CV884949

Overview
NameCV884949
Unique NameCV884949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7374_MAIZE (UPF0737 protein 4 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.019e-12
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = -1 
Query:  245 LPHMPCVSTTGNGPNGKTINGFLYRYTKTEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITV 439
            +  MP V T G   NG  + GFLY+Y+K EV IVC+CHG+  +P+EFV HAG   V  PL+HI V
Sbjct:  191 MQEMPGVFTKGLS-NGSRVEGFLYKYSKGEVRIVCICHGSFLTPSEFVEHAGAGKVDNPLRHIVV 254
The following BLAST results are available for this feature:
BLAST of CV884949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
U7374_MAIZE4.019e-1252.31UPF0737 protein 4 OS=Zea mays PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884949 ID=CV884949; Name=CV884949; organism=Citrus sinensis; type=EST; length=907bp
ACTTTAATCCTCTCCGTTGATACAATTAGATGGAGAAACAGGAAAAAGAA
ATGAAAAAAACTTTAGATGAGTCTCTTCCATTCATTTGTTAGGAGGAGCT
CCAGTTAAGTTAAAAAAAAGTACAAATTAAACCGTCGCCATATCTCATAA
GCCTTGCAGAAAAGTGATGACTGGATAAATTGACATGTGAAGGGAATTTC
ATAGCACCACTTTTGCGGCATCATCATCAAATGGCAGATGGAATGACAGT
AATGTGTTTCAGAGGCTGCGATACATCTGTGCCTCCAGCATGCAGCACAA
ACTCAGCCGGTGAGAATGAGGTTCCATGGCAGACACAGACAATGCTGACC
TCCGTTTTCGTATATCTGTACAGAAACCCATTAATGGTTTTCCCATTGGG
ACCATTCCCTGTTGTTGAAACACATGGCATATGAGGAAGGGAAGGTGTAT
TTTGACTCTGAATTTGCGGTTTGGGAGGCTTGCCCACGTCCTTCTTCGAT
TCTTTTGATCCAGTGGGGGACAGATTTTCGGTAGTTGAGACAGGATTCTG
AGAAGAGGCTCCATGAAGTTCTGTTGCAACTTCTTCCTTAGGTTTAGCCG
GGCTGCAGTCCACCGCATTTGATAGAGCCGTTTGCTGCACAAAGTTTGTG
GTACAGTTTGTAGGTGGGCTGCATTGGGCATCCTTAGATGATGTCTTTGG
CTTGCCACTGTTTGAGGGACAATTTGTCATTTCGTCATAAACTTGAGCAG
TCTTCCTGTGTGGGGATGTACTGTGTTCAGATTGGCCCTTCGTATCATCT
GCCTTCGAATTTTGCAATTTCAATTGCTCTGGTGGAGAGTGACTTGAATG
GCTTCTCGTATCACTACTGCCGCCACCTTCATGAGAAGAGCTTCTGTAAT
CCGAAAC
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