EY665341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 1.023e-62 Identity = 120/183 (65.57%), Postives = 141/183 (77.05%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVFEXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASS+ISSA VAT R+++ QASMVAPFTGLKSS+ FP TKK N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GCT+ATQV + FDN RQ + ISFIA +P G+ Sbjct: 1 MASSVISSAAVAT--RSNVTQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAW-VRIIGFDNVRQVQCISFIAYKPEGY 180
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.023e-62 Identity = 118/184 (64.13%), Postives = 144/184 (78.26%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVFEXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASS++SSA VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYREH+ SPGYYDGRYWTMWKLPM+GCT+ TQV + FDN RQ + ISFIA +P G+ Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAW-IRIIGFDNVRQVQCISFIAYKPEGY 181
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.336e-62 Identity = 118/183 (64.48%), Postives = 142/183 (77.60%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVFEXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASS++SSA VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL EI YL++SGW+PCLEFE E+G+VYREHH SPGYYDGRYWTMWKLPM+GCT+ATQV + FDN RQ + ISFIA +P G+ Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAW-VRIIGFDNVRQVQCISFIAYKPEGY 180
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 1.746e-62 Identity = 118/183 (64.48%), Postives = 141/183 (77.05%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVFEXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASSMISSAT+AT N +S AQA+MVAPFTGLKS+SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLP L+ L KE++YL+RS WIPCLEFELE+G+V+R++ P YYDGRYWTMWKLPM+GCT++ QV E + FDN RQ + ISFIA +P G+ Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAF-IRIIGFDNVRQVQCISFIAYKPKGY 182
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 2.280e-62 Identity = 123/184 (66.85%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVF-EXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASSMISS V T NRA A VAPFTGLKS + FP T+KTNNDI SIASNGGRVQCM+VWP TG KKFETLSYLP L D L KE+ YL+R GWIPCLEFELE G+VYREHH+SPGYYDGRYWTMWKLPM+GCT+A+QV E F + FDN RQ + ISFIA +PP F Sbjct: 1 MASSMISSPAVTTVNRAG---AGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAF--IRIIGFDNVRQVQCISFIAYKPPSF 178
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.977e-62 Identity = 119/183 (65.03%), Postives = 140/183 (76.50%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVFEXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASS++SSA VAT+ A AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YL+ GW+PCLEFE E G+VYRE+H SP YYDGRYWTMWKLPM+GCT+ATQV + FDN RQ + ISFIA +PPG+ Sbjct: 1 MASSVMSSAAVATSTNA--AQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAW-IRIIGFDNVRQVQCISFIAYKPPGY 180
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.889e-62 Identity = 118/183 (64.48%), Postives = 141/183 (77.05%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVFEXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+VYRE+HKSPGYYDGRYWTMWKLPM+GCT+ATQV + FDN RQ + ISFIA +P G+ Sbjct: 1 MASSIVSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAW-VRIIGFDNVRQVQCISFIAYKPEGY 180
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 3.889e-62 Identity = 121/184 (65.76%), Postives = 139/184 (75.54%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVF-EXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASSM+SSA V T S AQA+MVAPFTGLKSS+AFP T+KTN DITSIASNGGRV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCT++ QV E F + FDN RQ + ISFIA +PP F Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAF--IRIIGFDNTRQVQCISFIAYKPPSF 178
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 3.889e-62 Identity = 118/184 (64.13%), Postives = 144/184 (78.26%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVFEXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASS++SSA AT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E+G+VYRE++ SPGYYDGRYWTMWKLPM+GCT+ATQV + FDN RQ + ISFIA +P GF Sbjct: 1 MASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAW-VRIIGFDNVRQVQCISFIAYKPEGF 181
BLAST of EY665341 vs. ExPASy Swiss-Prot
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.079e-62 Identity = 120/183 (65.57%), Postives = 138/183 (75.41%), Query Frame = 1 Query: 28 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTEATQVFEXXXXXXXXXXTFHSSELSKFDNKRQGEGISFIAAQPPGF 576 MASS+ISSA VAT R ++AQASMVAPF GLKS+ +FP + K N DITSIASNGGRVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YL+ GW+PCLEFE E G+VYRE+H SP YYDGRYWTMWKLPM+GCT+ATQV + FDN RQ + ISFIA +PPGF Sbjct: 1 MASSVISSAAVAT--RTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAW-IRIIGFDNVRQVQCISFIAYKPPGF 180 The following BLAST results are available for this feature:
BLAST of EY665341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665341 ID=EY665341; Name=EY665341; organism=Citrus sinensis; type=EST; length=1029bpback to top |