CV885255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 6.273e-68 Identity = 124/249 (49.80%), Postives = 170/249 (68.27%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M ++ ++P LEHY C+VDLLGR G L +A LI+ M +K D+IIW +LL+AC+IHK+ ++A + +L+ + Y+LLS+I+A A RW+ V +R M+ R + K PG S LE+ +VH F +GD+ HP +I +L EL ++ GYV +T + HD+D EEKE L+ HSEKLAIAF +MNT G + V+KNLRVCSDCH IK IS I +RE +VRDA RFHHF++G CSCGDYW Sbjct: 411 FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.070e-67 Identity = 121/249 (48.59%), Postives = 168/249 (67.47%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F M + Y++ P+LEHY C++DLLG G EAE +I M ++ D +IW +LL ACK+H + ++ AE ++K+ P + YVLLSNI+ASA RW V++ R + ++ +KK PG S +EI + VH+F +GDK HP + EI LEE+ ++ G+VPDT + +M+ E KE L+HHSEKLAIAF L++T G + ++KNLRVC +CH A K IS I REII RD +RFHHFR+G CSC DYW Sbjct: 493 FRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.397e-67 Identity = 125/254 (49.21%), Postives = 170/254 (66.93%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNT-----PTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F LM Y++ PRLEH C+VDLLGR G + EA I++M ++ + +W LL AC++H TD+ A+++ +L P + YVLLSNI+A A RW+ V+ +R M+ + +KK PG S +E+ +H F +GD+SHP S EI L+ L +MK GYVPD+ + +HD++ E+KE +L HSEKLAI FALMNT + IR+ KNLR+C DCHVA K IS I +REII+RD +RFH FR G CSCGDYW Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP308_ARATH (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3) HSP 1 Score: 255.758 bits (652), Expect = 2.384e-67 Identity = 127/251 (50.60%), Postives = 166/251 (66.14%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLK-LNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLR-GYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F M K Y ++P L+HYTC++DLLGR G LDEAE LI MP D W LLSACK M RIA+ ++ +D + Y+LLSNI+ASA W VSE R + E V+K+PG S +E++ + F G+ SHP +I L++L EM++R GYVPDT +HDMD +EKE L HSE+ A+A+ L+ G PIR++KNLRVC DCHV +K+IS I REIIVRDA+R+HHF+ GKCSC D+W Sbjct: 362 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 2.384e-67 Identity = 124/250 (49.60%), Postives = 169/250 (67.60%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTI-IWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F +M Y ++P +HY CVVDLLGR G + EA L+ MP + W +LL A +IH + ++ A+ +++L P A+ YVLL+NI++SA W +E+R M+E+ V+KEPG SW+E ++VH+F GD SHP S ++ YLE L M+ GYVPDT +H+++ +EKE L HSEKLAIAF ++NT G IRV KNLRVC+DCH+A K+IS I +REII+RD RFH F+NG CSCGDYW Sbjct: 641 FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP419_ARATH (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.113e-67 Identity = 121/237 (51.05%), Postives = 163/237 (68.78%), Query Frame = -2 Query: 123 RLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 833 +++HYTC+VD+LGRCG L EAE LI M VK + ++W LLSAC++H D + A + L+ + +A YVLLSNI+ASA RW VS+LR M++ + K+PG SW+ I+ + H+F GD+ H S I LE L ++K GY PD + +HD+++E+KE L +HSE+LAIAF L+NT G + VMKNLRVC DCH IK IS + REI++RD RFHHF+NG CSCGDYW Sbjct: 463 KIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS--RIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP377_ARATH (Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.310e-67 Identity = 121/250 (48.40%), Postives = 173/250 (69.20%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTG-VPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M++ + ++P LEHYTC+V LLGR G LD+A LI +P + +IW+ +LSA + + A R AEE+LK+NP+D A YVL+SN++A AK+W V+ +R++M+E VKKEPG+SW+E + VH F++G HP I+ LE L + GYVPD A + DMD+EEK+ L HSE+LA+A+ L+ P+ I +MKNLR+CSDCH A+K IS+I R++++RD +RFHHF G CSCGD+W Sbjct: 573 FESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 2.636e-66 Identity = 119/252 (47.22%), Postives = 172/252 (68.25%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSAC--KIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFAL-MNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M Y L PR+EH++C+ D+LGR G LD+ E I MP+K + +IW+T+L AC + ++ + AE + +L P +A YVLL N++A+ RW+ + + R+ M++ +VKKE G SW+ +K+ VH F GDKSHP + I L+EL +M+ GYVP TG ++D++ E KE L +HSEKLA+AF L + +PIR+MKNLRVC DCH A KYIS I+ R+II+RD++RFHHF++G CSC D+W Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.442e-66 Identity = 124/250 (49.60%), Postives = 169/250 (67.60%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGD-KSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 ++ M K + ++PRLEHY C+VD+LGR G L EAE I M VK + I LL ACKI+K+T++A R+ ++K+ P + YVLLSNI+A A +W + LR+ M+E+ VKK PG S +EI ++++FTMGD + HP +I EE+ +++L GY +TG D+D EEKE ++ HSEKLAIA+ +M T G IR++KNLRVC DCH K IS + RE+IVRD +RFHHFRNG CSC DYW Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 5.871e-66 Identity = 109/242 (45.04%), Postives = 169/242 (69.83%), Query Frame = -2 Query: 123 YRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 848 +++ P+ +HY CV+DLLGR G LD+A +I+ MPV+ +W LLSACK H+ ++ A+++ ++P + YV LSN++A+A+ W V+E+R M+E+ + K+ G SW+E++ ++ F +GDKSHP EI+ +E + S +K G+V + A +HD+++EE E L HSE++AIA+ L++TP G P+R+ KNLR C +CH A K IS + +REI+VRD +RFHHF++G CSCGDYW Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694 The following BLAST results are available for this feature:
BLAST of CV885255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885255 ID=CV885255; Name=CV885255; organism=Citrus sinensis; type=EST; length=870bpback to top |