EY665356

Overview
NameEY665356
Unique NameEY665356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_MOUSE (60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 7.232e-50
Identity = 103/166 (62.05%), Postives = 117/166 (70.48%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGA        G F K P+ T ARV  G+ +  S+  +      V EA+ R  F+FPG  K
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHIGQ-VIMSIRTKLQNKEHVIEALRRAKFKFPGRQK 164          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_HUMAN (60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4)

HSP 1 Score: 197.978 bits (502), Expect = 7.232e-50
Identity = 103/166 (62.05%), Postives = 117/166 (70.48%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGA        G F K P+ T ARV  G+ +  S+  +      V EA+ R  F+FPG  K
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHIGQ-VIMSIRTKLQNKEHVIEALRRAKFKFPGRQK 164          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_BOVIN (60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4)

HSP 1 Score: 197.978 bits (502), Expect = 7.232e-50
Identity = 103/166 (62.05%), Postives = 117/166 (70.48%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGA        G F K P+ T ARV  G+ +  S+  +      V EA+ R  F+FPG  K
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHIGQ-VIMSIRTKLQNKEHVIEALRRAKFKFPGRQK 164          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10L_MOUSE (60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 7.232e-50
Identity = 103/166 (62.05%), Postives = 117/166 (70.48%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGA        G F K P+ T ARV  G+ +  S+  +      V EA+ R  F+FPG  K
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHIGQ-VIMSIRTKLQNKEHVIEALRRAKFKFPGRQK 164          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10L_BOVIN (60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 7.232e-50
Identity = 103/166 (62.05%), Postives = 117/166 (70.48%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGA        G F K P+ T ARV  G+ +  S+  +      V EA+ R  F+FPG  K
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHIGQ-VIMSIRTKLQNKEHVIEALRRAKFKFPGRQK 164          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10L_MACFA (60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.611e-49
Identity = 102/166 (61.45%), Postives = 117/166 (70.48%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  G+D FH+RVR+HPFHV+RINKMLSCAGA        G F K P+ T ARV  G+ +  S+  +      V EA+ R  F+FPG  K
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHIGQ-VIMSIRTKLQNKEHVIEALRRAKFKFPGRQK 164          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_CAEEL (60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.364e-48
Identity = 100/163 (61.35%), Postives = 116/163 (71.17%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPG 523
            MGRRPARCYR IKNKPYPKSRFCRGVPD KIRI+D+G K+  VD FP CVH++S E+E++SSEALEAARI  NKYM K  GKD FHLRVR HPFHV RINKMLSCAGA        G + K P+   ARV  G+ + FS+  ++       EA  R  F+FPG
Sbjct:    1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGK-PQGLVARVDIGD-ILFSMRIKEGNVKHAIEAFRRAKFKFPG 161          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_MACFA (60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.781e-48
Identity = 102/166 (61.45%), Postives = 116/166 (69.88%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            MGRRPAR YR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGA        G F K P+ T ARV  G+ +  S+  +      V EA+ R  F+FPG  K
