CV885078

Overview
NameCV885078
Unique NameCV885078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 58/218 (26.61%), Postives = 84/218 (38.53%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVY--KHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNE----CGI 856
            I+++  QG CG  WAF A  A+     I  G  +SLS                   Y    W    H G+ T++  PY    G             +C    ++        +   +S     S+ E          P+ VS    +DF  Y  G+Y  ++ T      H V L+G+G++D G DYWI  N W   WG DGY  I+R +      CG+
Sbjct:  147 ITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESEGSYNGWQYQSFEW-VLEHGGIATDDDYPYRAKEG-------------RCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDA-KDFHLYTGGIYDGENCTSPYGINHFVLLVGYGSAD-GVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGM 348          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 60/222 (27.03%), Postives = 91/222 (40.99%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPYF--DSTGCSH-PGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMG-GHAVKLIGWG---TSDDGEDYWILANQWNRSWGADGYFKI-KRGSNECGI 856
            ++ + +QG CGSCWAF A  AL  +     G  +SLS                  G   +A++Y   +G + TEE  PY   ++  C++ P C  A  T                          I    + +M  +   GP+ V+    +  F  YKSG+Y           H V ++G+G   T  +   +WI+ N W   WG +GY K+ K  +N CGI
Sbjct:  126 VTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDT----------------------GFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGI 325          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 61/223 (27.35%), Postives = 93/223 (41.70%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPYF--DSTGCSH-PGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMG---GHAVKLIGWGT--SDDGEDYWILANQWNRSWGADGYFKI-KRGSNECGI 856
            ++ + +QG CGSCWAF A  AL  +     G  +SLS                  G   +A+RY   +G + +EE  PY   D+  C++ P C  A  T                          +    + +M  +   GP+ V+    ++ F  YKSG+Y     D       H V ++G+G   +D    +WI+ N W   WG +GY K+ K  +N CGI
Sbjct:  126 VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDT----------------------GFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIY--FDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGI 324          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 57/220 (25.91%), Postives = 86/220 (39.09%), Query Frame = -1
Query:  215 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHG-VVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISA-----YRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEE 856
            ++ + DQG CGSCWAF AV  +  ++ +     +SLS                        W     +G + TE+  PY    G            P+C            NS    + A       I S  + + A + KNGP+ ++      F  YKSGV     G  +  H V L+G+  + +   YW++ N W   WG  GY ++  G N C + E
Sbjct:  138 VTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGY----------VPEC-----------SNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA-SSFMSYKSGVLTACIGKQL-NHGVLLVGYDMTGE-VPYWVIKNSWGGDWGEQGYVRVVMGVNACLLSE 333          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 58/217 (26.73%), Postives = 87/217 (40.09%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPY-FDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMG-GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI-KRGSNECGI 856
            ++ + +QG CGSCWAF A  AL  +     G  +SLS                  G   +A++Y   +G + +EE  PY    T C++   +P Y   K                        I    + +M  +   GP+ V+    +  F  YKSG+Y           H V ++G+G       +WI+ N W   WG  GY K+ K  +N CGI
Sbjct:   13 VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCNY---KPEYSAAK------------------DTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGI 208          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 60/222 (27.03%), Postives = 91/222 (40.99%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPYF--DSTGCSH-PGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMG-GHAVKLIGWG---TSDDGEDYWILANQWNRSWGADGYFKI-KRGSNECGI 856
            ++ + +QG CGSCWAF A  AL  +     G  +SLS                  G   +A++Y   +G + +EE  PY   D+  C++ P C  A  T                          I    + +M  +   GP+ V+    +  F  YKSG+Y           H V ++G+G   T  +   +WI+ N W   WG +GY K+ K  +N CGI
Sbjct:  126 VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDT----------------------GFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGI 325          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 58/221 (26.24%), Postives = 95/221 (42.99%), Query Frame = -1
Query:  215 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAY-RINSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR----GSNECGIEE 856
            ++ I +Q  CGSCWAF AV A+     I  G  +SLS                   +  +A++Y + +G + T++  PY    G     C+P                     +  SI+ + R+  + E  +     + PV V+       F HY SG++    G     H V ++G+GT   G++YWI+ N W ++WG  GY  ++R     +  CGI +
