CV885255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 2.093e-55 Identity = 105/239 (43.93%), Postives = 153/239 (64.02%), Query Frame = -2 Query: 123 LEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALM---NTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 830 ++HY CVVDLL R G L EA +I +M + D ++W++LL A +I+ +MA + E+ ++ + +VLLSN++A+ RW+ V +R+ M + VKK PG+S++E K +H+F DKSH EI ++E+ +++ GYV TG +HD+ EEKE L +HSEKLA+A+ LM P+RV+ NLR+C DCHV K+IS I REIIVRD RFH F++G CSC D+W Sbjct: 343 MKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP363_ARATH (Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.090e-55 Identity = 104/243 (42.80%), Postives = 151/243 (62.14%), Query Frame = -2 Query: 123 YRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPT-GVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 848 Y ++P EHYT V +LG G L+EAE I +MPV+ + + + LL +C+IH +T +A R+A+ +L P + Y+L SNI++++ W +RE MRER +K P SW+ +N++H F D SHP +I LE L E GY P+T + ++D K+ L HHS KLA+ + ++++ T G P+RVMKN+ +C DCH KYIS + REI++RD+S FHHF NGKCSC D W Sbjct: 654 YDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.314e-54 Identity = 100/250 (40.00%), Postives = 157/250 (62.80%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMK-LRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F M + Y ++P +EHY C+VDL GR G L +A I MP+ I+W+TLL AC H + ++A ++ + + +L+P ++ VLLSN +A+A +W+ V+ +R++M + +KK S +E+ +++FT G+K +E L+E+ +K GY P+ + ++D++ EEKE + HSEKLA+AFAL G IR++KNLR+C DCH +K S + EI+VRD +RFH F++G CSC DYW Sbjct: 394 FSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.155e-54 Identity = 101/243 (41.56%), Postives = 146/243 (60.08%), Query Frame = -2 Query: 129 VKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGD 857 ++ Y + P L+HY CVVDLLGR G L EA I+ MPV D +W LL+AC+IH D+ A+ + +L+ + Y+LL N++A +W+ V+++R M+E + + G SW+E+K +VH F DK HP + EI+ LE +M G + + D ++ HSE+ AIAF L+NT G+PI V KNL +C +CH +K+IS REI VRDA FHHF++G+CSCGD Sbjct: 624 MEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.270e-52 Identity = 102/250 (40.80%), Postives = 153/250 (61.20%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVP-DTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F++M ++ L P ++HY C+VDL GR G L+ + +I D ++W+TLL +CKIH++ ++ +++++L +A YVL+++I+++A Q + +R+ +R +++ PG SW+EI +QVH+F + DK HP S I L E+ + L GY P D+ + + HSEKLAIA+ LM T G +R+ KNLRVC DCH KY+S NREIIVRD RFHHF +G CSC DYW Sbjct: 332 FEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP427_ARATH (Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.968e-51 Identity = 93/250 (37.20%), Postives = 157/250 (62.80%), Query Frame = -2 Query: 123 MVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDK--SHPSSMEIDLY--LEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 860 M + + +KPR HY C+++LLGR G LDEA A IR P+K +W LL+AC++ ++ ++ +AE++ + P YV++ N++ S + + + E + + + P +W+E+ +Q H F GD+ S+ +++ +Y ++EL E+ GY + + D+D +E+E ++HSEKLAIA+ L+NTP P+++ +N R+C +CH +++IS + RE++VRDASRFHHF+ GKCSCG YW Sbjct: 452 MSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP313_ARATH (Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.648e-50 Identity = 102/255 (40.00%), Postives = 152/255 (59.61%), Query Frame = -2 Query: 123 LMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKAD--TIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGY------VPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 863 LM +KY + P HYTCVVD+LGR G +DEA L + + V A+ ++W LLSA ++H ++ ++ +++ N + + Y+ LSN +A + W+ LR M+ KE SW+E K+ V+ F GD S S EI+ +L++L MK RG+ + + + D+D E K+ + H E+LA+A+ L++ P G IR+M NLR+C DCH A K IS I REI+VRD +RFH F+NG C+C DYW Sbjct: 362 LMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP114_ARATH (Pentatricopeptide repeat-containing protein At1g71420 OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.314e-49 Identity = 102/257 (39.69%), Postives = 158/257 (61.48%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLK--LNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEY-NLKHHSEKLAIAFALM----NTPTGVP-IRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F M +K P+L HY CV+D+L R EAE +I+ MP+ D ++W LL +C+ H +T + G++A + LK + P ++ Y+ +SNI+ + + + + M V+KEP +SW EI N+VH+F G + P + L+ L S +K GYVP+ + D+++EE+E NL HHSEKLA+AFA+M ++ GV I++MKN R+C DCH +K S + +EI++RD++RFHHF++ CSC DYW Sbjct: 490 FRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRL-GKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.902e-40 Identity = 85/250 (34.00%), Postives = 139/250 (55.60%), Query Frame = -2 Query: 123 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRG-YVPDTGADMHDMDNEEKEYNLKHHSEKLAIAFALMNTPTGVPIRVMKNLRVCSDCHVAIKYISAIKNREIIVRDASRFHHFRNGKCSCGDYW 869 F+ M ++Y + P +EHY C++DL+GR G A+ + MP IW +LL+A + HK +A AE++ K+ + YVLL N++A A RW+ V+ ++ M + + + S +E K + H FT GD+SH ++ +I L+ ++ + YV + + + + + HS +LA F L++T TG + V N R+C CH ++ S + REI+V D+ FHHF NG+CSCG+YW Sbjct: 555 FESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
BLAST of CV885255 vs. ExPASy Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.325e-38 Identity = 74/184 (40.22%), Postives = 113/184 (61.41%), Query Frame = -2 Query: 318 FDLMVKKYRLKPRLEHYTCVVDLLGRCGCLDEAEALIRNMPVKADTIIWKTLLSACKIHKSTDMAGRIAEEVLKLNPRDAAPYVLLSNIHASAKRWQGVSELREAMRERNVKKEPGVSWLEIKNQVHQFTMGDKSHPSSMEIDLYLEELTSEMKLRGYVPDTGADMHDMDNEEKEYNLKHHSEK 869 F M + Y ++P+ EHY CVVDL GR G L EA +++MP D +W TLL AC++HK+ ++A + +++ L+P ++ YVL+SN HA+A+ W+ V+++R M+ER V+K PG SW+EI + H F GD +HP S I L L E++L GY+P +H ++ K Y + EK Sbjct: 667 FRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLHP-ESSRKVYPVSRFIEK 849 The following BLAST results are available for this feature:
BLAST of CV885255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885255 ID=CV885255; Name=CV885255; organism=Citrus sinensis; type=EST; length=870bpback to top |