EY665344
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 3.211e-37 Identity = 88/171 (51.46%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 158 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E+LC KRAL+ ++LDP WGVNVQ SGSP+NF+V + + ++G L P GG L+ T+ KK A +IFF++M YK+ T GYI DQL Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG---LDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDT-GYINYDQL 186
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 4.193e-37 Identity = 88/170 (51.76%), Postives = 111/170 (65.29%), Query Frame = 2 Query: 164 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSN---FSV*HCIGKNLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 ++ ++ VDPE+ADI+ E+ RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGGNE ID AE+LC KRALE F LDP +WGVNVQ LSG+P+N +S +G +M L P GG LS QT T K + +F+TM Y++ +T G I D L Sbjct: 35 ISKSVQDVDPEMADILNQERTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIM----GLDLPHGGHLSHGYQTKTTKISYISKYFQTMPYRLNEET-GIIDYDTL 199
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 4.193e-37 Identity = 89/171 (52.05%), Postives = 106/171 (61.99%), Query Frame = 2 Query: 158 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 K L APL DP + I+E EK+RQ + + LI SENFTS +VM A+GS+M NKYSEGYPGARYYGGNE+ID AE LC RALE F LD KWGVNVQ SGSP+N + K + ++G L P GG LS T K A + +F TM Y + K G I D L Sbjct: 12 KLLKAPLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPGARYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPANLQAYQAVMKPHDRLMG---LDLPHGGHLSHGFSTPQKAISAVSTYFSTMPYNVN-KETGIIDYDSL 178
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 5.477e-37 Identity = 88/171 (51.46%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 158 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 K L+ PL+ D E+ II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E LC KRAL+ + LDP WGVNVQ SGSP+NF+V + + ++G L P GG L+ T+ KK A +IFF++M YK+ +T GYI DQL Sbjct: 14 KMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSSLNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG---LDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPET-GYINYDQL 180
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_RABIT (Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus GN=SHMT1 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 7.153e-37 Identity = 88/171 (51.46%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 158 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 + L PL+ D E+ DII+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E+LC KRAL+ + LDP WGVNVQ SGSP+NF+V + + ++G L P GG L+ T+ KK A +IFF++MAYK+ T GYI D+L Sbjct: 20 QMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG---LDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDT-GYIDYDRL 186
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 9.342e-37 Identity = 87/171 (50.88%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 158 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 K L PL+ D E+ +II+ E RQ GLEL SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E+LC KRAL+ ++LDP WGVNVQ SGSP+NF+V + + ++G L P GG L+ T KK A +IFF++M YK+ T GYI DQL Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELFASENFASQAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG---LDLPDGGHLTHGFMTGKKKISATSIFFESMPYKVNPDT-GYINYDQL 186
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.220e-36 Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 2 Query: 167 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYI 649 N + DPEI D++ EK RQ+ GLELI SENFTS +VM+++GS TNKY+EG PGARYYGGNE +D E+LC KRALETF L+P +WGVNVQ SGS +NF+ + K + ++G L P GG L+ QT+ KK A +IFF++M Y++ GY+ Sbjct: 31 NRSVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARYYGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMG---LDLPSGGHLTHGYQTDKKKISATSIFFESMPYQV--NETGYV 188
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 2.718e-36 Identity = 88/171 (51.46%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 158 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E LC KRAL+ + LDP WGVNVQ SGSP+NF+V + + ++G L P GG L+ T+ KK A +IFF++M YK+ T GYI DQL Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIMG---LDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDT-GYINYDQL 186
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 2.301e-35 Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 2 Query: 158 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 K L PL+ D E+ +II+ E RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E LC KRAL+ + LD WGVNVQ SGSP+NF+V + + ++G L P GG L+ T+ KK A +IFF++M YK+ T GYI DQL Sbjct: 20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG---LDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDT-GYINYDQL 186
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYM_NEUCR (Putative serine hydroxymethyltransferase, mitochondrial OS=Neurospora crassa GN=NCU05805 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.491e-34 Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 212 EHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCI--GKNLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KTPGYIK*DQL 664 + EK RQ + + LIPSENFTS +V+ A+GS M NKYSEGYPGARYYGGNE+ID +E LC RALETF LDP +WGVNVQ+LSG+P+N V + + ++G L P GG LS QT TKK + +F+T+ Y+++ KT GYI ++L Sbjct: 67 QKEKQRQKQFINLIPSENFTSQAVLDALGSPMQNKYSEGYPGARYYGGNEFIDASERLCQDRALETFGLDPKEWGVNVQALSGAPANLYVYSALMDTHDRLMG---LDLPHGGHLSHGYQTPTKKISFISKYFETLPYRLDEKT-GYIDYNKL 215 The following BLAST results are available for this feature:
BLAST of EY665344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665344 ID=EY665344; Name=EY665344; organism=Citrus sinensis; type=EST; length=1003bpback to top |