Sbjct:   13 VNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGG--WMNNAFQYIITNGGIDTQQNYPYSAVQG----SCKPY------------------RLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQN-HGVVIVGYGTQS-GKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQ 207          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 58/216 (26.85%), Postives = 86/216 (39.81%), Query Frame = -1
Query:  221 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMG-GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG-SNECGI 856
            ++ + +QG CGSCWAF +  AL  +     G  L+LS                   Y  +A++Y   +G + +E+  PY                   C+     K    R  +   +       + + +   + + GPV VS       F  Y  GVY     D     HAV ++G+GT   G  YWI+ N W  SWG  GY  + R  +N CGI
Sbjct:  127 VTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGGG--YMTTAFQYVQQNGGIDSEDAYPYVGQD-------------ESCMYNATAKAAKCRGYREIPVG------NEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQK-GNKYWIIKNSWGESWGNKGYVLLARNKNNACGI 320          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.855e-11
Identity = 58/219 (26.48%), Postives = 86/219 (39.27%), Query Frame = -1
Query:  212 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNS-KHYSISAYRINSDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVY-KHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG-SNECGIEED 856
            ++ + DQ  CGSCWAF A  AL  +  +     +SLS                  G+  SA+ Y   +G +  E                 +YP     R C    +   NS       +  +    E +   +   GP+ V+    +  F  Y SGVY +         H V  +G+GT +  +DYW++ N W  SWG  GY K+ R   N CGI  +
Sbjct:  118 VTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTES----------------SYPYEAEDRSC----RFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGT-ESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASE 315          
BLAST of CV885078 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.855e-11
Identity = 54/218 (24.77%), Postives = 88/218 (40.37%), Query Frame = -1
Query:  212 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMN---LSLSVNXXXXXXXXXXXXXXXXGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEED 856
            ++ I DQG+CGSC+ FG++ AL  R  I  G +   L LS                  G   + + Y + +G+  E   PY  S        + A+   K   +  + N++   +   S     ++ D   +  ++YK+G        Y D    K+  +          H V  +G+G  D G++ WI+ N W   WG  GY  +    N CG+  D
Sbjct:  106 VTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENGIAKESDYPYTGSDSTCRSDVK-AFAKIKSYNRVARNNEVELKAA-ISQGLVDVSIDASSVQFQLYKSG-------AYTD-TQCKNNYFAL-------NHEVCAVGYGVVD-GKECWIVRNSWGTGWGEKGYINMVIEGNTCGVATD 305          
The following BLAST results are available for this feature:
BLAST of CV885078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
P34_SOYBN4.882e-1226.61P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CATL1_PIG4.882e-1227.03Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_CANFA4.882e-1227.35Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
LMCPB_LEIME6.376e-1225.91Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CATL1_SHEEP6.376e-1226.73Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATL1_BOVIN6.376e-1227.03Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
ERVB_TABDI8.327e-1226.24Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATK_RAT1.088e-1126.85Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CYSP3_HOMAM1.855e-1126.48Digestive cysteine proteinase 3 OS=Homarus america... [more]
CPP1_ENTHI1.855e-1124.77Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885078 ID=CV885078; Name=CV885078; organism=Citrus sinensis; type=EST; length=868bp
TTTTTTTTTTTTTTTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGAT
AGCTTAGGTTCAACGATACACCCCTATAGCTACACATTTGATATATAAAT
AACAACATGAAGGTATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCAA
ACATATCTGCACTTGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAAA
CCAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAAT
CTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAA
TCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACA
GCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTT
GTAGTGAGCAAAATCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCAT
TCTTGTAAATTTCTGCCATTATGTCCTCTGGATCAGAATTGATTCTATAT
GCACTAATACTGTAGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGAC
GCACTTCCTCACACACTTTGGAGTAGGATATGCCGGCTCACAACCAGGGT
GGGAACAGCCAGTACTATCAAAGTAGGGATCACACTCTTCGGTAACAACA
CCATGGTGGACAAAGTATCGCCATGCAGAAATTGGATAACCCCCGTCACA
ACCATCTCCACACAAAAAGCCACAGCAGGCTAAAAGATCATTAACTGATA
GAGATAGGTTCATGCCAAAATGGATGCAGAAACGATCAGATAGCGCTTCA
ACAGCACCAAAAGCCCAACAAGAACCACAATGGCCCTGATCTAGGATCCT
ACTAATGGTGCTGCATTG
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