CV885225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.949e-35 Identity = 83/224 (37.05%), Postives = 128/224 (57.14%), Query Frame = -1 Query: 44 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGH 715 K +L++I+G + G + A+LG +G GKS+L+D LA R L G + +NG L K S YV+QDD++ LTV E L F+A RLP T++ +K R+ +I +LGL A + +G +++I DP +LFLDEPT+GLDS++A V+ +L+R+++ G +I SIHQP Y I L D + L+ G+ ++ G +FE G+ Sbjct: 61 KEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLING-ALRPTNFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGY 282
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB28G_ARATH (ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.949e-35 Identity = 82/237 (34.60%), Postives = 133/237 (56.12%), Query Frame = -1 Query: 23 LFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTV-YSGSPMNLPHFFEEFGHPIPENEN 730 L K K L+ ++G+ G + AV+G SG+GK+T + AL + + G I +NG+V + K I +V QDD++ LTVEE L F+A RLP L K +K + V+ +I+ LGL++ +++G ++++ +P LL LDEPTSGLDS+S+ ++++ L+R A G + M +HQPSY + + D +I L++G + Y G + +F G +PE N Sbjct: 508 LKGKNKHLMRCVTGKLSPGRVSAVMGPSGAGKTTFLTALTGKAPGCIMTGMILVNGKVESIQSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLPADLPKPEKVLVVERVIESLGLQHVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVVHQPSYTLFRMFDDLILLAKGGLICYQGPVKKVEEYFSSLGIVVPERVN 744
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.546e-35 Identity = 78/229 (34.06%), Postives = 133/229 (58.08%), Query Frame = -1 Query: 23 LNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLK-GTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 706 + ++S + R G+++A++G+SG G+++L+D + R +K G I +NG+ ++++ A+V Q D L LTV ETL F A+ RLPRT S++++ RV+ +I +L LR A T +G+ + ++ +P +L LDEPTSGLDS +A+ +V L R+A+ +V++S+HQP I L D ++ ++ G +Y G+ + +F GHP P N Sbjct: 89 IRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQQMVQYFTSIGHPCPRYSN 317
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 2.546e-35 Identity = 83/231 (35.93%), Postives = 131/231 (56.71%), Query Frame = -1 Query: 23 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 715 KTLL ISG+ GE++A++G SG+GKSTL++ LA + +KG + +NG + R + +S Y+MQDD+L LTV+E +M +A +L ++ V+ ++ LGL + A T G +++++P ++F DEPTSGLDS S + VV +++ +AQ G +I +IHQPS ++ L D++ LS+GQ VY G NL + + G P N Sbjct: 98 KTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAG-YRETGMKGAVLINGLPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE--KDEGRREMVKEILTALGLLSCANTRTGSLSGGQRKRLAIAL-----ELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGKVCNLVPYLRDLGLNCPTYHN 320
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.325e-35 Identity = 88/233 (37.77%), Postives = 133/233 (57.08%), Query Frame = -1 Query: 29 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAK--ESLKGTIK-LNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG-DXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPEN 715 K LL + SG A GE++AV+G+SG+GK+TL++A A R +K + TI+ LNG ++++ ++ AYV QDDL LT E L+F A R+PR +++ +K RV +I L L T+IG + + DP LL DEPTSGLDS A+ VV+VL++++Q G VI++IHQPS + L D+++ ++ G+ + G+P FF G P N Sbjct: 101 KHLLKNDSGVAYPGELLAVMGSSGAGKTTLLNASAFRSSKGVQISPSTIRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHMTQKQKVQRVDQVIQDLSLGKCQNTLIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPGEAVDFFSYIGATCPTN 333
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35 Identity = 98/260 (37.69%), Postives = 142/260 (54.62%), Query Frame = -1 Query: 23 SKTKT-LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGE---VLESR---------------------MLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIA-QSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 724 SKT T L+N S + G +MAV+G SGSGK+TL++ LA++I+ G + NG VLE VI AY+ Q D+L LT ETL FAA+ +L S+ KK+ V+ LI++LGL++ A T++GD +I +P ++FLDEPT+GLD+ SA++V+K L+++A + G IMSIHQP IL LLD++ LS+G VY N +FE G+ +P+ N Sbjct: 38 SKTNTTLVNTFSMDLPSGSVMAVMGGSGSGKTTLLNVLASKIS-----GGLTHNGSIRYVLEDTGSEPNETEPKRAHLDGQDHPIQKHVIMAYLPQQDVLSPRLTCRETLKFAADLKL--NSSERTKKLMVEQLIEELGLKDCADTLVGDNSHRGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKEDGRTFIMSIHQPRSDILFLLDQVCILSKGNVVYCDKMDNTIPYFESIGYHVPQLVN 