EY665356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_CHICK (60S ribosomal protein L10 (Fragment) OS=Gallus gallus GN=RPL10 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.969e-47 Identity = 98/160 (61.25%), Postives = 112/160 (70.00%), Query Frame = 2 Query: 53 RCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532 RCYR KNKPYPKSRFCRGVPDPKIRI+D+G KK VDEFP C H+VS E E +SSEALEAARI NKYM K GKD FH+RVR+HPFHV+RINKMLSCAGA G F K P+ T ARV G+ + S+ + V EA+ R F+FPG K Sbjct: 2 RCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK-PQGTVARVHMGQ-VIMSIRTKAQNKEHVVEALRRAKFKFPGRQK 159
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10B_SCHPO (60S ribosomal protein L10-B OS=Schizosaccharomyces pombe GN=rpl10b PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.843e-45 Identity = 96/166 (57.83%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532 M RRPARCYR KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI NKY+ K GKD+FHLRVR HPFHV+RINKMLSCAGA F K P ARV G+ L SV + EA+ R ++FPG + Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGK-PNGLVARVNIGQVL-MSVRTKDSSRATAIEALRRCQYKFPGQQR 164
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10A_SCHPO (60S ribosomal protein L10-A OS=Schizosaccharomyces pombe GN=rpl10a PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.843e-45 Identity = 95/166 (57.23%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532 M RRPARCYR KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI NKY+ K GKD+FHLRVR HPFHV+RINKMLSCAGA F K P ARV G+ + SV + EA+ R ++FPG + Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGK-PNGLVARVNIGQ-ILMSVRTKDSSRATAIEALRRCQYKFPGQQR 164
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_EUGGR (60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 9.148e-45 Identity = 93/163 (57.06%), Postives = 110/163 (67.48%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPG 523 MGRRPA+CYR KNK YPKSR+CRGVP+ KIRIYD GM+K D FP HL+S E+E + SEALEAARI NKYM K AGK+A+H+RVRVHPFHV RINKMLSCAGA G F K P ARV G+ L S+ + +V A+ R ++F G Sbjct: 1 MGRRPAKCYRYCKNKAYPKSRYCRGVPEAKIRIYDCGMRKLNADTFPLTYHLISMEREQIGSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFGK-PNGLAARVRIGQPL-MSIRVKPQHEAVVVAALKRASYKFAG 161
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_ENCCU (60S ribosomal protein L10 OS=Encephalitozoon cuniculi GN=RPL10 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.491e-42 Identity = 92/166 (55.42%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532 MGRRP RCYR + K YPKSRF RGVPD KI+I+D+G +K GV EFP V+ +S E+EN+S+EALEAARI NKYM K+AGKD FHLR+RV+PFHVLRINKMLSCAGA G F K P ARV + + S+ ++ EA+ R +FPG K Sbjct: 1 MGRRPGRCYRYLSKKAYPKSRFNRGVPDSKIQIFDLGRRKAGVLEFPLLVNCISNERENLSAEALEAARICANKYMVKHAGKDNFHLRIRVYPFHVLRINKMLSCAGADRLQTGMRGSFGK-PYGRAARVVFNQPI-LSIRTKESFRDAAVEALRRAKNKFPGHQK 164
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_AERPE (50S ribosomal protein L10e OS=Aeropyrum pernix GN=rpl10e PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.285e-22 Identity = 66/162 (40.74%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M RPARCY PY + + GVP PKI +++G ++ ++++ LV E + ALEAARIA NKY+A G F+ R+RV+P HV+R NKM++ AGA D F K P T ARV G + V RK VKEA+ RG +FP Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIHGVPPPKITRFEMGNREM-MEKWEIKGELVMLEAGQIRHNALEAARIAVNKYLATTIGDKNFYFRIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGK-PVGTAARVYPGT-VVLEVWARKGDEENVKEALRRGASKFP 159
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METKA (50S ribosomal protein L10e OS=Methanopyrus kandleri GN=rpl10e PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.856e-21 Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M RPAR YR+ K Y + + +GVPDPKI+ +D+G +F V LV+ E+ V+ ALEAAR+A N+Y+ K G+ +HL++RV+P HVLR N + + AGA + F K P T ARV G+ + +V KEA+ R +FP Sbjct: 1 MVNRPARIYREWKGPAYTRREYIKGVPDPKIQQFDMG---NPAGDFDVEVSLVARERAQVTHNALEAARVAANRYLTKTVGRQNYHLKIRVYPHHVLRENPLATGAGADRVQEGMRLAFGK-PIGTAARVREGQRV-VTVRIDPENFEHAKEALRRAGMKFP 157
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METJA (50S ribosomal protein L10e OS=Methanocaldococcus jannaschii GN=rpl10e PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.019e-19 Identity = 58/159 (36.48%), Postives = 83/159 (52.20%), Query Frame = 2 Query: 44 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 RP RCYR + PY + + +GVP PK+ + +G EFP V+LV+ + ALEAAR+A NKY+ K G+ + ++RV+P +LR +KM + AGA D F K P T ARV G+ + +V K KEA+ R + P Sbjct: 5 RPNRCYRDVDKPPYTRKEYVKGVPQPKVVHFIMGNLSA---EFPVKVNLVATRPIQIRHNALEAARVAANKYLTKMCGRMGYKFQIRVYPHQILREHKMATGAGADRISDGMRLAFGK-PIGTAARVKEGQAI-LTVWVNPDKFPAAKEALRRAAMKLP 158
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_STAMF (50S ribosomal protein L10e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.963e-19 Identity = 60/162 (37.04%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M RPARCY PY + + GVP PKI +++G ++ + LV E + ALEAAR+ NKY++ G + L++RV+P HVLR NKM++ AGA D F K P T ARV G + V RK KEA+ R + P Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIPGVPQPKIVKFEMGNVH---GDYDYRAELVMIEAGQIRHNALEAARVMANKYLSSTVGDQNYFLKIRVYPHHVLRENKMMAFAGADRLQDGMRQAFGK-PIGTAARVYPGT-IVMEVRVRKEHVEHAKEALRRAASKLP 157
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.602e-19 Identity = 61/163 (37.42%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M RPARCYR+IK PY + + G P +I +D+G F LV+ E+ + +ALEAAR +KY+ KY G ++LR+ V P HVLR N+ML+ AGA + F SP ARV G+ + F V + VKEA+ R + P Sbjct: 1 MPARPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAF-GSPAGRAARVEPGQ-VIFYVEFKPEHLAHVKEALRRAASKLP 161 The following BLAST results are available for this feature:
BLAST of EY665356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665356 ID=EY665356; Name=EY665356; organism=Citrus sinensis; type=EST; length=992bpback to top |