTTTCAACGGGGCCCCGGTGGTTGAAGGGTTTTTTAAG
GGGTTTAAAAAAAGCATTTTTTTTTCCTTTTTTTTTTTTTGTTCCTTTTT
TGGGGTTGGTACCACCCCAATTTAAAAAAAAAAAAAAAAGGGAGGGGGGG
GGGGGGGCTTCCCCCCTTTTGGCCCTTTTCCCCCCCGGGGTGTTTTAAAA
GAATTTTGTGAAGGGGGAGGGGGTGTTTTTTTTTGGAAAAAAATAGGAGG
GGGGTTTTAAAAGTGGAAAAGACCTTTTATTTTTTTTTTGTGTTCTTTCC
CAAAAAAAAAAAAAAGAA
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