CV884949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7375_MAIZE (UPF0737 protein 5 OS=Zea mays PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.287e-14 Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = -1 Query: 239 MPCVSTTGNGPNGKTINGFLYRYTK-TEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIP 430 MP VS GP G+ +GFLY+Y K EV IVCVCHG+ +PAEFV HAGG +V PL+HI V P Sbjct: 237 MPMVSYKAEGPGGRKTDGFLYKYRKGEEVRIVCVCHGSFLTPAEFVEHAGGGEVPNPLRHIVVNP 301
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U737_TOBAC (UPF0737 protein mc410 OS=Nicotiana tabacum GN=MC410 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = -1 Query: 233 SLPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHAGGTDVSQ-PLKHITVIPSA 442 S P++P VSTTG GPNG+TI+G YRY+ T++ IVC CHG+ SP +FV HA SQ P ++ PS+ Sbjct: 432 SYPNLPWVSTTGPGPNGRTISGVTYRYSSTQIRIVCACHGSHMSPDDFVRHASVEQTSQEPGTGVSSFPSS 502
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7374_ARATH (UPF0737 protein AFP4 OS=Arabidopsis thaliana GN=AFP4 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.131e-13 Identity = 48/110 (43.64%), Postives = 58/110 (52.73%), Query Frame = -1 Query: 233 PTGSKESKKDVGKPPKPQIQSQNTPS----LPHMPCVSTTGNGPNGKTINGFLYRY--TKTEVSIVCVCHGTSFSPAEFVLHAGGT-------DVS-QPLKHITV-IPSA 517 P K + K K +++ L MPCVST G +GK + GFLY Y K EV IVCVCHG+ SPAEFV H GGT DV PL+HI V +PS+ Sbjct: 208 PVNGKGKNGNTAKKQKNNVENSGMEKARNILEDMPCVSTRDVGADGKRVEGFLYWYGGNKEEVKIVCVCHGSFLSPAEFVRHGGGTVSDDDGGDVMINPLRHIVVKLPSS 317
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7373_MAIZE (UPF0737 protein 3 OS=Zea mays PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.200e-13 Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = -1 Query: 245 TALSNAVDCSPAKPKEEVATELHGASSQNPVSTTENLSPTGSKESKKDVGKPPKPQ--IQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITV 631 TA++ + S + P A A S +S + GS+E + +G+ + + MP V T G NG + GFLY+Y+K EV IVC+CHG+ +P+EFV HAG V PL+HI V Sbjct: 127 TAITEEQNSSSSVPSSGEAISSVTAPSLPALSLVPITATLGSREDQSILGRAGARANGMGDVERRMMQEMPGVFTKGLS-NGSRVEGFLYKYSKGEVRIVCICHGSFLTPSEFVEHAGAGKVDNPLRHIVV 256
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7374_ORYSJ (UPF0737 protein Os05g0558800 OS=Oryza sativa subsp. japonica GN=Os05g0558800 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.058e-12 Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = -1 Query: 287 PQIQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHA 469 P ++ + S P +P VSTTG GPNG+TI+G Y++ + EV IVC CHGT +P EF+ HA Sbjct: 364 PNVKFGGSGSYPDLPWVSTTGTGPNGRTISGVTYKFGRNEVKIVCACHGTHMTPEEFMRHA 424
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7372_MAIZE (UPF0737 protein 2 OS=Zea mays PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.058e-12 Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = -1 Query: 245 TALSNAVDCSPAKPKEEVATELHGASSQNPVSTTENLSPTGSKESKKDVGKPPKPQ--IQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITV 631 TA++ + S + P A A S +S + GS+E + +G+ + + MP V T G NG + GFLY+Y+K EV IVC+CHG+ +P+EFV HAG V PL+HI V Sbjct: 127 TAITEEQNSSSSVPSSGEAISSVTAPSLPLLSLVPITATLGSREDQSILGRAGARANGMGDVERRMMQEMPGVFTKGLS-NGSRVEGFLYKYSKGEVRIVCICHGSFLTPSEFVEHAGAGKVDNPLRHIVV 256
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7371_MAIZE (UPF0737 protein 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.058e-12 Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = -1 Query: 245 TALSNAVDCSPAKPKEEVATELHGASSQNPVSTTENLSPTGSKESKKDVGKPPKPQ--IQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITV 631 TA++ + S + P A A S +S + GS+E + +G+ + + MP V T G NG + GFLY+Y+K EV IVC+CHG+ +P+EFV HAG V PL+HI V Sbjct: 258 TAITEEQNSSSSVPSSGEAISSVTAPSLPLLSLVPITATLGSREDQSILGRAGARANGMGDVERRMMQEMPGVFTKGLS-NGSRVEGFLYKYSKGEVRIVCICHGSFLTPSEFVEHAGAGKVDNPLRHIVV 387
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7377_MAIZE (UPF0737 protein 7 OS=Zea mays PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.356e-12 Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = -1 Query: 266 KPKEEVATELHGASSQNPVSTTENLSPTGSKESKKDVGKPPKPQIQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHAGGTDVSQ 595 KP+E A+ A +++ LS GS + P ++ + S P +P VST G GPNG+TI+G Y++ + EV IVC CHGT SP EF+ HA +Q Sbjct: 356 KPREAGASS--SAHAEDEKKADRGLSLMGSA-----IRPGIAPNVKFGGSGSYPDLPWVSTIGAGPNGRTISGVTYKFGRNEVKIVCACHGTHMSPEEFMRHASADAPAQ 458
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7378_MAIZE (UPF0737 protein 8 OS=Zea mays PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12 Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = -1 Query: 266 PQIQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHAGGTDVSQ 469 P ++ + S P +P VST G GPNG+TI+G Y++ + EV IVC CHGT SP EF+ HA +Q Sbjct: 391 PNVKFGGSGSYPDLPWVSTIGAGPNGRTISGVTYKFGRNEVKIVCACHGTHMSPEEFMRHASADAPAQ 458
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7375_ARATH (UPF0737 protein At4g28910 OS=Arabidopsis thaliana GN=AFPH2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12 Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 269 KEEVATELHGAS---SQNPVSTTENLSPTGSKESKKDVGKPPKPQIQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHAGGTDVS 589 K+ VA E G+S S+ P NL+ S + + ++ + + P++P VSTTG+GP+G+TI+G YRY ++ IVC CHG+ SP EFV HA VS Sbjct: 305 KQPVAEE--GSSEDASERPTGDNSNLNTAFSFDFSA-IKPGMAADVKFGGSGARPNLPWVSTTGSGPHGRTISGVTYRYNANQIKIVCACHGSHMSPEEFVRHASEEYVS 411 The following BLAST results are available for this feature:
BLAST of CV884949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884949 ID=CV884949; Name=CV884949; organism=Citrus sinensis; type=EST; length=907bpback to top |