290 HSP 2 Score: 131.724 bits (330), Expect = 4.207e-30 Identity = 79/245 (32.24%), Postives = 137/245 (55.92%), Query Frame = -1 Query: 23 NLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRI-----AKESLKGTIKLNGEVLESRMLKVISAYVMQDD-LLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIA-QSGSIVIMSIHQPSYRILGLLDRMIFLSR-GQTVYSGSPMNLPHFFEEFGHPIPENEN 733 N +TK +L ++ + G I A++G SGSGKS+L++ ++ R+ AK G+I N + M K + +YV QDD L + LTV+ETL +AA RL L+++++ R LI LGL++ +IG+ + +++DP +L LDEPTSGLDS ++ ++++L+++ + G +I++IHQP + ++ L++ G+T ++GSP + +F E G+ P N Sbjct: 701 NFHHETKEILQSVNAIFKPGMINAIMGPSGSGKSSLLNLISGRLKSSVFAKFDTSGSIMFNDIQVSELMFKNVCSYVSQDDDHLLAALTVKETLKYAAALRLHH-LTEAERMERTDNLIRSLGLKHCENNIIGNEFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKLCREQGKTIIITIHQPRSELFKRFGNVLLLAKSGRTAFNGSPDEMIAYFTELGYNCPSFTN 944
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35 Identity = 85/235 (36.17%), Postives = 139/235 (59.15%), Query Frame = -1 Query: 23 KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRI-AKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXI-DIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 721 + K ++N+ +G + G +MA++G+SGSGK+TL+ LA R A ++G I +NG + M + IS YV QDDL LTV E L F A RL R +SK ++++ ++ L+++ GL +AA+T IG +++++P++LF DEPT+GLDS SA +V L +AQ G+ ++ +IHQPS ++ + ++ L+ G+ ++GSP + FF G+ PE N Sbjct: 86 RMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHR-ISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYN 319
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG5_HUMAN (ATP-binding cassette sub-family G member 5 OS=Homo sapiens GN=ABCG5 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35 Identity = 79/233 (33.91%), Postives = 132/233 (56.65%), Query Frame = -1 Query: 23 TKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKE-SLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 718 T+ +L D+S G+IM +LG+SGSGK+TL+DA++ R+ + + G + +NG L + +YV+Q D L S LTV ETL + A + R S +K +V+A++ +L L + A +IG+ ++ DP ++ DEPT+GLD +A +V +L +A+ IV+++IHQP + L D++ LS G+ ++ G+P + FF + G+P PE+ N Sbjct: 65 TRQILKDVSLYVESGQIMCILGSSGSGKTTLLDAMSGRLGRAGTFLGEVYVNGRALRREQFQDCFSYVLQSDTLLSSLTVRETLHYTALLAIRRGNPGSFQK-KVEAVMAELSLSHVADRLIGNYSLGGISTGERRRVSIAAQLLQDPKVMLFDEPTTGLDCMTANQIVVLLVELARRNRIVVLTIHQPRSELFQLFDKIAILSFGELIFCGTPAEMLDFFNDCGYPCPEHSN 296
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35 Identity = 82/231 (35.50%), Postives = 130/231 (56.28%), Query Frame = -1 Query: 23 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 715 KTLL ISG+ GE++A++G SG+GKSTL++ LA + +KG + +NG + R + +S Y+MQDD+L LTV+E +M +A +L ++ V+ ++ LGL A T G +++++P ++F DEPTSGLDS S + VV +++ +AQ G ++ +IHQPS ++ L D++ LS+GQ VY G NL + + G P N Sbjct: 98 KTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAG-YRETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE--KDEGRREMVKEILTALGLLPCANTRTGSLSGGQRKRLAIAL-----ELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQGQCVYRGKVSNLVPYLRDLGLNCPTYHN 320
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 9.675e-35 Identity = 76/229 (33.19%), Postives = 134/229 (58.52%), Query Frame = -1 Query: 23 LNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLK-GTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 706 + ++S + R G+++A++G++G G++TL+D + R +K G I +NG+ ++++ A+V Q D L LTV ETL F A+ RLP+T S++++ RV+ +I +L LR A T +G+ + ++ +P +L LDEPTSGLDS +A+ +V+ L R+A+ +V++S+HQP I L D ++ ++ G +Y G ++ +F G+P P N Sbjct: 110 IRNLSFKVRSGQMLAIIGSAGCGRATLLDVITGRDHGGKMKSGQIWINGQPSTPQLIQKCVAHVRQQDQLLPNLTVRETLTFIAQMRLPKTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGVAQHMVQYFTSIGYPCPRYSN 338 The following BLAST results are available for this feature:
BLAST of CV885225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885225 ID=CV885225; Name=CV885225; organism=Citrus sinensis; type=EST; length=760bpback to top |