CV885078

Overview
NameCV885078
Unique NameCV885078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 5.028e-25
Identity = 72/233 (30.90%), Postives = 113/233 (48.50%), Query Frame = -1
Query:  185 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYP-ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 856
            +S + +Q  CGSC++F ++  L  R  I    + +  ++                G+P + A +Y    GVV E C PY  +         P  P   C+R        + +S++Y +  +    +   +  E+ K+GP+ V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G DYWI+ N W   WG  GYF+I+RG++EC IE   +A +P  K
Sbjct:  245 VSPVRNQESCGSCYSFASLGMLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDA-------PCKPKENCLR--------YYSSEYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPK 461          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: TINAL_HUMAN (Tubulointerstitial nephritis antigen-like OS=Homo sapiens GN=TINAGL1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.567e-25
Identity = 76/238 (31.93%), Postives = 108/238 (45.38%), Query Frame = -1
Query:  206 LDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPI-SAWRYFVHHGVVTEECDPYF----DSTGCSHP--------GCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 844
            LDQG+C   WAF      SDR  IH   +++  ++                G  +  AW +    GVV++ C P+     D  G + P        G      T  C    V  N +++ +       YR+ S+ ++IM E+ +NGPV+    V+EDF  YK G+Y H    +         G H+VK+ GWG  T  DG    YW  AN W  +WG  G+F+I RG NEC IE  V+
Sbjct:  221 LDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPVLSPQNLLSCDTHQQQGCRGGRLDGAWWFLRRRGVVSDHCYPFSGRERDEAGPAPPCMMHSRAMGRGKRQATAHCPNSYVNNNDIYQVT-----PVYRLGSNDKEIMKELMENGPVQALMEVHEDFFLYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGHFRIVRGVNECDIESFVL 453          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: YCF2E_CAEEL (Uncharacterized peptidase C1-like protein F26E4.3 OS=Caenorhabditis elegans GN=F26E4.3 PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 8.577e-25
Identity = 77/234 (32.91%), Postives = 107/234 (45.73%), Query Frame = -1
Query:  206 ISRILDQGHCGSCWAFGAVEALSDRFCI--HFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGC---EPAYPTPKCVRKCVKKNQLWRNSKHYSISA-YRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKH--------ITGDVMGGHAVKLIGWGTSDDGED---YWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 856
            I  + DQG CGS W+       SDR  I     +N +LS +                GY   AW Y    GVV + C PY          C   +  Y   + +R C   +Q   +S  + ++  Y+++S  EDI  E+  NGPV+ +F V+EDF  Y  GVY+H         +    G H+V+++GWG          YW+ AN W   WG DGYFK+ RG N C IE  V+
Sbjct:  198 IHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLS-SQQLLSCNQHRQKGCEGGYLDRAWWYIRKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLR-CPSGSQ---DSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVVHEDFFMYAGGVYQHSDLAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGENHCEIESFVI 426          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.577e-25
Identity = 72/233 (30.90%), Postives = 112/233 (48.07%), Query Frame = -1
Query:  185 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYP-ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 856
            +S + +Q  CGSC++F ++  L  R  I    + +  ++                G+P + A +Y    GVV E C PY            P  P   C+R        + +S +Y +  +    +   +  E+ K+GP+ V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G +YWI+ N W  +WG  GYF+I+RG++EC IE   VA +P  K
Sbjct:  245 VSPVRNQESCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEESCFPYTAKDS-------PCKPRENCLR--------YYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIAVAAIPIPK 461          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.911e-24
Identity = 76/239 (31.80%), Postives = 109/239 (45.61%), Query Frame = -1
Query:  206 LDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPI-SAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV----------RKCVKK---NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 844
            LDQG+C   WAF      SDR  IH   +++  ++                G  +  AW +    GVV++ C P+           + A PTP+C+          R+   +   +Q+  N  +     YR+ SD ++IM E+ +NGPV+    V+EDF  Y+ G+Y H              G H+VK+ GWG  T  DG    YW  AN W   WG  G+F+I RG NEC IE  V+
Sbjct:  220 LDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDTHHQKGCRGGRLDGAWWFLRRRGVVSDNCYPF-----SGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTPVYRLASDEKEIMKELMENGPVQALMEVHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGINECDIETFVL 453          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.911e-24
Identity = 73/235 (31.06%), Postives = 115/235 (48.94%), Query Frame = -1
Query:  185 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYP-ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWR--NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 856
            ++ + +QG CGSC++F ++  +  R  I      +  ++                G+P + A +Y    G+V E+C PY   TG   P              C  K   +R  +S+++ +  +    +   +  E+   GP+ V+F VY+DF HY+ GVY H TG         +  HAV L+G+GT +  G DYWI+ N W  SWG +GYF+I+RG++EC IE   +A  P  K
