CV885074

Overview
NameCV885074
Unique NameCV885074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP2H1_CHICK (Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 6.390e-17
Identity = 36/106 (33.96%), Postives = 52/106 (49.06%), Query Frame = -2
Query:  547 KDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVV 864
            +D +   +   E E E+ + FT + ++  T +  LAG+ TTS  L   + ++  HPE+E K+  EID    R+  P   D  Q  PY D VI E  R     PL V
Sbjct:  264 RDFIDAFINKMEQEKEN-SYFTVESLTRTTLDLFLAGTGTTSTTLRYGLLILLKHPEIEEKMHKEIDRVVGRDRSPCMADRSQ-LPYTDAVIHEIQRFIDFLPLNV 367          

HSP 2 Score: 53.9138 bits (128), Expect = 6.390e-17
Identity = 30/97 (30.93%), Postives = 49/97 (50.52%), Query Frame = -1
Query:  245 KEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMEN 535
            K+ ++  Y +PK T ++  L  + +D K FP P+KF P  F  N     +R    ++PF  G R C G+  A  EI L L  + +N+  +   D ++
Sbjct:  373 KDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKFDPGHF-LNANGTFRRSD-YFMPFSAGKRICAGEGLARMEIFLFLTSILQNFSLKPVKDRKD 467          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.199e-17
Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = -1
Query:  233 HEDLSSIPISCRETA---KEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLEL 580
            +E L   PI+ R      K+VEI G  +PKGT V + L V+  + + +PEP++F+PERF    ++    +P  YLPFG GPR C+G +FA+  IKL+L+ + +N+ F    + + PL+L
Sbjct:   72 NETLRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERFSKKNKDGI--NPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSFIPCKETQIPLKL 188          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.199e-17
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = -1
Query:  233 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLEL 547
            R + K+ EI G   PKGT V +    + +DSK +PEPD+F+PERF    +E     P  Y+PFG GPR CIG + A+  +KL+LI L +N+ F    + + PL L
Sbjct:  375 RMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPDEFRPERFSKKNKE--NIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSFYPCKETQIPLRL 477          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: C13A6_CAEEL (Putative cytochrome P450 CYP13A6 OS=Caenorhabditis elegans GN=cyp-13A6 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 8.296e-17
Identity = 33/107 (30.84%), Postives = 57/107 (53.27%), Query Frame = -1
Query:  233 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFDPN-CEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLEL 547
            R+  +E  I G    +G  + +    +  + + + E  + FKPER++   CE  +  H  +Y+PFG GPR CIG + A  E K+ L  + + Y FR + + + P++L
Sbjct:  394 RKCMRETTINGVNFDEGMNIQVDTWTLHHNPRIWGEDVEDFKPERWENGACEHLE--HNGSYIPFGSGPRQCIGMRLAQMEQKILLAQILKEYSFRTTKNTQIPVKL 498          

HSP 2 Score: 51.6026 bits (122), Expect = 8.296e-17
Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = -2
Query:  568 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 801
            T D I A  +  L AG  TT+ +LS   YL+A HPE++ KL  E+D   P   +    D   K  YL+ V+KE +R+Y
Sbjct:  310 TFDEIIAQCFVFLAAGFDTTALSLSYATYLLATHPEIQTKLQEEVDRECPDPEI--FFDHLSKLKYLECVMKETLRLY 385          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP6D1_MUSDO (Cytochrome P450 6d1 OS=Musca domestica GN=CYP6D1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.297e-17
Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = -1
Query:  248 IPISCRETAKEVEIGGYRL--PKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 562
            +P   R+  ++ ++   +L  PK T + ++L  + +D + FP+P+ ++PERF    +E+K   P AY+PFG GPR CI Q+  +   K++L  +  N+  +  P  E
Sbjct:  388 LPFLNRKCTQDFQVPDTKLTIPKETGIIISLLGIHRDPQYFPQPEDYRPERF---ADESKDYDPAAYMPFGEGPRHCIAQRMGVMNSKVALAKILANFNIQPMPRQE 491          

HSP 2 Score: 40.0466 bits (92), Expect = 8.297e-17
Identity = 41/151 (27.15%), Postives = 65/151 (43.05%), Query Frame = -2
Query:  541 RLDEIVFKRMKESKQGS----KDLLSLIVKAR----------------ELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEID------GFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVVEK 915
            RL +IV KR  E ++      KDLL L ++ R                E   E+    + D I++ ++   +AGS TT+   S  +Y +A +PE+  K  +E+D      G  P+  +    +  Q   YLD  + E  R Y   P +  K
Sbjct:  247 RLRDIV-KRTIEFREEKGVVRKDLLQLFIQLRNTGKISDDNDKLWHDVESTAENLKAMSIDMIASNSFLFYIAGSETTAATTSFTIYELAMYPEILKKAQSEVDECLQRHGLKPQGRL--TYEAIQDMKYLDLCVMETTRKYPGLPFLNRK 394          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.300e-17
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = -1
Query:  242 IGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENP 523
            IG + +PK T V + L  +  D   + +PD+F PERF DP         P +YLPFG GPR+CIG+  A QE+ + +  L + + F  S D + P
Sbjct:  380 IGEFAIPKDTHVIINLWALHHDKNEWDQPDRFMPERFLDPTGSHLITPTP-SYLPFGAGPRSCIGEALARQELFIFMALLLQRFDFDVSDDKQLP 473          

