CV885225

Overview
NameCV885225
Unique NameCV885225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.949e-35
Identity = 83/224 (37.05%), Postives = 128/224 (57.14%), Query Frame = -1
Query:   44 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGH 715
            K +L++I+G  + G + A+LG +G GKS+L+D LA R     L G + +NG  L     K  S YV+QDD++   LTV E L F+A  RLP T++  +K  R+  +I +LGL   A + +G                  +++I DP +LFLDEPT+GLDS++A  V+ +L+R+++ G  +I SIHQP Y I  L D +  L+ G+ ++ G       +FE  G+
Sbjct:   61 KEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLING-ALRPTNFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGY 282          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: AB28G_ARATH (ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.949e-35
Identity = 82/237 (34.60%), Postives = 133/237 (56.12%), Query Frame = -1
Query:   23 LFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTV-YSGSPMNLPHFFEEFGHPIPENEN 730
            L  K K L+  ++G+   G + AV+G SG+GK+T + AL  +     + G I +NG+V   +  K I  +V QDD++   LTVEE L F+A  RLP  L K +K + V+ +I+ LGL++   +++G                  ++++ +P LL LDEPTSGLDS+S+ ++++ L+R A  G  + M +HQPSY +  + D +I L++G  + Y G    +  +F   G  +PE  N
Sbjct:  508 LKGKNKHLMRCVTGKLSPGRVSAVMGPSGAGKTTFLTALTGKAPGCIMTGMILVNGKVESIQSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLPADLPKPEKVLVVERVIESLGLQHVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVVHQPSYTLFRMFDDLILLAKGGLICYQGPVKKVEEYFSSLGIVVPERVN 744          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.546e-35
Identity = 78/229 (34.06%), Postives = 133/229 (58.08%), Query Frame = -1
Query:   23 LNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLK-GTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 706
            + ++S + R G+++A++G+SG G+++L+D +  R     +K G I +NG+    ++++   A+V Q D L   LTV ETL F A+ RLPRT S++++  RV+ +I +L LR  A T +G+                 + ++ +P +L LDEPTSGLDS +A+ +V  L R+A+   +V++S+HQP   I  L D ++ ++ G  +Y G+   +  +F   GHP P   N
Sbjct:   89 IRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQQMVQYFTSIGHPCPRYSN 317          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 2.546e-35
Identity = 83/231 (35.93%), Postives = 131/231 (56.71%), Query Frame = -1
Query:   23 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 715
            KTLL  ISG+   GE++A++G SG+GKSTL++ LA    +  +KG + +NG   + R  + +S Y+MQDD+L   LTV+E +M +A  +L        ++  V+ ++  LGL + A T  G                   +++++P ++F DEPTSGLDS S + VV +++ +AQ G  +I +IHQPS ++  L D++  LS+GQ VY G   NL  +  + G   P   N
Sbjct:   98 KTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAG-YRETGMKGAVLINGLPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE--KDEGRREMVKEILTALGLLSCANTRTGSLSGGQRKRLAIAL-----ELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGKVCNLVPYLRDLGLNCPTYHN 320          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.325e-35
Identity = 88/233 (37.77%), Postives = 133/233 (57.08%), Query Frame = -1
Query:   29 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAK--ESLKGTIK-LNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIG-DXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPEN 715
            K LL + SG A  GE++AV+G+SG+GK+TL++A A R +K  +    TI+ LNG  ++++ ++   AYV QDDL    LT  E L+F A  R+PR +++ +K  RV  +I  L L     T+IG                    + + DP LL  DEPTSGLDS  A+ VV+VL++++Q G  VI++IHQPS  +  L D+++ ++ G+  + G+P     FF   G   P N
Sbjct:  101 KHLLKNDSGVAYPGELLAVMGSSGAGKTTLLNASAFRSSKGVQISPSTIRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHMTQKQKVQRVDQVIQDLSLGKCQNTLIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPGEAVDFFSYIGATCPTN 333          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35
