CV885215

Overview
NameCV885215
Unique NameCV885215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13
Identity = 40/118 (33.90%), Postives = 70/118 (59.32%), Query Frame = -3
Query:  422 SVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD----LVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVG 760
            + + G+ G+IAPEY  T   +EK+D++ +G+++LEL+TG+   D      D    L+ WV   L +K ++ ++DP L   + E E+ +++ + L CT   P+ RP M  VV++L+  G
Sbjct:  466 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 583          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.787e-13
Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = -3
Query:  431 GSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL-----DCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQ 748
            G+ GY++PE   +  +  +SDIYSFG+V+LE++TG+ PV     ++D+VKWV   L +  V  +L+P L     +    EE    + +GL CT+  P++RP M  VV +L+
Sbjct: 1006 GTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPV-MFTQDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCTATDPLDRPTMSDVVFMLE 1115          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.787e-13
Identity = 41/123 (33.33%), Postives = 68/123 (55.28%), Query Frame = -3
Query:  395 SVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFK-EEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRSKTGK 760
            +V+AG+ GY+ PEY  T  + EKSDIYSFG+V+LE+++ R  +     +  +V+WV   + +  +  ++DP L   +    + K + + + C S     RP M RVV  L+E      S+ G+
Sbjct:  737 TVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSREKPHIVEWVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVVNELKECLISETSRIGE 859          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.753e-13
Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = -3
Query:  377 SVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPE-FG-EKDLVKWVCSTLDQKGVDHVLDPKLDCCFK-EEICKVLNIGLFCTSPLPINRPAMRRVVKLLQE-VGAENRSKTGKKDGKLS 760
            SV  G+ GY+ PEY  +  + EKSD+YSFGVV+ EL++G+ PV  E FG E ++V W  S + +  V  ++DP +    K E + +V  +   C      NRP M+ V+  +Q+ +  E  ++ G K    S
Sbjct:  765 SVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRIERGNENGLKSSSSS 896          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.753e-13
Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = -3
Query:  431 IAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD--LVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQ 754
            IAG+ GY+APEYA    + +K+D+YSFG+V LE+V GR             L+ WV    ++  +  ++DP+L   + +EE   ++ I + CTS  P  RP+M  VVK+L+
Sbjct:  786 IAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.753e-13
Identity = 47/121 (38.84%), Postives = 63/121 (52.07%), Query Frame = -3
Query:  428 IAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRL--PVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEI----------CKVLNIGLFCTSPLPINRPAMRRVVKLLQE 754
            IAG+ GY+APEY     + EK+D+YSFGV++LE+  G       PE G      W   TL++      L   LD C K+E           CKVL +GL CT   P  RP+M  V+++L E
Sbjct:  476 IAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFVPETGHLLQRVWNLYTLNR------LVEALDPCLKDEFLQVQGSEAEACKVLRVGLLCTQASPSLRPSMEEVIRMLTE 590          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13
Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = -3
Query:  398 SVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRSKTG 760
            +V+AG+ GY+ PEY  T  + EKSD+YSFG+++LE++T R  +D    +  + +WV   L +  +  ++DP L+  +    + K + + + C +     RP M +VV  L E  A   ++ G
Sbjct:  738 TVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVVIELNECLASENARGG 859          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13
Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = -3
Query:  350 IAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKL--DCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKKDGKLSPYYHEDASD 754
            I+   GY APE   T   ++ SD+YSFGVV+LEL+TG+ P+    G++   LV+WV S + ++    V D +L      +EE+ ++L I + C       RP M  +V+L++ VG  NR  + + + +L P     AS+
Sbjct:  495 ISRQAGYRAPEVTDTRKSSQLSDVYSFGVVLLELLTGKSPIHTTAGDEIIHLVRWVHSVVREEWTAEVFDIELLRYTNIEEEMVEMLQIAMSCVVKAADQRPKMSDLVRLIENVG--NRRTSIEPEPELKPKSENGASE 631          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13
Identity = 45/142 (31.69%), Postives = 79/142 (55.63%), Query Frame = -3
Query:  353 SVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEK-----DLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAENRSKTGKKDGKLSPYYHEDAS 760
            + + G+ G+IAPEY  T   +EK+D++ FG+++LEL+TG   +  EFG+       +++WV     +  V+ ++D +L   + + E+ ++L + L CT  LP +RP M  VV++L+  G   R          S +YH + S
Sbjct:  456 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAL--EFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLEGDGLAERWAASHDH---SHFYHANMS 592          
BLAST of CV885215 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = -3
Query:  416 SVIAGSCGYIAPEYAYTLGVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW----VCSTLDQKGVDHVLDPKLDCCFKEEICKVLNIGLFCTSPLPINRPAMRRVVKLLQEVGAE 760
            +VIAG+ GY+APEY  T     + D+YS+GV+ +EL TGR  VD   GE+ LV+W    +   +  KG    L         E++ ++L IG+ CT+  P  RP M+ V+ +L ++  +
Sbjct:  975 TVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVDG--GEECLVEWARRVMTGNMTAKGSPITLSGTKPGNGAEQMTELLKIGVKCTADHPQARPNMKEVLAMLVKISGK 1091          
The following BLAST results are available for this feature:
BLAST of CV885215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
SERK2_ARATH1.634e-1333.90Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y4361_ARATH2.787e-1337.84Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH2.787e-1333.33Probable leucine-rich repeat receptor-like protein... [more]
Y1677_ARATH4.753e-1335.61Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH4.753e-1337.84Probable LRR receptor-like serine/threonine-protei... [more]
CRK42_ARATH4.753e-1338.84Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y5182_ARATH6.208e-1331.97Probable LRR receptor-like serine/threonine-protei... [more]
Y4374_ARATH6.208e-1334.53Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y2239_ARATH6.208e-1331.69Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH6.208e-1336.13Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013D02_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885215 ID=CV885215; Name=CV885215; organism=Citrus sinensis; type=EST; length=774bp
ACACCTGAGCGATGCCAATTGCCAGGGCTTTAAAGCATCACTAAACAGTG
TATTCATAACTTTGAAGTTTGAAATAGCTACTAGCTTTGTTTTGTAGTAA
ATACCCATCAAGATACTCAATTAATTACATATAAAACTACTTAATAACTC
CCATTCTTCTTTTCTTTCATCCTCTTGGCCCCTCAATCTGGAAAATTTTC
CCTTCTTTTATCCCATTCCCACCCACCCTGTAAAGCAAGCACCGAGTGGG
TGTAATAATTGGAATGTGAGCTTATGGTACTCCTTAAACAAACCATCCTG
CTTTTCAAACAAAACCTTTGAGCAAAAGTTCTCAAGCTACACTTCCCTGA
TCAGAAGCATCTTCATGGTAATAAGGTGACAACTTCCCGTCTTTTTTACC
GGTCTTGGAACGGTTCTCCGCGCCCACTTCTTGCAACAACTTCACCACCC
TTCTCATTGCAGGGCGGTTGATGGGGAGAGGGCTAGTGCAAAATAGGCCA
ATGTTGAGGACCTTGCATATTTCTTCCTTAAAACAGCAATCGAGTTTGGG
ATCAAGAACATGGTCCACTCCTTTCTGATCCAAAGTAGAGCAGACCCATT
TGACCAAATCCTTCTCCCCAAACTCCGGATCGACTGGCAGTCTTCCAGTT
ACTAACTCAAGAATGACTACTCCGAAACTGTATATGTCGCTCTTCTCGTT
CACACCAAGTGTGTAGGCATATTCTGGGGCGATGTAACCACAGGAACCAG
CAATGACAGACATTGATTTAGGCT
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