EY665370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 2.114e-65 Identity = 122/175 (69.71%), Postives = 137/175 (78.29%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASSMISS V T NRA A VAPFTGLKS + FP T+KTNNDI SIASNGGRVQCM+VWP TG KKFETLSYLP L D L KE+ YL+R GWIPCLEFELE G+VYRE+H+SPGYYDGRYWTMWKL ++GCTDA+QVLKE+ E + YP F+R G DN RQVQ F+ Sbjct: 1 MASSMISSPAVTTVNRAG---AGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFI 171
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 2.114e-65 Identity = 116/175 (66.29%), Postives = 141/175 (80.57%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM+VWPP G+KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKL M+GCTD +QV+ E+ E +K YP +F+R G DN RQVQ F+ Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSISAFPVTRK-NNDITSVASNGGRVQCMQVWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFI 174
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 2.114e-65 Identity = 119/173 (68.79%), Postives = 139/173 (80.35%), Query Frame = 1 Query: 19 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGRV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFELEKG+VYREH+KSPGYYDGRYWTMWKL M+G TDA+QVLKE+ EV YP +FVR G DN RQVQ F+ Sbjct: 2 ASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.761e-65 Identity = 119/173 (68.79%), Postives = 139/173 (80.35%), Query Frame = 1 Query: 19 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGRV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFELEKG+VYREH+KSPGYYDGRYWTMWKL M+G TDA+QVLKE+ EV YP +FVR G DN RQVQ F+ Sbjct: 2 ASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.049e-64 Identity = 115/175 (65.71%), Postives = 140/175 (80.00%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKL M+GCTD +QV+ E+ E +K YP +F+R G DN RQVQ F+ Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSVSAFPVTRK-NNDITSVASNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFI 174
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.370e-64 Identity = 120/177 (67.80%), Postives = 140/177 (79.10%), Query Frame = 1 Query: 13 MASSMISSATVATANRASL--AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASSM+S+A A A A+ AQA+MVAPF GLKS ++FP T+K+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ GWIPC+EFELE +VYRE+H+SPGY DGRYWTMWKL MYGCTD QVL EV E +K YP +F+R G DNKRQVQ F+ Sbjct: 1 MASSMMSNAATAVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVSFI 176
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.337e-64 Identity = 119/175 (68.00%), Postives = 140/175 (80.00%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++S+A A AS AQA+MVAPF GLKS ++FP T+K+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ +GWIPC+EFELE +VYRE+H+SPGY DGRYWTMWKL MYGCTD QVL EV E +K YP +F+R G DNKRQVQ F+ Sbjct: 1 MASSLMSNAITAVVG-ASGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.987e-64 Identity = 115/175 (65.71%), Postives = 142/175 (81.14%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++SSA VAT +R AQASMVAPFTGLKS+ FPATKK N+DITS+ASNGGRVQCMKVWP +K++ETLSYLPPL+ + L ++++YL+ + W+PCLEFE + G+VYREHH SPGYYDGRYWTMWKL M+GCTD QVL E+ E +KEYP +F+R G D+ RQVQ F+ Sbjct: 1 MASSVLSSAAVATVSRTP-AQASMVAPFTGLKSTVGFPATKK-NDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.987e-64 Identity = 115/171 (67.25%), Postives = 140/171 (81.87%), Query Frame = 1 Query: 25 MISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 M S+A VAT A AQASM+APFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS+E LL+E+ YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKL M+GCTDATQVL EV E +K YP +++R G DN RQVQ F+ Sbjct: 6 MSSAAAVATGTNA--AQASMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFI 174
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_TRIRP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 5.207e-64 Identity = 115/172 (66.86%), Postives = 139/172 (80.81%), Query Frame = 1 Query: 22 SMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 ++ISSA V T NRA + QA++ PFTGLKSS+ FP TKK NNDITSI SNG RV CM+VWPP G KKFETLSYLPPL+DE LLKE+ YL+R GW+PC+EFELEKG+V+R+++ SPGYYDGRYWTMW+L ++G TDA QVLKEV E + EYP +F+R G DN RQVQ F+ Sbjct: 2 ALISSAAVTTINRAPV-QANLATPFTGLKSSAGFPVTKK-NNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171 The following BLAST results are available for this feature:
BLAST of EY665370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665370 ID=EY665370; Name=EY665370; organism=Citrus sinensis; type=EST; length=998bpback to top |