CV885168

Overview
NameCV885168
Unique NameCV885168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.059e-27
Identity = 76/243 (31.28%), Postives = 123/243 (50.62%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGV YG++A+NLP       L ++  I+K+R+Y  D  I KAL  + + I++   + D+ ALA+  + A  W+  N+   +P  K   I++GNEV  +N+                      L  KIKVST     +LA + PP    F  +    +  I++FL  +  P   N YP+F +  +     L++ LF     +  + TG  Y N+FDA +D+++ A+   G  +VEI+V+E+GWP
Sbjct:   36 IGVCYGEIANNLPSEQDVINLYKANGIRKMRIYYPDTNIFKALNGSNIEIILEVPNQDLEALANS-SIANGWVQDNIRSHFPYVKFKYISIGNEVSPTNNGQYSQFLLHAMKNVYNALAAAGLQDKIKVSTATYSGLLANTYPPKDSIFREELKSFINPIIEFLARNNLPLLANIYPYFGHIYNTVDVPLSYALFNQ---QETNSTG--YQNLFDALLDSIYFAVEKAGGPNVEIIVSESGWP 272          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.059e-27
Identity = 78/244 (31.97%), Postives = 124/244 (50.82%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXS-LGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGV YG++A+NLP      KL  S +I+K+R+Y  +  +  AL  + + I++   + D+ ALA +P+    W+  N+   +P  K   I VGNEV    D    ++               + L  +IKVST   + +L  + PP    F  +    +  I+ FL  H  P   N YP+F +  D  P  L + LF+   G  D+G    Y N+FDA VD+++ A   +G +++EI+V+E+GWP
Sbjct:   26 IGVCYGKIANNLPSDQDVIKLYNSNNIKKMRIYFPETNVFNALKGSNIEIILDVPNQDLEALA-NPSKRQGWVQDNIRNHFPDVKFKYIAVGNEVDPGRDSGKYARFVGPAMENIYNALSSAGLQNQIKVSTATYLGLLTNTYPPRDSIFRDEYKSFINPIIGFLSRHNLPLLANIYPYFGHADDNVP--LPYALFK-QQGLNDAG----YQNLFDALVDSMYFATEKLGGQNIEIIVSESGWP 261          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.899e-27
Identity = 81/248 (32.66%), Postives = 127/248 (51.21%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIIL--ITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXS-LGGKIKVST-VHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPR-PETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGVN+G  A +  PPA   +LL+   IQK++L+ AD AI+KAL+ TG+ +++G  +  +  LA    AA +W++ NV     ++ + +  + VGNE  +                        + L  ++KV+  ++A    + S+ PS G F  +  D M  I++FL D+G+PFTIN YPF +  +DP  P   AF       G   +  G  Y N+ DA  D +  +L   GF ++ I+V E GWP
Sbjct:   27 IGVNWGSQARHPLPPATVVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLLAPLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLKAFNGTFEGITLPALQNIQSAIIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPEIRDLMLNIVKFLSDNGAPFTINIYPFISLYNDPNFPVEFAFF---DGTGTPINDNGRIYDNVLDANYDTLVWSLQKNGFGNLTIIVGEVGWP 271          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25
Identity = 78/245 (31.84%), Postives = 125/245 (51.02%), Query Frame = 2
Query:  131 GVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSF---IRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRV-DSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            GV YG+  + LP PA    L    +I+++R+Y  D   ++AL  + + +++G  + D+  +A+    A  W+ +NV   Y   K   I VGNEV  ++ +   +                  LG +IKVST     +   + PPS+G F   +RQ  +  I+ FL  + +P  +N YP+FA  ++   + L + LF  +   V D+G G  Y N+FDA +DA +SAL       +EIVV+E+GWP
Sbjct:   27 GVCYGRQGNGLPSPADVVSLCNRNNIRRMRIYDPDQPTLEALRGSNIELMLGVPNPDLENVAASQANADTWVQNNVRN-YGNVKFRYIAVGNEVSPLNENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQ-FIEPIINFLVTNRAPLLVNLYPYFAIANNADIK-LEYALFTSSEVVVNDNGRG--YRNLFDAILDATYSALEKASGSSLEIVVSESGWP 266          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25
