CV884938

Overview
NameCV884938
Unique NameCV884938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.967e-43
Identity = 102/259 (39.38%), Postives = 152/259 (58.69%), Query Frame = 2
Query:   44 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTP 814
            +Q++L+ +FYS TCP  L+ I D +     ++    A++IRL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+VI   K A+E ACP  VSC+DI+++A    +   GGP + V LGRRDSRT+  +L    LP P   + ++   F + G   + ++VALSGAH+ G + C+ F GR+   NNTG      +  F   L+K C        ++ F D+ TP+ FDN Y+ NL+   GLL+SD  L+S P
Sbjct:   17 AQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRV-GRNNTG-----YNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDP 268          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.887e-42
Identity = 104/263 (39.54%), Postives = 142/263 (53.99%), Query Frame = 2
Query:   47 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDS-TNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALS-GGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGG---NGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA 820
            + +L  +FY ++CP   + +  ++ K   ++  +   L+R+H+HDCFV GCDAS+LLDS      SEK A P N S  GFE+ID +K  +E+ CP  VSCADILT+AA  +V+     P W V  GR D R +    A ++LP        L+  F    L D +DLVALSGAHT G A C  F  RL +F   G  DP+L+ ++   L+  C       N   +   D T P  FD+ YF +L   KGL  SD  L + P A
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARP-NLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDPSA 303          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.223e-41
Identity = 109/241 (45.23%), Postives = 138/241 (57.26%), Query Frame = 2
Query:   92 VLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFD--TLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQEL 802
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   CP V VSCADIL IAA  SVA  GG +++V LGR D+RTAN + A   LP PFD  T+   K S +N  L    ++VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP +FD  Y+ NL   +G++ SDQ L
Sbjct:   82 VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLR---EMVALAGAHTVGFARCS-------TVCTSGNVNPA------AQLQCNCSATLTDSDLQQLD-TTPTMFDKVYYDNLNSNQGIMFSDQVL 305          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.598e-41
Identity = 100/265 (37.74%), Postives = 137/265 (51.70%), Query Frame = 2
Query:    8 ALLVAFVLEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQEL 802
            AL   F      + AQL   FYS +CP   + +  V+   F SD  I A+ +R+ FHDCFV GCDAS+L+D      SEK   PN  S RG+E+ID  K  +E ACPR VSCADI+T+A   SVAL+GGP ++VP GRRD   +N    + NLPGP   +      F   G+N    +  + G H+ G A C  F+ RL         D  ++ +    LR+ C    +       D  T    DN  +  +R ++G+L+ DQ L
Sbjct:    6 ALFFLFCFLAPSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNA-SVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNP--NDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL--------SDRAMEPSLKSSLRRKCSSPNDPTTF--LDQKTSFTVDNAIYGEIRRQRGILRIDQNL 257          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.559e-41
Identity = 108/255 (42.35%), Postives = 139/255 (54.51%), Query Frame = 2
Query:   44 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQEL 802
            S   LS      +C  V + ++ V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PNNNS RGFEVI   K +V  +CP + VSCADIL IAA  S+A  GG ++ V LGR D+ TAN + A   LP P D L      F +     + ++VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP VFD  Y+ NL   +G++ SDQ L
Sbjct:   67 SDKYLSQQLTQESC--VFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARCS-------TVCTSGNVNPA------AQLQCNCSATLTDSDLQQLD-TTPAVFDKVYYDNLNNNQGIMFSDQVL 304          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 7.929e-41
Identity = 105/239 (43.93%), Postives = 133/239 (55.65%), Query Frame = 2
Query:   92 VLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQEL 802
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   CP + VSCADIL IAA  SVA  GG ++ V LGR D+RTAN   A   LP PFD L      F +     + ++VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP +FD  Y+ NL   +G++ SDQ L
Sbjct:   81 VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLR-EMVALAGAHTVGFARCS-------TVCTSGNVNPA------AQLQCNCSATLTDSDLQQLD-TTPTMFDKVYYDNLNNNQGIMFSDQVL 304          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.766e-40
Identity = 105/269 (39.03%), Postives = 145/269 (53.90%), Query Frame = 2
Query:    5 AALLVAFVLEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGR--LYDFNNTGKPDPTLDATFLQQLRKLCPQG-GNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQEL 802
