EY665356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_THEGJ (50S ribosomal protein L10e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.091e-13 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKM 340 MG RPA+ R + Y + + RG P PKI I+D+G EF + V L + + + ALEA RI N+Y+ K G+ +H ++RV+PF VLR N M Sbjct: 1 MGLRPAKIDRDVDKPAYTRREYIRGAPGPKITIFDMGNLSA---EFEYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPM 99
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_THESM (50S ribosomal protein L10e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.425e-13 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKM 340 M RPA+ R + Y + + RG P P+I I+D+G +F F V L + E + ALEAAR N+Y++K G+ FH ++RV+PF VLR N M Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPRITIFDMG---NPAGDFEFEVSLHTAEPVQIRQNALEAARTQLNRYLSKNVGRSNFHYKIRVYPFQVLRENPM 99
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_SULAC (50S ribosomal protein L10e OS=Sulfolobus acidocaldarius GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.425e-13 Identity = 53/155 (34.19%), Postives = 77/155 (49.68%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMA-KYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAI 496 M RP RCYR+ Y + + G+P PKI + +G ++ + + L++ EK + ALEAAR+ KY++ K A + F L V +P HV+R NKM++ AGA D F K P T AR+ L V +K KEA+ Sbjct: 1 MPLRPGRCYRKFSGPAYTRREYIPGIPMPKITKFVMGNVN---GDYDYELRLITTEKGQIRHNALEAARVIALKYLSKKLASEQNFALVVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGK-PIGTAARLEKLGELVMYVRVKKEHLEAAKEAL 151
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_THEPD (50S ribosomal protein L10e OS=Thermofilum pendens (strain Hrk 5) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.430e-13 Identity = 55/162 (33.95%), Postives = 73/162 (45.06%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M RP RCYR PY + + + P I +D+G K F + LV + + ALEAAR NKY+ G+ F LRV V P H+LR NKM++ AGA D F +P ARV G+ + V KEA+ R + P Sbjct: 1 MPLRPGRCYRHFGTPPYTRLEYIKSNPPVLIPKFDLGNPK---GNFNTVLKLVVMRPGQIRANALEAARQHANKYLTAKVGEANFFLRVAVFPHHILRENKMMAMAGADRLQDGMRLSF-GTPVGRAARVEAGQ-IVMLVKVDAKNIDHAKEALRRAASKIP 157
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METBF (50S ribosomal protein L10e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.430e-13 Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAI-HRG 505 M R+P YR ++ + + + ++ GVP ++ YD+G K FP + L+ EK + ALEAARI N+++ + GK +++++RV+P VLR NK + AGA F K+ T ARV N F+V K K+A+ H G Sbjct: 1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKAN--TSFPIKLSLLVEEKCQIRHTALEAARITANRHLIEDTGKMGYYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKN-VGTAARV-NPFQKIFTVAVEKQNFVAAKKALWHAG 154
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.430e-13 Identity = 45/156 (28.85%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHR 502 M +PA YR++ Y + + G+P KI +++G + G ++P + L E+ + +LE+AR++ N+ M K G+D + + +R P +LR NK + AGA D F K P T AR+ E + F++ C ++ K+ + R Sbjct: 1 MSDKPASMYRKLSKPSYTRRDYVTGIPGSKIAQHNMGNLQTGPQDYPVQISLRIEEECQIRHGSLESARLSANRTMLKQVGQDNYKMVLRKFPHQILRENKQATGAGADRVSDGMRQAFGK-PVGTAARIQQNERV-FTIYCEVDDASVAKDGLRR 154
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_PYRFU (50S ribosomal protein L10e OS=Pyrococcus furiosus GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.173e-13 Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKM 340 M RPA+ R + Y + + RG P PKI I+D+G +F F V L + E + ALEAAR N+Y+ K G+ +H ++RV+PF VLR N M Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVSLHTAEPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPM 99
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_PYRHO (50S ribosomal protein L10e OS=Pyrococcus horikoshii GN=rpl10e PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.145e-13 Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKM 340 M RPA+ R + Y + + RG P PKI I+D+G +F F V L + E + ALEAAR N+Y+ K G+ +H ++RV+PF VLR N M Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHTAEPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPM 99
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_SULTO (50S ribosomal protein L10e OS=Sulfolobus tokodaii GN=rpl10e PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 7.070e-13 Identity = 53/163 (32.52%), Postives = 73/163 (44.79%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M RP RCYR Y + + GVP PKI + +G D + + LV+ EK + ALEAAR+ K + G D F L V +P HV+R NKM++ AGA D F K P T AR+ + +K + K+A + P Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGVPMPKITKFTMGNVNGNYD---YELRLVALEKGQIRHNALEAARVLALKQLTNKTGSDQNFALIVLKYPHHVIRENKMMAFAGADRLQDGMRLSFGK-PIGTAARIERLGDIIMIAKVKKEHLEIAKKAFEAAASKIP 159
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.070e-13 Identity = 46/156 (29.49%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHR 502 M +PA YR I Y + + G+P KI +++G D++P + L E+ + +LE++R++ N+++ K G+ + + +R P V+R NK + AGA D F K P T AR+ N + + F+ C + ++VKEA R Sbjct: 1 MSDKPASMYRTIDKPSYTRREYITGIPGSKIAQHNMGDLSAEPDDYPVQISLRVEEELQIRHGSLESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGK-PVGTAARL-NKDDIVFTAYCDVEQASVVKEAFRR 154 The following BLAST results are available for this feature:
BLAST of EY665356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665356 ID=EY665356; Name=EY665356; organism=Citrus sinensis; type=EST; length=992bpback to top |