HSP 2 Score: 41.9726 bits (97), Expect = 8.300e-17
Identity = 38/128 (29.69%), Postives = 64/128 (50.00%), Query Frame = -2
Query:  547 VFKRMKESKQGSKDLLSL--IVKARELETESKN--------VFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVV 900
            +F++ KE K  S+ L SL  I+   ++  E+ N        VF+  +I     +   AG  TTS  L+ I+  +  +PEV+ K+  EID +      P+  D +     L+  I+E +RI  V+PL++
Sbjct:  245 MFEKCKE-KFNSESLSSLTDILIQAKMNAENNNTGEGQDPSVFSDKHILVTVGDIFGAGIETTSSVLNWILAFLVHNPEVKRKIQKEIDQYVGFSRTPSFND-RTHLLMLEATIREVLRIRPVAPLLI 370          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP6W1_DROME (Probable cytochrome P450 6w1 OS=Drosophila melanogaster GN=Cyp6w1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.079e-16
Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = -1
Query:  269 LPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVF 508
            LP G  ++++   V +D + +P+P+K+ PERF  N       +  AY+PFG+GPR CIG +  + + KL L+H+ RN+ F
Sbjct:  396 LPHGMSIYMSTVAVHRDPQYWPDPEKYDPERF--NSSNRDNLNMDAYMPFGVGPRNCIGMRLGLLQSKLGLVHILRNHRF 473          

HSP 2 Score: 37.7354 bits (86), Expect = 1.079e-16
Identity = 27/116 (23.28%), Postives = 56/116 (48.28%), Query Frame = -2
Query:  568 VFKRMKESKQGSKDLLSLIVKARELETESKNVFTP----DYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEI-DGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 900
            V K  + + +   DL+ +++  +     +    +     DY+ A       AG  T++  ++  +Y +A +  ++++L  EI D FG  + +  + +  Q+ PYL QV+ E +R Y
Sbjct:  254 VLKERERTGEKRNDLIDILLALKREAAANPGKMSKEVDLDYLVAQAAVFQTAGFETSASTMTMTLYELAKNEALQDRLRQEIVDFFGDEDHI--SYERIQEMPYLSQVVNETLRKY 367          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP2E1_MACFA (Cytochrome P450 2E1 (Fragment) OS=Macaca fascicularis GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.082e-16
Identity = 34/113 (30.09%), Postives = 56/113 (49.56%), Query Frame = -1
Query:  218 ETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME----NPLELEFGII 544
            E  ++    GY +PKGT +   L  V   ++ FP+P+KFKPE      E  K ++   + PF  G R C G+  A  E+ L L  + +++  +   D +    +P+ + FG I
Sbjct:  327 EATRDTIFRGYIIPKGTVIVPTLDSVLYHNQEFPDPEKFKPEHLVD--ESGKFKYSDYFKPFSAGKRVCAGEGLARMELFLLLSAILQHFNLKPLVDPKDIDISPVNIGFGCI 437          

HSP 2 Score: 51.2174 bits (121), Expect = 1.082e-16
Identity = 37/125 (29.60%), Postives = 60/125 (48.00%), Query Frame = -2
Query:  556 LDEIVFKRMKESKQG-----SKDLLSLIVKARELETES-KNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSP 912
            + E V +R+KE  Q       +DL   ++   E E  S + ++T D I+    +   AG+ TTS  L   + ++  +PE+E KL  EID       +P   D +Q+ PY+  V+ E  R   + P
Sbjct:  198 IKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKD-RQEMPYMHAVVHEIQRFITLVP 321          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.402e-16
Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = -1
Query:  215 IGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENP-LELEFGIIL 523
            IG Y +PKGT V + L  +  D K +  PD F P RF     +       +YLPFG G R C+G+  A  E+ L    + + +  +  P    P  E +FGI+L
Sbjct:  384 IGDYTIPKGTRVIINLWAIHHDEKEWKNPDAFDPGRFLDEDGKYVCSSSESYLPFGAGTRVCLGEMLARMELFLFTSWILQRFTVQVPPGYPPPDKEGKFGIVL 487          

