CV884959

Overview
NameCV884959
Unique NameCV884959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884959 vs. ExPASy Swiss-Prot
Match: MTHR2_YEAST (Methylenetetrahydrofolate reductase 2 OS=Saccharomyces cerevisiae GN=MET13 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.662e-36
Identity = 85/216 (39.35%), Postives = 122/216 (56.48%), Query Frame = -1
Query:  292 RSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKAN-VNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDS--SRKLLEEVQSSYYLVSLVDNDYINGD 930
            R    K  E W+ P  S+ D+     NY  G L+  PWS++  +  E   I   L ++N    +TINSQP VNG RS+    GWG   GYVYQK YLEF     KL  L+D  K   F+T+ A++ +G+  +N  + +  NAVTWG+FP +EI+QPT+V+  SF  WK+E + I +  W     + D   S + ++ +   Y LV++VDNDYI+ D
Sbjct:  378 RQSANKCLELWSTPT-SINDVAFLVINYLNGNLKCLPWSDIP-INDEINPIKAHLIELNQHSIITINSQPQVNGIRSNDKIHGWGPKDGYVYQKQYLEFMLPKTKLPKLIDTLKNNEFLTYFAIDSQGDLLSNHPDNSKSNAVTWGIFPGREILQPTIVEKISFLAWKEEFYHILN-EWKLNMNKYDKPHSAQFIQSLIDDYCLVNIVDNDYISPD 590          
BLAST of CV884959 vs. ExPASy Swiss-Prot
Match: MTHR1_YEAST (Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae GN=MET12 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 9.043e-34
Identity = 82/216 (37.96%), Postives = 122/216 (56.48%), Query Frame = -1
Query:  292 SRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEK----LTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGD 927
            S+ K L E W +P K++ D+ + F  Y  G   + PWS+L GL  ET +I E+L ++N +G+LT+ SQPA N   S     GWG   G +YQKA++E F   ++    L   +D      F ++ A +  G+++ N++    + VTWGVFP   + Q T+++  SFK W+DEAF IWS  WA L+P    +  LL  V   Y LVS+V +D+   D
Sbjct:  437 SKSKAL-ELWGIP-KTIGDLKDIFIKYLEGSTDAIPWSDL-GLSAETALIQEELIQLNYRGYLTLASQPATNATLSSDKIFGWGPAKGRLYQKAFVEMFIHRQQWETTLKPKLDHYGRRKF-SYYAGDSSGSFETNLDPHSSSVVTWGVFPNSPVKQTTIIEEESFKAWRDEAFSIWS-EWAKLFPRNTPANILLRLVHKDYCLVSIVHHDFKETD 647          
BLAST of CV884959 vs. ExPASy Swiss-Prot
Match: MTHR2_SCHPO (Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe GN=met11 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.543e-33
Identity = 73/201 (36.32%), Postives = 117/201 (58.21%), Query Frame = -1
Query:  298 WAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYIN 900
            W  P+    DI   F+ + +  + + PW + + ++ ETK I + L K+N   + T+ SQPAVNG  S     GWG  GG V+QKA++E F + + L   + K    P +T+ A N +  +  N  +   +AVTWGV+P +EIIQ T++   SFK W  E+F++W   WA+LY +   SRKLLE   +  +LV+++ +D+++
Sbjct:  432 WGYPVDE-SDITSLFQKHIMSDISAIPWID-EPVEVETKTIAKYLLKLNGNSWWTVGSQPAVNGAPSADPVFGWGPKGGRVFQKAFVECFVNGKDLKDFITKWHDNPQVTYYAGNNKSEFLTNAPKDGASAVTWGVYPGREIIQSTIIAEVSFKAWLSESFQVWG-EWANLYSKNTPSRKLLENCINDRWLVTVIHHDFMD 629          
The following BLAST results are available for this feature:
BLAST of CV884959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MTHR2_YEAST9.662e-3639.35Methylenetetrahydrofolate reductase 2 OS=Saccharom... [more]
MTHR1_YEAST9.043e-3437.96Methylenetetrahydrofolate reductase 1 OS=Saccharom... [more]
MTHR2_SCHPO1.543e-3336.32Methylenetetrahydrofolate reductase 2 OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011F04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884959 ID=CV884959; Name=CV884959; organism=Citrus sinensis; type=EST; length=960bp
CGCTCATTTTCGATTGCAACTTCCATTGACAATAATTAGGAGCGATTCAA
TAGAATGAAAGCTGCCAATTTAATTTGCATGGAGCATCAGGGAGGTATCA
AAATCCCTATCATCTTATTAATACAATCAGTAAGCTTGTAATTTTGGATA
AATTTCAATTGAAATTAACTTGAGAGAAGGCAACACTTCAAATGGCTTCA
GTGAGGGTACAAGATGACCATTGATGAAATCAGGTTGTAATTCCATGGAG
TACAGCAGCTTAACCTAGAGATCGGCAAAAACAGTAAAAAGATCCCCATT
GATGTAATCATTATCCACCAAGCTGACCAAATAATAGCTGCTCTGCACCT
CTTCGAGCAATTTTCTTGATGAGTCTCCCTCGGGGTACAATGAAGCCCAT
GATCTTGACCAAATTTCGAATGCCTCATCCTTCCACACCTTGAAGCTGGC
AGGGTCAACAACAGTCGGTTGGATAATCTCCTTGGCTGGGAAGACCCCCC
AAGTTACGGCATTCACATCAGTTTGATTAACATTGGCTTTCCAGTTCCCT
TCTTTGTTGACAGCCATGAAGGTTATGAATGGAAGAGCTTTGCTTTTGTC
AACAAGTGCAGTCAACTTCTCTGGTGAGCAGAAAAACTCTAGATATGCTT
TCTGATAAACATATCCTCCTGGCCCACCCCAACCAACAGAAGATGAATCG
GATCTTTCACCATTGACTGCCGGCTGGCTGTTGATAGTGAGGAAACCTTT
CACATTGATCTTTCCAAGCTGTTCATTTATGATTTTGGTCTCTGGCTGAA
GCCCGTCTAACTCTGACCAAGGACTGCTTCTCAATTTCCCAAGGCAGTAA
TTCTTAAATTTTTCATAGATATCTTCAACACTTTTCAAGGGGACAGCCCA
TTCTTCATGAAGTTTCTTGTCACGTGAACGAGGCCGCATAAACTGATGGT
CAGATAAAGC
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