Identity = 98/260 (37.69%), Postives = 142/260 (54.62%), Query Frame = -1
Query:   23 SKTKT-LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGE---VLESR---------------------MLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIA-QSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 724
            SKT T L+N  S +   G +MAV+G SGSGK+TL++ LA++I+     G +  NG    VLE                          VI AY+ Q D+L   LT  ETL FAA+ +L    S+  KK+ V+ LI++LGL++ A T++GD                   +I +P ++FLDEPT+GLD+ SA++V+K L+++A + G   IMSIHQP   IL LLD++  LS+G  VY     N   +FE  G+ +P+  N
Sbjct:   38 SKTNTTLVNTFSMDLPSGSVMAVMGGSGSGKTTLLNVLASKIS-----GGLTHNGSIRYVLEDTGSEPNETEPKRAHLDGQDHPIQKHVIMAYLPQQDVLSPRLTCRETLKFAADLKL--NSSERTKKLMVEQLIEELGLKDCADTLVGDNSHRGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKEDGRTFIMSIHQPRSDILFLLDQVCILSKGNVVYCDKMDNTIPYFESIGYHVPQLVN 290          

HSP 2 Score: 131.724 bits (330), Expect = 4.207e-30
Identity = 79/245 (32.24%), Postives = 137/245 (55.92%), Query Frame = -1
Query:   23 NLFSKTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRI-----AKESLKGTIKLNGEVLESRMLKVISAYVMQDD-LLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIA-QSGSIVIMSIHQPSYRILGLLDRMIFLSR-GQTVYSGSPMNLPHFFEEFGHPIPENEN 733
            N   +TK +L  ++   + G I A++G SGSGKS+L++ ++ R+     AK    G+I  N   +   M K + +YV QDD  L + LTV+ETL +AA  RL   L+++++  R   LI  LGL++    +IG+                 + +++DP +L LDEPTSGLDS ++  ++++L+++  + G  +I++IHQP   +      ++ L++ G+T ++GSP  +  +F E G+  P   N
Sbjct:  701 NFHHETKEILQSVNAIFKPGMINAIMGPSGSGKSSLLNLISGRLKSSVFAKFDTSGSIMFNDIQVSELMFKNVCSYVSQDDDHLLAALTVKETLKYAAALRLHH-LTEAERMERTDNLIRSLGLKHCENNIIGNEFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKLCREQGKTIIITIHQPRSELFKRFGNVLLLAKSGRTAFNGSPDEMIAYFTELGYNCPSFTN 944          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35
Identity = 85/235 (36.17%), Postives = 139/235 (59.15%), Query Frame = -1
Query:   23 KTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRI-AKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXI-DIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 721
            + K ++N+ +G  + G +MA++G+SGSGK+TL+  LA R  A   ++G I +NG  +   M + IS YV QDDL    LTV E L F A  RL R +SK ++++ ++ L+++ GL +AA+T IG                    +++++P++LF DEPT+GLDS SA  +V  L  +AQ G+ ++ +IHQPS ++    + ++ L+ G+  ++GSP +   FF   G+  PE  N
Sbjct:   86 RMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHR-ISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYN 319          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG5_HUMAN (ATP-binding cassette sub-family G member 5 OS=Homo sapiens GN=ABCG5 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35
Identity = 79/233 (33.91%), Postives = 132/233 (56.65%), Query Frame = -1
Query:   23 TKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKE-SLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 718
            T+ +L D+S     G+IM +LG+SGSGK+TL+DA++ R+ +  +  G + +NG  L     +   +YV+Q D L S LTV ETL + A   + R    S +K +V+A++ +L L + A  +IG+                   ++ DP ++  DEPT+GLD  +A  +V +L  +A+   IV+++IHQP   +  L D++  LS G+ ++ G+P  +  FF + G+P PE+ N
Sbjct:   65 TRQILKDVSLYVESGQIMCILGSSGSGKTTLLDAMSGRLGRAGTFLGEVYVNGRALRREQFQDCFSYVLQSDTLLSSLTVRETLHYTALLAIRRGNPGSFQK-KVEAVMAELSLSHVADRLIGNYSLGGISTGERRRVSIAAQLLQDPKVMLFDEPTTGLDCMTANQIVVLLVELARRNRIVVLTIHQPRSELFQLFDKIAILSFGELIFCGTPAEMLDFFNDCGYPCPEHSN 296          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35