HSP 2 Score: 47.3654 bits (111), Expect = 1.402e-16
Identity = 37/132 (28.03%), Postives = 65/132 (49.24%), Query Frame = -2
Query:  547 DEIVFKRMKESK-----QGSKDLLSLIVKARELETESKNV------FTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVV 909
            D I+ K+ ++ K       + DL ++++KA+ +  E+ N        T D++     +   AG  T+S A + ++  +  HPEV+ K+  EID     E  P   D +    +L+  I E +RI  VSPL++
Sbjct:  245 DSILQKKFEDHKANYSSDSANDLFNILLKAK-MNAENNNSSVHEAGLTDDHMVMTVADIFGAGVETSSTAFAWMIIYLIHHPEVQKKIQEEIDSNIGFERTPKMSD-KGNMNFLNATIHEILRIQPVSPLLI 374          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.403e-16
Identity = 32/117 (27.35%), Postives = 60/117 (51.28%), Query Frame = -1
Query:  230 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAK-----------QRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELE 547
            R  ++++++GGY +PKGT V +++  +A D + + +P  F PER+  +    +                 ++PFG+GPR C+G   A  E+      ++ N  F+ SP  + P++ E
Sbjct:  358 RIASEDIKVGGYTIPKGTQVMMSVYGMASDERYWKDPHIFNPERWLSSNHSTENGGGGGGVVGNSSQSEVFIPFGVGPRMCVGMGVAKDELYYCASQMFMN--FKWSPVNDKPIDDE 472          

HSP 2 Score: 46.595 bits (109), Expect = 1.403e-16
Identity = 33/123 (26.83%), Postives = 61/123 (49.59%), Query Frame = -2
Query:  541 DEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVVEK 909
            D I   R     +  +DLL LI+   E ++E K  +  D +S    + ++AG  T +  L  ++  ++ H +V+ K+  E+     +  +P AL  ++   YL+  I+E MRI   +PL + +
Sbjct:  238 DAITVHRKTLDHEKPRDLLDLILMEIE-KSEEKQFYDDDSLSKCLTDLIVAGHETVAITLGWMILFLSNHQDVQQKVYDELINVVGKGNLP-ALVHRKDTSYLNACIQETMRIRTAAPLALPR 358          
The following BLAST results are available for this feature:
BLAST of CV885074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
CP2H1_CHICK6.390e-1733.96Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=... [more]
CP3AJ_CAPAE7.199e-1739.50Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP3AE_CAVPO7.199e-1742.86Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]
C13A6_CAEEL8.296e-1730.84Putative cytochrome P450 CYP13A6 OS=Caenorhabditis... [more]
CP6D1_MUSDO8.297e-1731.78Cytochrome P450 6d1 OS=Musca domestica GN=CYP6D1 P... [more]
CP17A_MOUSE8.300e-1738.95Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]
CP6W1_DROME1.079e-1638.75Probable cytochrome P450 6w1 OS=Drosophila melanog... [more]
CP2E1_MACFA1.082e-1630.09Cytochrome P450 2E1 (Fragment) OS=Macaca fascicula... [more]
CP17A_SQUAC1.402e-1634.62Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
C516B_DICDI1.403e-1627.35Probable cytochrome P450 516B1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885074 ID=CV885074; Name=CV885074; organism=Citrus sinensis; type=EST; length=922bp
TTTTTTTGGATACTAGAGAGTTCATTACATGCCAGCAGCCCAGAACAATG
TTCTCATATATAAGTTTGATGTAGATTCATTGCTCTGTGAACGGAATTAT
TTCACAAACGGCTTATTGTACGCAAGATATCGAAGAAGTTAAGAAAAGTC
AAAGGCGATATTAGAGCCTTGAAGTTCGGCTCAGGACACGGAGCTTGACC
CCGTGCTTGAAGTTGAGGATTATGCCGAACTCAAGTTCCAAAGGATTTTC
CATGTCAGGAGAATGTCGAAATACATAATTCCTGTATAAATGTATCAGCG
AGAGCTTTATTTCTTGCATGGCGAATTTCTGCCCAATGCATGCTCGGGGT
CCAATTCCAAACGGTAGGTATGCACAAGGATGCCTCTGCTTCGCTTCTTC
ACAATTTGGATCGAACCTCTCTGGCTTGAACTTGTCTGGTTCTGGGAAGT
TCTTTGAATCTTTTGCCACTACACCTAGTGCTAGCCACACCCATGTCCCC
TTGGGGAGACGGTAACCACCTATCTCCACTTCTTTTGCTGTTTCTCTACA
ACTAATGGGGATACTAGATAAATCCTCATGGCTTCTTTTATCACCTGATC
AAGATAGGGAAATTTCTGTTGAAGATCAAGAGCGGTTGGCACAAGTTCCC
TAGGACCAAACCCATCAATCTCTGCAAGCAGCTTGTTCTCAACTTCTGGA
TGTGCAGCTACTAAGTATACAATCGAAGATAACGCAAAAGATGTGGTTGC
TGATCCAGCAAGCAGGTGCTCGTAAGTTACTGCACTGATGTAGTCAGGAG
TAAAGACATTCTTGGACTCTGTCTCCAATTCCCTTGCCTTCACAATGAGT
GACAACAAGTCCTTGGATCCTTGTTTGCTCTCTTTCATTCTTTTGAATAC
AATTTCATCAAGCCGGCCGCTC
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