Identity = 77/249 (30.92%), Postives = 126/249 (50.60%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPAS---KIILITVGNEVMISNDQNLISQ-XXXXXXXXXXXXXXXSLGGKIKVSTVHAM-SVLAQSDPPSSGSFIRQD---TMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +G+N+G  A +  PP+   +LL+S  I K++L+ ADP +++AL+ + +G+ IG  +  + +L +    A  W++ NV  ++      +I  + VG E  + +  N                    +L  ++KV    +  S L++S  PSSG F R D   TM  +L FL  H SPF +   PF ++  + +  +L F LF+  A     G    Y N FD   D + SAL  +GF +V+IVV++ GWP
Sbjct:   26 VGINWGTEASHPLPPSKVVELLKSNGIVKVKLFDADPKVLRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPFLQSYGNQYKPFVIGAAMNIQNALVKANLANEVKVVVPSSFDSFLSESGRPSSGHF-RADLNKTMIELLSFLTKHHSPFFVTISPFLSFHQN-KNISLDFSLFKETAKAHKDGRK-TYRNSFDLSYDTLVSALFTIGFSEVDIVVSKIGWP 271          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 77/248 (31.05%), Postives = 124/248 (50.00%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIIL--ITVGNEVMISN-DQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDP-PSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPR-PETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IG N+G  A +  PP    ++L+   IQK++L+ A+   ++AL  +G+ +++G  +  +  LAS   AA +W+  NV        + +  + VGNE  +S  + + +S                 L  ++KV+      V   S   PS G F    +D M  I++FL ++G PFT+N YP+ +  ++P  P   AF  F  NA  ++ G G  Y NMFDA  D +  AL   GF ++ I++ E GWP
Sbjct:   22 IGANWGTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTFPALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRANIRDLMITIVKFLSENGGPFTVNIYPYISLYTNPDFPVDYAF--FDGNAQPLNDG-GTFYYNMFDANYDTLVHALEKNGFGNMPIIIGEIGWP 266          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.126e-21
Identity = 76/251 (30.28%), Postives = 120/251 (47.81%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLP--FYPASKIILITVGNEVMI-SNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVL---AQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFA-YQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +GVN+G +A +  PP    ++L+  +I K++L+ AD   + ALA +G+ +++   +  +  + S  + A  W+  NV    F     I  + VGNE  + S + + I+                 LG  +K +      V    A +  PS+G F R D    M  I+ FL  + +P TIN YPF + Y +D  P   AF     +     +  GI Y N+FDA  D + S+L A+G  D+ I+V E GWP
Sbjct:   25 LGVNWGTMATHKLPPKTVVQMLKDNNINKVKLFDADETTMGALAGSGLEVMVAIPNDQLKVMTSY-DRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKSYNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRF-RPDIIGQMTQIVDFLGKNNAPITINIYPFLSLYGNDDFPLNYAFF----DGAEPINDNGIDYTNVFDANFDTLVSSLKAVGHGDMPIIVGEVGWP 269          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13B_SOYBN (Glucan endo-1,3-beta-glucosidase (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 64/192 (33.33%), Postives = 96/192 (50.00%), Query Frame = 2
Query:  317 SDPNAATQWINSNVLPFYPASKIILITVGNEV------------MISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +D NAAT W+N  V P+        I VGNE+             ++N QN IS                     IKVST    +++  S PP+ G F    +  ++ I+ FL  +G+P   N YP+FAY +D +   LA+ LF    G  D G    Y N+FDA +D++++AL  +G  +++IVV+E+GWP