Identity = 82/231 (35.50%), Postives = 130/231 (56.28%), Query Frame = -1
Query:   23 KTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLKGTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 715
            KTLL  ISG+   GE++A++G SG+GKSTL++ LA    +  +KG + +NG   + R  + +S Y+MQDD+L   LTV+E +M +A  +L        ++  V+ ++  LGL   A T  G                   +++++P ++F DEPTSGLDS S + VV +++ +AQ G  ++ +IHQPS ++  L D++  LS+GQ VY G   NL  +  + G   P   N
Sbjct:   98 KTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAG-YRETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE--KDEGRREMVKEILTALGLLPCANTRTGSLSGGQRKRLAIAL-----ELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQGQCVYRGKVSNLVPYLRDLGLNCPTYHN 320          
BLAST of CV885225 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 9.675e-35
Identity = 76/229 (33.19%), Postives = 134/229 (58.52%), Query Frame = -1
Query:   23 LNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKESLK-GTIKLNGEVLESRMLKVISAYVMQDDLLFSMLTVEETLMFAAEFRLPRTLSKSKKKIRVQALIDQLGLRNAAKTVIGDXXXXXXXXXXXXXXXXXIDIIHDPILLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPMNLPHFFEEFGHPIPENEN 706
            + ++S + R G+++A++G++G G++TL+D +  R     +K G I +NG+    ++++   A+V Q D L   LTV ETL F A+ RLP+T S++++  RV+ +I +L LR  A T +G+                 + ++ +P +L LDEPTSGLDS +A+ +V+ L R+A+   +V++S+HQP   I  L D ++ ++ G  +Y G   ++  +F   G+P P   N
Sbjct:  110 IRNLSFKVRSGQMLAIIGSAGCGRATLLDVITGRDHGGKMKSGQIWINGQPSTPQLIQKCVAHVRQQDQLLPNLTVRETLTFIAQMRLPKTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGVAQHMVQYFTSIGYPCPRYSN 338          
The following BLAST results are available for this feature:
BLAST of CV885225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
ABCG2_MACMU1.949e-3537.05ATP-binding cassette sub-family G member 2 OS=Maca... [more]
AB28G_ARATH1.949e-3534.60ABC transporter G family member 28 OS=Arabidopsis ... [more]
ABCG8_MOUSE2.546e-3534.06ATP-binding cassette sub-family G member 8 OS=Mus ... [more]
ABCG1_HUMAN2.546e-3535.93ATP-binding cassette sub-family G member 1 OS=Homo... [more]
WHITE_CERCA3.325e-3537.77Protein white OS=Ceratitis capitata GN=W PE=2 SV=1[more]
YO075_YEAST5.672e-3537.69Uncharacterized ABC transporter ATP-binding protei... [more]
SCRT_DROME5.672e-3536.17Protein scarlet OS=Drosophila melanogaster GN=st P... [more]
ABCG5_HUMAN5.672e-3533.91ATP-binding cassette sub-family G member 5 OS=Homo... [more]
ABCG1_MOUSE5.672e-3535.50ATP-binding cassette sub-family G member 1 OS=Mus ... [more]
ABCG8_RAT9.675e-3533.19ATP-binding cassette sub-family G member 8 OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013D08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885225 ID=CV885225; Name=CV885225; organism=Citrus sinensis; type=EST; length=760bp
CAGTCTAGGGCAACTCGGTCCGGTTCTCGTTCTCGGGTATCGGGTGGCCG
AACTCTTCGAAGAAGTGGGGCAGGTTCATCGGGGAGCCGCTGTAGACGGT
CTGCCCACGGGATAAGAATATCATCCGGTCTAACAACCCGAGAATACGGT
AACTCGGCTGGTGGATCGACATAATTACGATACTGCCACTCTGAGCGATT
CTCTGCAGGACCTTCACGACCATGTAAGCACTCGTGGAGTCCAACCCCGA
GGTTGGCTCGTCGAGGAACAACAAGATTGGGTCGTGAATTATGTCGATTC
CAATCGAGACACGACGTCGTTCGCCGCCCGACACTCCCCTGTGTCCTTCG
TCTCCTATAACTGTCTTTGCCGCGTTCCTTAAGCCGAGCTGATCGATCAG
AGCTTGGACGCGAATCTTCTTCTTCGACTTCGATAGCGTACGTGGCAGCC
GAAACTCGGCAGCGAACATCAGCGTCTCCTCGACGGTGAGCATCGAGAAC
AGAAGGTCGTCTTGCATGACGTAAGCTGATATCACCTTCAGCATCCTCGA
CTCCAACACTTCGCCGTTTAGCTTGATGGTACCTTTCAAGCTCTCTTTCG
CGATACGATTCGCCAGCGCGTCGATTAGAGTCGACTTCCCGGAGCCGCTA
GCCCCAAGCACCGCCATGATTTCTCCGTCGCGCGCCTCGCCGGAGATGTC
GTTCAACAGAGTCTTTGTTTTGGAGAACAAGTTCTCGCCTGGAACGGGAT
CCGTCGCCCT
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