CV885249

Overview
NameCV885249
Unique NameCV885249
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHEIVG+V EVG  V +F  GD VGVG    SCR C  CNDG E +C + + T  A + D T+T GGYS ++V  E +  +I
Sbjct:   66 PGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRI 148          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16
Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARS-VYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHEI G+V  VG  V++  VGD VGVG +V+SC +C+YC +  E  C +  V T+N++D DG  T GGYS  IVV +R+  +I
Sbjct:   64 PGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRI 147          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHE+VG V EVG  V++++VGD VG G  V  CR C  CN   E +C + ++ +N +  DG  T+GG++  IVV ER+  KI
Sbjct:   67 PGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKI 149          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHE+VG V EVG  V++++VGD VG G  V  CR C  CN   E +C + ++ +N +  DG  T+GG++  IVV ER+  KI
Sbjct:   67 PGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKI 149          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHE+VG V EVG  V++++VGD VG G  V  CR C  CN   E +C + ++ +N +  DG  T+GG++  IVV ER+  KI
Sbjct:   67 PGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKI 149          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHE+VG V EVG +V++FKVGD VG GT V  C+ C+ C   +E +C + ++++N +  DG  T+GG+S ++VV +++  KI
Sbjct:   67 PGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKI 149          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHEIVG+V  VG  V++FK GD VGVG +V+SCR C  C  G E +C   V T N  D  G  T+GG+S  +VV + Y  ++
Sbjct:   65 PGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRV 147          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHEIVG+V  VG  V+RFK GD VGVG +V+SCR C  C  G E +C   V T N  D  G  T+GG+S  +VV + Y  ++
Sbjct:   65 PGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRV 147          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16
Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 842
            PGHE+VG V EVG  VS++ VGD VGVG  V  CRDC+ C   +E +C + ++++N +  DG  T+GG++  +VV +++  KI
Sbjct:   68 PGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKI 150          
BLAST of CV885249 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 3
Query:  594 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCKYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY 830
            PGHEIVG V EVG  V +FKVGD VGVG  V SC  C+ C+D  E +CA+ V T+   + DG+IT GGY+  +V  + +
Sbjct:   47 PGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHF 125          
The following BLAST results are available for this feature:
BLAST of CV885249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CADH7_ARATH8.249e-1749.40Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
ADHA_BACSU1.077e-1648.81Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
CADH_EUCGL1.838e-1645.78Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU1.838e-1645.78Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH1_EUCGU1.838e-1645.78Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH1_ARACO1.838e-1644.58Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CAD8D_ORYSJ1.838e-1648.19Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CAD8A_ORYSJ1.838e-1649.40Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH_LOLPR2.400e-1644.58Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
MTDH_PETCR3.135e-1650.63Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013E10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885249 ID=CV885249; Name=CV885249; organism=Citrus sinensis; type=EST; length=848bp
ATTTATAATTTAAAGAATTTCTAAAACGACTCTCTTGAGCTTTATTATTA
ATAAAGCCACTTATTTACAAAAGGATTAACATTGGAAGGAGCAAAAAAGT
ATACACTTTTCATCCGTTTCCATATGATAGAAACAAGAACAAGTAAAGGA
AAAATTATTAATTCAGCAAGGTAATATAGAGGAAATAAATTAAGATTATT
AGAGTTGATGGATATAAATAAATTAATTAAAAGAAACTGCTAGTTCTTGG
TGTTCATGCTTTTTGTAACTTGCTCAGCATTTTGTTTGACGGCTTCCTTA
GATTTATCAGCCTTTCCGAGCAAATTATCTTTGACAGTTTGAGCAGTGTC
TTTGGCCGAACCCCATGCATCTTGAACTGTTTGTTTTGCCTTATCACCAA
TGTCTTGTGCTGTTTCAGACACCTTTCCAGCCTTATCTTTTGTAATATGA
CTCATCTGAATGTATCTAGGTTTTGAGGCAAGAAATTGCTTAGAATTCCA
AATGCTTCTCCTAGCAATTGCAAGTTTTGAAAGAGTGGAACTTGCCATTA
TTATTTTTCTTTTGTTTTCTTTTTATTATCTTCTACTTTGGTGCCTGGAC
ATGAGATTGTTGGAATTGTGAAAGAGGTTGGTCACAATGTTAGCCGCTTC
AAAGTTGGTGACCATGTTGGCGTGGGAACTTATGTCAACTCATGCAGAGA
TTGTAAGTATTGTAATGATGGGCTAGAAGTTCATTGTGCTCGGTCAGTTT
ACACTTTTAATGCCATTGATGCGGATGGTACTATCACAAAAGGAGGGTAT
TCTAGTTACATTGTTGTCCATGAGAGATACTGTTATAAAATAGCCAAT
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