Sbjct:    1 MGRRPARRYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHIGQ-VIMSIRTKLQNKEHVIEALRRAKFKFPGRQK 164          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10L_HUMAN (60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 3.968e-48
Identity = 101/166 (60.84%), Postives = 116/166 (69.88%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP   H+VS E E +SSEALEAARI  NKYM K  G+D FH+RVR+HPFHV+RINKMLSCAGA        G F K P+ T ARV  G+ +  S+  +      V EA+ R  F+FPG  K
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHIGQ-VIMSIRTKLQNEEHVIEALRRAKFKFPGRQK 164          
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.183e-48
Identity = 102/166 (61.45%), Postives = 115/166 (69.28%), Query Frame = 2
Query:   35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532
            M RRPARCYR  KNKPYPKSR+ R VPD KIRIYD+G KK  VDEFP CVHLVS E E +SSEALEAARI  NKYM   +G+DAFHLRVRVHPFHVLRINKMLSCAGA        G + K P    ARV  G+ + FSV  +     +V E + R  ++FPG  K
Sbjct:    1 MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGK-PHGLAARVDIGQ-IIFSVRTKDSNKDVVVEGLRRARYKFPGQQK 164          
The following BLAST results are available for this feature:
BLAST of EY665356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RL10_MOUSE7.232e-5062.0560S ribosomal protein L10 OS=Mus musculus GN=Rpl10... [more]
RL10_HUMAN7.232e-5062.0560S ribosomal protein L10 OS=Homo sapiens GN=RPL10... [more]
RL10_BOVIN7.232e-5062.0560S ribosomal protein L10 OS=Bos taurus GN=RPL10 P... [more]
RL10L_MOUSE7.232e-5062.0560S ribosomal protein L10-like OS=Mus musculus GN=... [more]
RL10L_BOVIN7.232e-5062.0560S ribosomal protein L10-like OS=Bos taurus GN=RP... [more]
RL10L_MACFA1.611e-4961.4560S ribosomal protein L10-like OS=Macaca fascicula... [more]
RL10_CAEEL1.364e-4861.3560S ribosomal protein L10 OS=Caenorhabditis elegan... [more]
RL10_MACFA1.781e-4861.4560S ribosomal protein L10 OS=Macaca fascicularis G... [more]
RL10L_HUMAN3.968e-4860.8460S ribosomal protein L10-like OS=Homo sapiens GN=... [more]
RL10_YEAST5.183e-4861.4560S ribosomal protein L10 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665356 ID=EY665356; Name=EY665356; organism=Citrus sinensis; type=EST; length=992bp
GAGAATAGCTGAGACCGACCCACGAACGCTCGCCATGGGAAGAAGACCGG
CAAGGTGTTACCGCCAAATCAAGAACAAACCCTACCCAAAGTCCCGCTTT
TGCCGCGGTGTCCCCGATCCCAAGATCAGAATCTACGATGTCGGGATGAA
GAAGAAAGGCGTCGACGAGTTCCCCTTCTGCGTTCACCTCGTCAGTTGGG
AGAAGGAGAACGTGTCGAGCGAGGCCTTGGAAGCTGCCCGTATCGCTTGC
AACAAGTACATGGCCAAGTACGCTGGCAAGGATGCTTTCCATTTGCGAGT
GAGGGTGCACCCCTTCCATGTTCTGCGCATTAACAAGATGCTTTCGTGTG
CTGGGGCTGGATCGGCTCCAGACTGGAATGAGGGGGGCTTTTTGAAAAGC
CCCAAGGAAACCTGTGCTCGTGTTGCTAACGGGGAGGGCCTTTGCTTTTC
TGTCGGTTGCAGGAAAGTAAAAACCACACTGGTCAAGGAGGCCATCCACC
GGGGCTTATTTCAGTTTCCCGGGACGCACAAAGAATGATGACCACAAGGA
AAGGGGGGAATACCCAAATGCGACGCGAGGAGTTTGGGGAGGGGGGGAAC
AGAAAAGAAAGAGAATGCTCGCAAGAGAGCGGAGAAACAGAACAAACGGA
GAGAGAGGGGAGCCAAAGACATTACGGAGGAACGAGGAAAGAGAATGTGG
AGGGAGAAAAAAGAGAGTACAAGAAAGTGGAAACGGAACAAGGCAAACGA
ACAAGAGAAAGAGAAGGTAAGAACAGACAGTAAGAAAAAAAGAGTAAGAA
AAAGAAGCAAGAAACAAGACACAGCCGAAACAGAGGAAGCGAAAGACAAA
AACAAAAGAAGGGGGAGGACGAGAGAACACAGGAAAAAAAGGAAACACAA
ATAGGACGAGAAATAGACACAACCGAAGGAGGAGAAGAAACAAGAATGTA
AAAGAGAGAAACAGAAGGAGCGAAAAAAAGTGCCAGAAAAGG
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