CV884961

Overview
NameCV884961
Unique NameCV884961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 6.837e-76
Identity = 130/241 (53.94%), Postives = 173/241 (71.78%), Query Frame = -3
Query:  120 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVA-NRIGFFTTFCGKFGIQPGDNLDCYNQGPYG 839
            +G II+R MFE +L +R D+ C    FYTYDAFI+AA  FP FG +GN+  R+RE+AAFF QT HETTGGW  AP G +AWGYC + +++                 YYGRGPIQLT   NY   G+ALG+DL+NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++ RLPGYG+ TNIINGG ECGKG+++  A +R+G++  +C  F +  GDN+ C +Q PYG
Sbjct:   27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDPP------------YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.166e-75
Identity = 134/242 (55.37%), Postives = 173/242 (71.49%), Query Frame = -3
Query:  132 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 857
            G+   ++G I++ ++F ++L  RND+RC A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG   A G  +A GYC++R+ +             +   +YGRGPIQLT   NY   G+A+G DL+NNPDL+ATD  +SFK+AIWFWMTAQ  KPSCH+VI  +W PSA D +A+R PGYG+ TNIINGGIECGKG N  V +RIGF+  +C    + PGDNLDCY+Q
Sbjct:   13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQ------------MGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQ 241          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.432e-75
Identity = 132/244 (54.10%), Postives = 169/244 (69.26%), Query Frame = -3
Query:  132 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 857
            GT     G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG      G +  GYC++RQ+                 +YYGRGPIQLT   NY R G+ +GV  DL+NNPDL+ATDP++SF++AIWFWMTAQ  KPSCH VII +W PS  D  A+R+PGYG+ TNIINGG+EC  G N+ V +RIGF+  +CG   +  G+NLDC NQ
Sbjct:   21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQ 247          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 4.900e-74
Identity = 134/269 (49.81%), Postives = 170/269 (63.20%), Query Frame = -3
Query:  120 SAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLP----GQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYG 911
            SA  CG G       +G    G  +  I+SR +F+ +L +RND  C A  FYTYDAF+ AA AFP F  +G +    KRE+AAF AQT HETTGGW  AP G YAWGYC+  +    +           P     +YYGRGPIQL++N NY   G+A+G DLL +PDL+A+D  +SF +A WFWMT Q PKPSCH V   +W PSA+D  A R+PGYG+ TNIINGG+ECG G +  VA+RIGF+  +C   G+    NLDCY+Q P+G
Sbjct:   61 SAAGCGGGGPTPPSGSG----GSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.862e-73
Identity = 129/244 (52.87%), Postives = 166/244 (68.03%), Query Frame = -3
Query:  132 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 857
            GT     G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG      G +  GYC+++Q+                 +YYGRGPIQLT   NY R G+ +GV  +L+NNPDL+ATDP++SFK+AIWFWMT Q  KPSCH VII +W PS  D  A+R+PGYG+ TNIING  ECG G N+   +RIGF+  +CG   +  G+NLDC NQ
Sbjct:   21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQ 247          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 7.075e-73
Identity = 133/242 (54.96%), Postives = 167/242 (69.01%), Query Frame = -3
Query:  132 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 857
            GT    +G I++ ++F+ +L  RND RC A  FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG   +P G YA GYC++R+ +             +   YYGRGPIQLT   NY   G+A+  DL+NNPDL+ATD  +SFK+AIWFWMT Q  KPSCH+VI   W PSA D +A+R+PGYG+ TNIINGGIECGKG N+ V +RIG++        + PGDNLDCYNQ
Sbjct:   20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQ------------MGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQ 248          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.207e-72
Identity = 130/240 (54.17%), Postives = 165/240 (68.75%), Query Frame = -3
Query:  120 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYG 839
            +G I++ ++F ++L  RND RC A GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG   A    +  GYC++RQ                  +YYGRGPIQLT   NY + G A+G +L+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D  A+R+PGYG+ TNIINGGIECG G N  V +RIG++  +CG   + PG+NLDCYNQ  +G