Sbjct:  246 VTPVRNQGSCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEDCFPY---TGTDSP--------------CRLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPMAVAFEVYDDFLHYRKGVYHH-TGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAIESIALAATPIPK 462          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.855e-20
Identity = 57/199 (28.64%), Postives = 85/199 (42.71%), Query Frame = -1
Query:  248 HCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV--RKC--VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 832
            +CGSCWA G+  AL+DR  I        ++                 G  +  W Y   HG+  E C+ Y          C+       C   ++C  ++   LWR   + S+S        E +MAEIY NGP+       E  ++Y  G+Y       +  H + + GWG S+DG +YWI+ N W   WG  G+ +I
Sbjct:   90 YCGSCWAHGSTSALADRINIKRKGAWPSTLLSVQNVIDCGNAGSCEGGNDLPVWEYAHKHGIPDETCNNY----QAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGR------EKMMAEIYANGPISCGIMATERMSNYTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI 278          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.870e-20
Identity = 68/220 (30.91%), Postives = 94/220 (42.73%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAE-IYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 856
            +S + +Q HCGSCW F    AL   +    G N+SLS                  G P  A+ Y  ++G + TEE  PY    G  H   E                    N+    + +  I  + ED +   +    PV V+F V + F  YKSGVY   T D  G       HAV  +G+G  ++G  YW++ N W   WG +GYFK++ G N C I
Sbjct:  156 VSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAE--------------------NAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVY---TSDHCGTTPDDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAI 351          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.085e-19
Identity = 58/202 (28.71%), Postives = 87/202 (43.07%), Query Frame = -1
Query:  248 HCGSCWAFGAVEALSDRFCIH---FGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV--RKC--VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 832
            +CGSCWA G+  A++DR  I       ++ LSV                    +  W Y   HG+  E C+ Y          C+       C   ++C  ++   LWR   + S+S        E +MAEIY NGP+       E  ++Y  G+Y       +  H + + GWG S+DG +YWI+ N W   WG  G+ +I
Sbjct:   90 YCGSCWAHGSTSAMADRINIKRKGAWPSILLSVQNVIDCGNAGSCEGGND---LPVWEYAHKHGIPDETCNNY----QAKDQDCDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGR------EKMMAEIYANGPISCGIMATEMMSNYTGGIYAEHQDQAVINHIISVAGWGVSNDGIEYWIVRNSWGEPWGEKGWMRI 278          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.085e-19
Identity = 70/222 (31.53%), Postives = 100/222 (45.05%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKN---QLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGG------HAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 856
            +S + +QGHCGSCW F    AL   +   FG  +SLS                  G P  A+ Y  ++G + TEE  PY    G    GC           K   KN   Q+ R+S + ++ A       +++   +    PV V+F V  +F  YK GV+   T +  G       HAV  +G+G  DD   YW++ N W   WG +GYFK++ G N CG+
Sbjct:  153 VSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG----GC-----------KFSAKNIGVQV-RDSVNITLGA------EDELKHAVGLVRPVSVAFEVVHEFRFYKKGVF---TSNTCGNTPMDVNHAVLAVGYGVEDD-VPYWLIKNSWGGEWGDNGYFKMEMGKNMCGV 348          
The following BLAST results are available for this feature:
BLAST of CV885078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CATC_RAT5.028e-2530.90Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
TINAL_HUMAN6.567e-2531.93Tubulointerstitial nephritis antigen-like OS=Homo ... [more]
YCF2E_CAEEL8.577e-2532.91Uncharacterized peptidase C1-like protein F26E4.3 ... [more]
CATC_MOUSE8.577e-2530.90Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
TINAL_RAT1.911e-2431.80Tubulointerstitial nephritis antigen-like OS=Rattu... [more]
CATC_BOVIN1.911e-2431.06Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATZ_RAT2.855e-2028.64Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
ALEU_HORVU4.870e-2030.91Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATZ_MOUSE1.085e-1928.71Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]
ALEUL_ARATH1.085e-1931.53Thiol protease aleurain-like OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885078 ID=CV885078; Name=CV885078; organism=Citrus sinensis; type=EST; length=868bp
TTTTTTTTTTTTTTTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGAT
AGCTTAGGTTCAACGATACACCCCTATAGCTACACATTTGATATATAAAT
AACAACATGAAGGTATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCAA
ACATATCTGCACTTGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAAA
CCAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAAT
CTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAA
TCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACA
GCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTT
GTAGTGAGCAAAATCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCAT
TCTTGTAAATTTCTGCCATTATGTCCTCTGGATCAGAATTGATTCTATAT
GCACTAATACTGTAGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGAC
GCACTTCCTCACACACTTTGGAGTAGGATATGCCGGCTCACAACCAGGGT
GGGAACAGCCAGTACTATCAAAGTAGGGATCACACTCTTCGGTAACAACA
CCATGGTGGACAAAGTATCGCCATGCAGAAATTGGATAACCCCCGTCACA
ACCATCTCCACACAAAAAGCCACAGCAGGCTAAAAGATCATTAACTGATA
GAGATAGGTTCATGCCAAAATGGATGCAGAAACGATCAGATAGCGCTTCA
ACAGCACCAAAAGCCCAACAAGAACCACAATGGCCCTGATCTAGGATCCT
ACTAATGGTGCTGCATTG
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