CV885078

Overview
NameCV885078
Unique NameCV885078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 60/220 (27.27%), Postives = 94/220 (42.73%), Query Frame = -1
Query:  203 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECD-PYFDSTG-CSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVA 856
            ++ + DQG CGSCWA  AV  L   + I     ++LS                   +  +A+   ++ G + EE D PY  + G C     + A     C      K  +++N               E++  E+   GP+ ++       + Y  G+  H   ++   HAV L+G+GT + G  YW L N W   WG DGYF++KR  N CG+   + A
Sbjct:  138 MTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMACDGGLMH--TAFEQLMNAGGLMEEIDYPYQGTKGVCKIDNKKFALSVSSC------KRYIFQNE--------------ENLKKELITMGPIAMAIDA-ASISTYSKGII-HFCENLGLNHAVLLVGYGT-EGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAA 332          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15
Identity = 67/222 (30.18%), Postives = 99/222 (44.59%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVN--XXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDP---EDIMAE-IYKNGPVEVSFTV-YEDFAHYKSGVY--KHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGI 856
            ++ +  QG CG+CWAF AV AL  +  +  G  +SLS                    GY   A++Y + +G +                  + +YP      KC        NSK+ + +  R    P   ED + E +   GPV V     +  F  YKSGVY     TG+V   H V ++G+GT  DG+DYW++ N W  ++G  GY ++ R + N CGI
Sbjct:  135 VTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIE----------------ADASYPYKATDEKC------HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNV--NHGVLVVGYGTL-DGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGI 331          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15
Identity = 58/217 (26.73%), Postives = 90/217 (41.47%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG----SNECGI 856
            ++ + +Q  CGSCW+F A+  +   + I  G  +SLS                       A+ + + ++GV TEE  PY    G  +    P                   NS + +  +Y   +D   +M  +  N P+       E+F +Y  GV+    G  +  HA+ +IG+G    G  YWI+ N W  SWG  GY ++ RG    S  CGI
Sbjct:  135 VNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSYGCKGGWVN---KAYDFIISNNGVTTEENYPYLAYQGTCNANSFP-------------------NSAYITGYSYVRRNDERSMMYAV-SNQPIAALIDASENFQYYNGGVFSGPCGTSLN-HAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGI 327          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.621e-15
Identity = 59/231 (25.54%), Postives = 97/231 (41.99%), Query Frame = -1
Query:  182 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNE----CGIEEDVVAGLPSSKN 856
            ++ + DQG CGSCWAF  + ++     I  G  +SLS                       A+ +   +G+ TE+  PY +  G              C    +       NS   SI  ++ + ++ E+ + +   N P+ VS       F  Y  GV+    G  +  H V ++G+G + DG  YWI+ N W   WG  GY +++RG ++    CGI  +    + +S N
Sbjct:  142 VTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDY-AFEFIQKNGITTEDSYPYAEQDGT-------------CASNLL-------NSPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGRCGTELD-HGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGIAMEASYPIKTSAN 350          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15
Identity = 64/243 (26.34%), Postives = 102/243 (41.98%), Query Frame = -1
Query:  146 STISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNE----CGIEEDVVAGLPSSKNLVKEITSADMFE 862
            + + R+  QG CGSCWAF A  A+     I  G  +SLS                  G  + A+ +   +G +    D  +  TG           T  C    +K  ++   + H  +    +N +     A  Y+  P+ V  +   + + YKSGVYK    ++ G H V ++G+GTS D  DYW++ N W   WG  GY +++R  +E    C +   V    P   N    + S  +F+
Sbjct:  138 AVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVS--DEVYGYTG---------EDTAACKAIEMKTTRVVTINGHEVVP---VNDEMSLKKAVAYQ--PISVMISA-ANMSDYKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEPTGKCAVA--VAPVYPIKSNSSSHLLSPSVFK 361          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 82.0333 bits (201), Expect = 4.717e-15
Identity = 63/215 (29.30%), Postives = 95/215 (44.19%), Query Frame = -1
Query:  221 ILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYED-FAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR---GSNECGI 847
            I  QG CG CWAF A+  +     I  G+ +SLS                  GY    +++ +++G + TEE  PY    G                 +C   N   +N K+ +I  Y  +  + E  +       PV V+     D F  Y SG++    G  +  HAV ++G+GT + G DYWI+ N W+ +WG +GY +I R   G+  CGI
Sbjct:  142 IKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDG-----------------EC---NVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAVD-HAVTIVGYGT-EGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGI 334          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15
Identity = 62/224 (27.68%), Postives = 93/224 (41.52%), Query Frame = -1
Query:  194 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPE-DIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHIT-GDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG-SNECGIEEDVVAGLP 856