Sbjct:   27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 7.823e-72
Identity = 130/236 (55.08%), Postives = 162/236 (68.64%), Query Frame = -3
Query:  132 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 839
            +G I++ ++F ++L  RND RC A GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG   A    +  GYC++RQ                  +YYGRGPIQLT   NY + G A+  DL+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D +A+R PG G+ TNIINGGIECG G N+ V +RIG++  +CG   + PGDNLDCYNQ
Sbjct:   27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQ 247          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.927e-70
Identity = 129/257 (50.19%), Postives = 168/257 (65.37%), Query Frame = -3
Query:  132 CGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQ 899
            C + ++     +G    G  +G +I++ +F  +LP R++ +C ARGFYTYDAFI AA +FPAFG SG    + +RE+AAFF QT HETTGG   +   ++ WGYC+  +++  +              YYGRGPIQLT   NY   G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ  KPSCH+VI+  W PSA D  A R+PGYG+ TNIINGGIECG G N    +RIG++  +C   G   G NLDCYNQ
Sbjct:   14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-----------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQ 256          
BLAST of CV884961 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 2.517e-70
Identity = 132/264 (50.00%), Postives = 159/264 (60.23%), Query Frame = -3
Query:  108 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGW-NSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLM 896
            G G   G    G G   G L  II   MF+D+L YRND +C A GFYTY+AFI AAK FP FGN+G++ MRKREIAAF  QT HET G WP A G +Y WGYC++                                N NY  CG+ L + LL  P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D  A R+PGYG+ TNIINGGIECG+G  N+   NRIGF+ T+C   G   G NLDCY Q P+G  L+
Sbjct:   66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM--------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297          
The following BLAST results are available for this feature:
BLAST of CV884961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI11_ORYSJ6.837e-7653.94Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIB_SOLLC1.166e-7555.37Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIA_SOLCI4.432e-7554.10Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHI12_ORYSJ4.900e-7449.81Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIA_SOLLC1.862e-7352.87Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIT_PETHY7.075e-7354.96Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHIQ_TOBAC1.207e-7254.17Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIP_TOBAC7.823e-7255.08Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHI8_ORYSJ1.927e-7050.19Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_POPTR2.517e-7050.00Acidic endochitinase WIN6.2B OS=Populus trichocarp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011F05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884961 ID=CV884961; Name=CV884961; organism=Citrus sinensis; type=EST; length=919bp
TACATTTAGTTGTCCCCTACAAGTGTGACATCTAAAGTTTTTATTAAGTA
GCTTTTATTAAGCTTATTTTACTAAAACGTTGATCATGATGATCACATAG
ATTGTGCCATCAAATTAGGGCCATAAGGCCCTTGGTTGTAGCAATCAAGA
TTGTCGCCAGGCTGAATCCCAAACTTGCCACAGAAAGTGGTAAAGAACCC
AATACGGTTAGCTACAAAGCTATTCCAACCTTTGCCACATTCAATTCCAC
CGTTGATTATATTTGTGGTTAGACCGTATCCCGGAAGCCGGCTGGCGTTT
ACGTCATTTGCTGATGGTTTCCATTCGTCGATAATGACTTCGTGGCACGA
TGGCTTTGGTGGCTGTGCAGTCATCCAGAACCAGATTGCTGACTTGAATG
ATAGTACTGGATCAGTGGCAAGAAGGTCTGGATTGTTCAACAAGTCCACC
CCCAAGGCTTCTCCGCACCTTAAGTAATTGCAATTCCAAGTGAGTTGAAT
TGGACCTCGGCCATAGTATTGCCCTGGCAAGGGACATGGACAGTAAGGAT
AACAGTAGTCGGACCCATGGCTAACTTGCCTAATATAGCAATATCCCCAA
GCATATTCTCCACCAGGTGCATCGGGCCATCCCCCAGTAGTTTCATGGCC
AGTTTGGGCAAAAAAGGCAGCAATTTCTCTTTTACGCATGGTTTCATTTC
CAGAGTTACCAAAGGCTGGAAAAGCTTTGGCTGCCTCTATAAAAGCATCA
TAAGTGTAGAAGCCTCTGGCATGGCATCGTTCATCATTTCTATACGGAAG
CAAGTCTTCAAACATCTCCCTTGAGATGATCTTGCCCAGTTCACCGCCAT
CCGTCCCGTGGCCAGTATCACGTTCACCGCACACAGCGCCGCTTCCACAA
TTCTGTGCTGAACCTCCTT
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