CV885255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 3.008e-70 Identity = 122/249 (49.00%), Postives = 171/249 (68.67%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M K Y L LEHY V DLLGR G L+EA I M V+ +W TLLS+C +HK+ ++A ++AE++ ++ + YVL+ N++AS RW+ +++LR MR++ ++K+P SW+E+KN+ H F GD+SHPS +I+ +L+ + +M+ GYV DT +HD+D E K L HSE+LA+AF ++NT G IRV KN+R+C+DCHVAIK+IS I REIIVRD SRFHHF G CSCGDYW Sbjct: 467 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 6.702e-70 Identity = 122/246 (49.59%), Postives = 166/246 (67.48%), Query Frame = -2 Query: 123 MVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 860 ++KK + P HY VVDLLGR G L+ A I MP++ IWK LL+AC++HK+T++ AE V +L+P D P+V+L NI+AS RW + +R+ M+E VKKEP SW+EI+N +H F D+ HP EI EE+ +++K GYVPDT + +D +E+E NL++HSEK+A+AFAL+NTP G I + KN+RVC DCH AIK S + REIIVRD +RFHHF++G CSC DYW Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 6.702e-70 Identity = 117/249 (46.99%), Postives = 168/249 (67.47%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F M K Y + P EHY C++DLLG+ G LD+A L+ M + D + W+TLL AC++ ++ +A A++V+ L+P DA Y LLSNI+A++++W V E+R MR+R +KKEPG SW+E+ Q+H F +GD SHP +E+ L +L + GYVP+T + D++ E+ E +L+HHSEKLA+AF LM P IR+ KNLR+C DCHV K S ++ R I++RD R+HHF++GKCSCGDYW Sbjct: 382 FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 263.848 bits (673), Expect = 8.753e-70 Identity = 116/249 (46.59%), Postives = 171/249 (68.67%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F +M ++Y +KPRLEHY+C+V+LLGR G L EA LI+ MP + D+ +W LL++C++ + D+A AE++ L P + YVLLSNI+A+ W V +R M +KK PG SW+++KN+V+ GDKSHP +I ++E++ EM+ G+ P+ +HD++ +E+E L HSEKLA+ F L+NTP G P++V+KNLR+C DCH IK+IS+ REI +RD +RFHHF++G CSCGD+W Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP406_ARATH (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.493e-69 Identity = 115/249 (46.18%), Postives = 170/249 (68.27%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ ++KK+ ++P ++HYTC+V LL + G +AE +R P++ D + W+TLL+AC + ++ + ++AE ++ P D+ YVLLSNIHA ++ W+GV+++R M R VKKEPGVSW+ I+NQ H F D HP I ++E+ S++K GY PD HD+D E++E NL +HSEKLA+A+ L+ TP P+ V KN+R+C DCH AIK IS I R I++RD++RFHHF +G+CSC DYW Sbjct: 462 FNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.547e-69 Identity = 125/250 (50.00%), Postives = 167/250 (66.80%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGD-KSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M K+ + P +EHY+C VD+LGR G +D+A LI +M +K D +W LL ACK H D+A A+++ + P +A YVLLS+I+AS +W V+ +R+ MR NV K PG SW+E+ +VH FT G K+HP I + LE+ ++ GY PD +HD+D EEK +L HSE+LA+A+ L+ P GVPIRVMKNLRVC DCH AIK IS + REII+RDA+RFHHF NG+CSC DYW Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.678e-69 Identity = 120/249 (48.19%), Postives = 172/249 (69.08%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F MV L+PR+EHY C+VDLLGR G LDEAE I NMP+K D +IWK LL AC++ + +M R+A ++ + P D+ YV LSN++AS W VSE+R M+E++++K+PG S ++I +H+F + D SHP + EI+ L E++ +++L GY P T + +++ E+KE L +HSEK+A AF L++T G PIR++KNLR+C DCH +IK IS + R+I VRD RFHHF++G CSC DYW Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.156e-68 Identity = 116/249 (46.59%), Postives = 176/249 (70.68%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M ++Y +KP++EHY C+V LLGR G L A I+NM + AD+++W ++L +CK+H + IAE ++ LN +++ YVLLSNI+AS ++GV+++R M+E+ + KEPG+S +EI+N+VH+F GD+ H S EI L +++ +K GYVP+T + D++ EKE +L+ HSE+LAIA+ L++T G P+++ KNLRVCSDCH K IS I R+I++RD +RFHHF +G CSCGD+W Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.156e-68 Identity = 115/242 (47.52%), Postives = 175/242 (72.31%), Query Frame = -2 Query: 123 YRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 848 Y +KP +EHY+C+ D LGR G + +AE LI +M ++A +++TLL+AC++ T+ R+A ++L+L P D++ YVLLSN++A+A +W + R M+ VKK+PG SW+E+KN++H F + D+S+ + I ++++ ++K GYVP+T + D++ EEKE L +HSEKLA+AF L++TP PIRV+KNLRVC DCH A+KYI+ + NREI++RDA+RFH F++G CSCGDYW Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 6.273e-68 Identity = 120/252 (47.62%), Postives = 173/252 (68.65%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNE---EKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M + ++++P EHY+C++DLLGR G L+EAE I MP K ++ W LL AC+ HK+ +A R A E++ + P A PYV+L+N++A A++W+ ++ +R++MR + ++K+PG SW+E+K + H F D SHP E++ YLEE+ +MK GYV D M D ++E L HHSEKLA+AF LM+T G + V+KNLR+C DCH AIK++SA+ REIIVRD RFH F++GKCSCGDYW Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721 The following BLAST results are available for this feature:
BLAST of CV885255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885255 ID=CV885255; Name=CV885255; organism=Citrus sinensis; type=EST; length=870bpback to top |