            ++ + DQG+CGSCWAF     +  ++  +   ++S S                  G   +A++Y    G+ TE   PY    G                 +C    QL           Y ++S  E ++   +    P  V+  V  DF  Y+SG+Y+  T   +   HAV  +G+GT   G DYWI+ N W   WG  GY ++ R   N CGI    +A LP
Sbjct:  120 VTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEG-----------------QCRYNKQL---GVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQG-GTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIAS--LASLP 320          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15
Identity = 64/217 (29.49%), Postives = 99/217 (45.62%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSV-NXXXXXXXXXXXXXXXXGYPISAWRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKN-GPVEVSFTV-YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGI 856
            ++ +  QG CG+CWAF AV AL  +  +  G  +SLS  N                G+  +A++Y + ++G+ +E   PY    G      +  Y + K    C K  +L   S              ED + E   N GPV V+    +  F  Y+SGVY   +      H V ++G+G   +G+DYW++ N W  ++G  GY ++ R S N CGI
Sbjct:  127 VTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNG------KCRYDSKKRAATCSKYTELPFGS--------------EDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNL-NGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGI 322          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.051e-14
Identity = 61/219 (27.85%), Postives = 96/219 (43.84%), Query Frame = -1
Query:  203 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECD-PYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVA 856
            ++++ +QG CGSCWAF A+  +  ++ I     + LS                   +   A++  +  G V  E D PY    G  +  C  A P+   VR          +   Y +       D   ++  +YKNGP+ V+     D   Y+SG+   +  D    HAV L+G+G  +D   YWI  N W  +WG +GYF+ +R  N CG+  +  A
Sbjct:  138 VTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDRVDQGCDGGLMH--LAFQEIIRIGGVEHEIDYPY---QGIEY-ACRLA-PSKLAVRLS--------HCYQYDLR------DERKLLELLYKNGPIAVAIDCV-DIIDYRSGIAT-VCNDNGLNHAVLLVGYGIEND-TPYWIFKNSWGSNWGENGYFRARRNINACGMLNEFAA 332          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.373e-14
Identity = 55/209 (26.32%), Postives = 84/209 (40.19%), Query Frame = -1
Query:  221 ILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 847
            I DQG CGSCWAF +  AL  R+ I +G     ++                 G+  + + +F   G+  E+ DPY   TG S                C+  + + R    +  + Y      +  +    K GPV ++  V   F +YKSG+Y   T      H V L+G+   D   D + + N W   WG  GY +I   ++   I
Sbjct:  253 IRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNCIASGCNGGWSGNYFNFFKTPGIAYEKDDPYKAVTGTS----------------CITTSSVAR----FKYTNYGYTEKTKAALLAELKKGPVTIAVYVDSAFQNYKSGIYNSATKYTGINHLVLLVGY---DQATDAYKIKNSWGSWWGESGYMRITASNDNLAI 438          
The following BLAST results are available for this feature:
BLAST of CV885078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CATV_NPVAH7.278e-1627.27Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATS_MOUSE1.241e-1530.18Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
BROM1_ANACO1.241e-1526.73Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP_HEMSP1.621e-1525.54Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CPR2_ARATH3.612e-1526.34Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
ACTN_ACTCH4.717e-1529.30Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATLL_FASHE6.161e-1527.68Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATS_CANFA8.047e-1529.49Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATV_NPVST1.051e-1427.85Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
GMSA_DICDI1.373e-1426.32Gamete and mating-type specific protein A OS=Dicty... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885078 ID=CV885078; Name=CV885078; organism=Citrus sinensis; type=EST; length=868bp
TTTTTTTTTTTTTTTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGAT
AGCTTAGGTTCAACGATACACCCCTATAGCTACACATTTGATATATAAAT
AACAACATGAAGGTATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCAA
ACATATCTGCACTTGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAAA
CCAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAAT
CTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAA
TCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACA
GCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTT
GTAGTGAGCAAAATCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCAT
TCTTGTAAATTTCTGCCATTATGTCCTCTGGATCAGAATTGATTCTATAT
GCACTAATACTGTAGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGAC
GCACTTCCTCACACACTTTGGAGTAGGATATGCCGGCTCACAACCAGGGT
GGGAACAGCCAGTACTATCAAAGTAGGGATCACACTCTTCGGTAACAACA
CCATGGTGGACAAAGTATCGCCATGCAGAAATTGGATAACCCCCGTCACA
ACCATCTCCACACAAAAAGCCACAGCAGGCTAAAAGATCATTAACTGATA
GAGATAGGTTCATGCCAAAATGGATGCAGAAACGATCAGATAGCGCTTCA
ACAGCACCAAAAGCCCAACAAGAACCACAATGGCCCTGATCTAGGATCCT
ACTAATGGTGCTGCATTG
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