EY665344
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_PROM4 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9211) GN=glyA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.488e-22 Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 164 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV 481 +N+ LE DP IA +I+ E RQ LELI SENFTS +VM+A GSV+TNKY+EG P RYYGG E+ID E L +RA + F+ + W NVQ SG+ +NFSV Sbjct: 4 INSALEDADPNIASLIQEESKRQENHLELIASENFTSKAVMEAQGSVLTNKYAEGLPNKRYYGGCEHIDKIEGLAIERAKQLFKAE---W-ANVQPHSGAQANFSV 105
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_OENOB (Serine hydroxymethyltransferase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21 Identity = 54/97 (55.67%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 185 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNF 475 +DP++A + E+ RQ +EL+ SENF S +V QA GSV+TNKYSEGYPG RYYGGNEYID+AE+L +RA E F + NVQ SGS +NF Sbjct: 6 LDPQLAKAVSGEEERQRHNIELVASENFVSKAVRQAQGSVLTNKYSEGYPGKRYYGGNEYIDIAENLAIERAKELFGVS----YANVQPHSGSSANF 98
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.448e-21 Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 2 Query: 176 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV 481 L++ D E+ D I E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE L +RA + F + VNVQ SGS +N +V Sbjct: 6 LKMQDREVFDAIAGETVRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAEDLARERARKLFGCE----YVNVQPHSGSSANMAV 103
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.448e-21 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 176 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV 481 LE DP +A+ I HE RQ LELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N +V Sbjct: 4 LETFDPAVAEAIRHETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAV 101
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.891e-21 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 176 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV 481 LE DP +A++I HE RQ LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG +D+ E+L RA E F D VNVQ SGS +N +V Sbjct: 4 LETFDPAVAEVIRHETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGAD----HVNVQPHSGSQANMAV 101
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_CLAM3 (Serine hydroxymethyltransferase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=glyA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.891e-21 Identity = 63/144 (43.75%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 158 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKK 583 + NAPL VDPEIA ++E E RQ LE+I SENF +V+Q+ GSV+TNKY+EGYPG RYYGG E++D+AE L RA F + NVQ SG+ +N +V I + ++++G L GG L+ ++ N K Sbjct: 5 QSFNAPLSEVDPEIAAVLEQELGRQRGTLEMIASENFVPRAVLQSQGSVLTNKYAEGYPGRRYYGGCEFVDVAEQLAIDRAKSLFGAE----FANVQPHSGATANAAVLAAIAQPGDMILG---LELAHGGHLTHGMKLNFSGK 141
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.891e-21 Identity = 62/155 (40.00%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 170 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCI---GKNLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKI 625 A L DP IAD+I E+ RQ + + LIPSEN+ S +V++A G+V+TNKYSEGYP RYY G ++ID E++ +RA + F +D NVQ SGSP+N ++ + G +M + PMGG L T+ A I+F+++ Y + Sbjct: 9 AALTATDPTIADLIRAEERRQSEKIRLIPSENYVSKAVLEATGTVLTNKYSEGYPNRRYYEGQQFIDQIETIAIERAKQLFGVD----HANVQPYSGSPANLAIYLALLSPGDTVM----GMALPMGGHL-----THGWPVSATGIWFRSVQYGV 150
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_BIFAA (Serine hydroxymethyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=glyA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21 Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 2 Query: 167 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV*HCIGK--NLMIGSWPLIFPMGGILSPAIQTNTKKKPAGAIFFKTMAYKIE*KT 637 NAP+ DPEIA+I++ E +RQ GLE+I SENF +V+QA GSV+TNKY+EGYPG RYYGG E +D E++ +RA F + NVQ SG+ +N +V + K + ++G L GG L+ ++ N + F+ AY + +T Sbjct: 15 NAPIAEADPEIAEILDAELSRQQNGLEMIASENFVPRAVLQAQGSVLTNKYAEGYPGRRYYGGCEQVDKIETIARERAKSLFGAE----YANVQPHSGAQANAAVYQALVKPGDTVLG---LALDHGGHLTHGMKINFSGR-----FYHAEAYGVNPET 161
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21 Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = 2 Query: 161 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSN 472 +++ L DP+IA+ I +E+ RQ +GLELI SENF S +V+QA GSV TNKY+EGYPG RYYGG EY D+ E+L RA E F + NVQ SGS +N Sbjct: 4 RMSQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAE----HANVQPHSGSSAN 103
BLAST of EY665344 vs. ExPASy Swiss-Prot
Match: GLYA_PELPB (Serine hydroxymethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.226e-21 Identity = 57/102 (55.88%), Postives = 70/102 (68.63%), Query Frame = 2 Query: 176 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCPKRALETFRLDPXKWGVNVQSLSGSPSNFSV 481 L+ D E+ + I E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE+L RA + F D VNVQ SGS +N +V Sbjct: 6 LQKQDSELFEAIAKETGRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMAV 103 The following BLAST results are available for this feature:
BLAST of EY665344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665344 ID=EY665344; Name=EY665344; organism=Citrus sinensis; type=EST; length=1003bpback to top |