CV884960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 6.796e-69 Identity = 122/221 (55.20%), Postives = 154/221 (69.68%), Query Frame = 2 Query: 164 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 + +IS+ +FE +L +RND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYCY R Q S G PG+ Y+GRGPIQ+++N NY G A+GV+LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI W PS D R+PG+G+ TNIINGG+EC G N+ + NRIGF+ + Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRY 225
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.514e-68 Identity = 123/227 (54.19%), Postives = 158/227 (69.60%), Query Frame = 2 Query: 146 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 GT G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYC++RQ+ +YYGRGPIQLT NY R G+ +GV DL+NNPDL+ATDP++SF++AIWFWMTAQ KPSCH VII +W PS D A+R+PGYG+ TNIINGG+EC G N+ V +RIGF+ + Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRY 230
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.977e-68 Identity = 124/225 (55.11%), Postives = 161/225 (71.56%), Query Frame = 2 Query: 146 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 G+ ++G I++ ++F ++L RND+RC A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG A G +A GYC++R+ + + +YGRGPIQLT NY G+A+G DL+NNPDL+ATD +SFK+AIWFWMTAQ KPSCH+VI +W PSA D +A+R PGYG+ TNIINGGIECGKG N V +RIGF+ + Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQ------------MGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRY 224
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 3.729e-67 Identity = 124/248 (50.00%), Postives = 157/248 (63.31%), Query Frame = 2 Query: 92 SAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLP----GQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 SA CG G +G G + I+SR +F+ +L +RND C A FYTYDAF+ AA AFP F +G + KRE+AAF AQT HETTGGW AP G YAWGYC+ + + P +YYGRGPIQL++N NY G+A+G DLL +PDL+A+D +SF +A WFWMT Q PKPSCH V +W PSA+D A R+PGYG+ TNIINGG+ECG G + VA+RIGF+ + Sbjct: 61 SAAGCGGGGPTPPSGSG----GSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRY 304
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.361e-67 Identity = 120/227 (52.86%), Postives = 155/227 (68.28%), Query Frame = 2 Query: 146 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 GT G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYC+++Q+ +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Q KPSCH VII +W PS D A+R+PGYG+ TNIING ECG G N+ +RIGF+ + Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRY 230
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.417e-66 Identity = 123/222 (55.41%), Postives = 156/222 (70.27%), Query Frame = 2 Query: 146 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFF 811 GT +G I++ ++F+ +L RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYC++R+ + + YYGRGPIQLT NY G+A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPSCH+VI W PSA D +A+R+PGYG+ TNIINGGIECGKG N+ V +RIG++ Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQ------------MGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYY 228
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.040e-64 Identity = 119/240 (49.58%), Postives = 158/240 (65.83%), Query Frame = 2 Query: 104 CGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 C + ++ +G G +G +I++ +F +LP R++ +C ARGFYTYDAFI AA +FPAFG SG + +RE+AAFF QT HETTGG + ++ WGYC+ +++ + YYGRGPIQLT NY G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA D A R+PGYG+ TNIINGGIECG G N +RIG++ + Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-----------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRY 239
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.466e-63 Identity = 118/219 (53.88%), Postives = 150/219 (68.49%), Query Frame = 2 Query: 164 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 +G I++ ++F ++L RND RC A GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG A + GYC++RQ +YYGRGPIQLT NY + G A+G +L+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D A+R+PGYG+ TNIINGGIECG G N V +RIG++ + Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRY 230
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 7.278e-63 Identity = 118/219 (53.88%), Postives = 149/219 (68.04%), Query Frame = 2 Query: 164 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 +G I++ ++F ++L RND RC A GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG A + GYC++RQ +YYGRGPIQLT NY + G A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D +A+R PG G+ TNIINGGIECG G N+ V +RIG++ + Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRY 230
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 2.118e-62 Identity = 120/239 (50.21%), Postives = 145/239 (60.67%), Query Frame = 2 Query: 107 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGW-NSFVANRIGFFTTF 820 G G G G G G L II MF+D+L YRND +C A GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HET G WP A G +Y WGYC++ N NY CG+ L + LL P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D A R+PGYG+ TNIINGGIECG+G N+ NRIGF+ T+ Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM--------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTY 272 The following BLAST results are available for this feature:
BLAST of CV884960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884960 ID=CV884960; Name=CV884960; organism=Citrus sinensis; type=EST; length=821bpback to top |