EY665369

Overview
NameEY665369
Unique NameEY665369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1068
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665369 vs. ExPASy Swiss-Prot
Match: ERD2_PLAF7 (ER lumen protein retaining receptor OS=Plasmodium falciparum (isolate 3D7) GN=ERD2 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.054e-28
Identity = 61/144 (42.36%), Postives = 100/144 (69.44%), Query Frame = 2
Query:   95 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFATRYLDIFTNYISFYNTIMKLIFLGISFSIVWYIKRHKI-VHRSYDKDQDTFR-HWFIVLPCLVLALLINERFTFKEVMWTFSLY*EPVAILPHLELFKK 520
            MNIFRL GD+ HL S+ +L++K+   K+C GIS + QELY +VF  RY+D+F  ++SFYNT+MK+ F+ ++ +   Y+ R K+ + ++Y++  D F+   +++ PCLVL+LL  + +    ++W+FS++ E VAILP L L +K
Sbjct:    1 MNIFRLIGDILHLVSMYILIMKLKKSKNCIGISCRMQELYLIVFLCRYIDLFFVFVSFYNTVMKITFI-LTIAYTIYLIRLKLPISQTYNRKVDNFKSEKYLIPPCLVLSLLTCKTYNLYNILWSFSIWLESVAILPQLVLLEK 143          
BLAST of EY665369 vs. ExPASy Swiss-Prot
Match: ERD2_SCHPO (ER lumen protein retaining receptor OS=Schizosaccharomyces pombe GN=erd2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.682e-23
Identity = 57/143 (39.86%), Postives = 91/143 (63.64%), Query Frame = 2
Query:   95 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFATRYLDIFTNYISFYNTIMKLIFLGISFSIVWYIKRHKIVHRSYDKDQDTFRHWFIVLPCLVLALLINERFTFKEVMWTFSLY*EPVAILPHLELFKKT 523
            M  F   GDM HLA++ +LL ++   K+C+G+SLK+  L+ LV+ TRYL++F  Y S Y  +M+++F+  S S + Y+     +  +YDK  DTFR  +I+  C VLAL+    +T   ++WTFS++ E VAILP L + +++
Sbjct:    1 MTFFSALGDMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTRYLNLFWRYKSLYYFLMRIVFIA-SESYICYLML-MTLRPTYDKRLDTFRTEYILGGCAVLALIYPTSYTISNILWTFSIWLESVAILPQLFMLQRS 141          
BLAST of EY665369 vs. ExPASy Swiss-Prot
Match: ERD2_YEAST (ER lumen protein retaining receptor OS=Saccharomyces cerevisiae GN=ERD2 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.748e-23
Identity = 59/146 (40.41%), Postives = 92/146 (63.01%), Query Frame = 2
Query:   95 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFATRYLDIFT-NYISFYNTIMKLIFLGISFSIVWYI---KRHKIVHRSYDKDQDTFRHWFIVLPCLVLALLINERFTFKEVMWTFSLY*EPVAILPHLELFKK 520
            MN FR+ GD++HL S+L+L+  I T +   GIS KTQ LYALVF TRYLD+ T +++S YN +MK+ F+  +  IV  +   KR   +  +     DTF+   +++   ++++  + +FTF E+ W+FS++ E VAILP L +  K
Sbjct:    1 MNPFRILGDLSHLTSILILIHNIKTTRYIEGISFKTQTLYALVFITRYLDLLTFHWVSLYNALMKIFFIVSTAYIVVLLQGSKRTNTIAYNEMLMHDTFKIQHLLIGSALMSVFFHHKFTFLELAWSFSVWLESVAILPQLYMLSK 146          
The following BLAST results are available for this feature:
BLAST of EY665369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ERD2_PLAF75.054e-2842.36ER lumen protein retaining receptor OS=Plasmodium ... [more]
ERD2_SCHPO1.682e-2339.86ER lumen protein retaining receptor OS=Schizosacch... [more]
ERD2_YEAST3.748e-2340.41ER lumen protein retaining receptor OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665369 ID=EY665369; Name=EY665369; organism=Citrus sinensis; type=EST; length=1068bp
CCACGCGTCCGGAAATCACATTCCTGGTGATCCAAACACTTTGTAATATT
ACATTTTTCCAAAAAAAAGAAGTAAGGAAAAAGAAAAAAAAAAGATGAAT
ATATTCAGGTTAGCAGGGGACATGACCCATTTGGCCAGCGTCCTTGTTTT
GCTCCTCAAGATCCACACCATCAAATCTTGTGCTGGTATATCCCTGAAGA
CTCAGGAACTCTACGCTCTCGTCTTTGCTACTCGCTACTTGGATATATTT
ACAAATTACATTTCATTCTATAATACTATAATGAAGTTAATATTCCTGGG
GATCTCTTTCTCAATTGTTTGGTACATAAAGCGCCATAAGATTGTTCATA
GATCTTATGATAAGGACCAAGACACATTTCGCCATTGGTTTATCGTGCTG
CCTTGCCTGGTTCTGGCCTTACTTATAAATGAGAGGTTTACCTTTAAAGA
GGTAATGTGGACATTTTCTCTATATTAAGAACCCGTTGCCATACTTCCTC
ACCTTGAATTGTTCAAAAAAACAGAAATATCGATAACTTGACGGGAAATT
TGTTTTTCTCTCCGGCGCATCCCGACATTGAAAATATTAACTGGATTTTC
GCTTTTCCCTGGAGAACCCAACTTCCTTTGATAACTTGAATAGCGGGTTT
GTCCAAATTGGCTCTCCCAAATTTCTTTATATTTATTTCAAGCTGGAAAA
AATGCGAAACTTGATTTACCCCTTGGGCATTTTTAACAAAGGTGGCAAAC
ACAACAGGGATAGTTTTGGGGGTTAAGGGGTGAAATTTTCTGTTTTTTAA
CCCCCTTTGGGGGCCCGCGCCCGGGAAAGGGGAAGGGGGTTTTTTTTTTT
TCCTGGCACACCATGGGGTTTAACACCAAACCCAAGGTTTGTGGGGTTCC
CGAAATATTGCACACAAAGAGCCATCCTACCCGCGTTTTTTTTGTGTAAA
CCACTTATAATAATTTGTTTTGTGTTTTCTCCCACCAAATTTGAATATTT
TTCTTAAAAAAAAAAAAAAAAAAGGGCACATAGAAGAAATAAAGGCGGGG
AAACATTATTGATTCAAT
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