Sbjct:   18 TDSNAATDWVNKYVTPYSQDVNFKYIAVGNEIHPNTNVAQYILSAMTNIQNAISSRKFT----------------IKVSTAIDSTLITNSYPPNDGVFTSDAEPYIKPIINFLVSNGAPLLANVYPYFAYAND-QSIPLAYALFTQQ-GNNDVG----YQNLFDAMLDSIYAALENVGASNLQIVVSESGWP 187          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 58/205 (28.29%), Postives = 95/205 (46.34%), Query Frame = 2
Query:  242 IIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +  AL  + + I++     D+ +L +DP+ A  W+  N++  +P  K   I VGN+V   N+                      L  +IKVST     +LA + PP    F  +    +  I+QFL  H  P   N YP+F +  +     L++ LF              Y N+FDA +D+++ A+   G ++VEI+V+E+GWP
Sbjct:    2 VFNALRGSNIEIILDVPLQDLQSL-TDPSRANGWVQDNIINHFPDVKFKYIAVGNKVSPGNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANTYPPKDSIFRGEFNSFINPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALFTQQEANPAG-----YQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWP 200          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.143e-16
Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 2
Query:  491 SLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQP---NAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +L  +IKVST HA S++  + PPS   F +     M  +LQFL   GSP  +N YP++ Y  +     L  CLF+P   +   VD  T + Y N+ DA VDA + ++  +   DV ++V E+GWP
Sbjct:   55 NLHTQIKVSTPHAASIMLDTFPPSQAYFNQTWHSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGVVPLDNCLFEPLTPSKEMVDPNTLLHYTNVLDAMVDAAYVSMKNLNVSDVAVLVTESGWP 179          
The following BLAST results are available for this feature:
BLAST of CV885168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13D_TOBAC3.059e-2731.28Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13A_SOLLC3.059e-2731.97Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E135_ARATH8.899e-2732.66Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E13H_TOBAC2.863e-2531.84Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E139_ARATH3.739e-2530.92Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis ... [more]
E136_ARATH8.329e-2531.05Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E138_ARATH1.126e-2130.28Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]
E13B_SOYBN5.229e-1933.33Glucan endo-1,3-beta-glucosidase (Fragment) OS=Gly... [more]
E13I_TOBAC8.920e-1928.29Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E131_ARATH4.143e-1637.60Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885168 ID=CV885168; Name=CV885168; organism=Citrus sinensis; type=EST; length=855bp
CAATTTCACTTTCTTCTCCATCTATTTCTCTCTGTCCATGGCCAAGGCCA
ACTCCAACTCCTCACTCTTCCTCTTCGTCTCTCTCCTCCTTTTTCAAGTT
CTTCACTTCTCAAGTTCGCAGTCATTCATCGGAGTGAACTACGGCCAAGT
AGCGGATAACCTGCCCCCGCCGGCGGCTACAGCGAAGCTTCTGCAATCGA
CTTCTATACAGAAATTGAGGCTCTACGGTGCAGATCCGGCCATCATCAAA
GCACTAGCAAACACTGGGGTTGGTATTGTAATTGGCGCTTCCAGTGGAGA
TATTCCGGCTCTCGCTTCTGATCCTAACGCCGCTACTCAGTGGATCAACT
CAAACGTGTTGCCTTTTTACCCCGCCAGCAAAATAATTCTCATCACCGTT
GGGAATGAGGTGATGATATCAAATGACCAAAATCTAATCAGTCAGCTTCT
TCCGGCAATGGCAAATATGCAAAACGCTCTTAACGCGGCCTCACTTGGTG
GGAAAATTAAGGTGTCAACGGTTCATGCGATGTCCGTGTTGGCACAATCC
GACCCGCCGTCCTCCGGGTCATTCATCCGCCAAGACACTATGAGAGGGAT
TTTGCAGTTTCTTAAAGACCACGGCTCCCCTTTTACCATCAACCCGTACC
CGTTTTTCGCTTATCAAAGTGACCCGAGACCCGAGACTCTTGCCTTCTGT
TTGTTTCAACCCAACGCGGGACGAGTTGACTCCGGGACCGGGATCAAATA
CATGAACATGTTCGACGCCCAGGTTGATGCTGTACATTCAGCCTTGAATG
CAATGGGGTTCAAGGATGTCGAGATTGTGGTTGCAGAGACAGGGTGGCCT
TACCG
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