            ++LL+  +L  S S A+LS +FY+ +CP     + + ++ A SSD  +   L+RL FHDCFV GCD S+L+    T  S+    P N S  GF VI+++K  +E  CP  VSCADIL +AA  +V   GGP   +P GRRD R +  A    N+     T+D++ + F + GL+   DLV LSGAHT G A C  F  R  L    N    D +LD ++ Q L   C         + + D  T   FDN+Y+ NL   KGL Q+D  L
Sbjct:   16 SSLLLLLLL--SSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSAL 277          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.307e-40
Identity = 102/267 (38.20%), Postives = 145/267 (54.31%), Query Frame = 2
Query:   14 LVAFVLEGSPS--QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQEL 802
            L  F+L  SP   QA LS  +Y+ TCP    T+  ++     +        +RL FHDC VDGCDASIL+ ST    SE+ A  N +     F+VI  +K AVE  CP +VSC+DIL  A    +++ GGP   V  GR+DS  ++       L  P  T+D + S F + GL  + ++VAL GAHT G + C+ F  R+++ ++   P   ++  +  +LRKLC    N   ++ F DV TP  FDN Y+ NL+   GLLQSD  +
Sbjct:    6 LCLFILVSSPCLLQANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQ-EMVALVGAHTIGFSHCKEFASRIFNKSDQNGP-VEMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKHGYGLLQSDHAI 270          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.013e-40
Identity = 98/241 (40.66%), Postives = 130/241 (53.94%), Query Frame = 2
Query:   92 VLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFST 811
            V + +++++  A +++ R+GASLIRLHFHDCFVDGCD  ILL+ T     E+ A  N+NS RGF VID  K   +  C    VSCAD+L IAA  +       ++ + LGR+D+RTAN   AN  LP PFD L    + F + G N + ++V L+GAHT G ++C          N       TL  T        CP   N   L   D  +P  FD KYF  L   +GLL SDQEL  +
Sbjct:   72 VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRCAVL---CTSTNLNQNRSATLQCT--------CPASANDTGLVGLD-PSPGTFDKKYFEELVKGQGLLFSDQELMQS 299          
BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.693e-39
Identity = 110/276 (39.86%), Postives = 148/276 (53.62%), Query Frame = 2
Query:    2 AAALLVAFVLEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA-ERSVALSGGP-SWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQG--GNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTP 814
            A  LL A   + SP    L   +Y  TCP     ++  ++KA + +   GA++IR+ FHDCFV+GCDAS+LLD T  +   EK AAPNN S RGFE+ID +K A+E ACP VVSCADI+  AA + S  LS G  S+ +P GR D   +N + + + L  P   L +L SSF   G++ + DLV LSGAHT GR+ C  F     D  +   P           LR  CP     +       DV TP+  D +Y+ N+     L  SD  L ++P
Sbjct:   18 ALLLLAAAACQASPYYP-LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLE-DLVVLSGAHTVGRSHCSSFVSDRLDVPSDINP------ALAAFLRTRCPPNTTTSDDPTVMQDVVTPNAMDIQYYKNVLSHTVLFTSDAALLTSP 285          
The following BLAST results are available for this feature:
BLAST of CV884938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER31_ARATH4.967e-4339.38Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER24_ARATH1.887e-4239.54Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER1_SOLLC1.223e-4145.23Suberization-associated anionic peroxidase 1 OS=So... [more]
PER44_ARATH1.598e-4137.74Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER2_SOLLC3.559e-4142.35Suberization-associated anionic peroxidase 2 OS=So... [more]
PERX_SOLTU7.929e-4143.93Suberization-associated anionic peroxidase OS=Sola... [more]
PER18_ARATH1.766e-4039.03Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER6_ARATH2.307e-4038.20Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PERN_IPOBA3.013e-4040.66Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER2_MAIZE9.693e-3939.86Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884938 ID=CV884938; Name=CV884938; organism=Citrus sinensis; type=EST; length=828bp
CGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGGATCACCATCTCAAG
CTCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTGAAC
ACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGG
TGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTG
ATGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTT
GCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACAT
GAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATA
TTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCA
TGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCT
TGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAAT
CTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTC
TCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAG
ATTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAA
CCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGC
GTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATA
CTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGT
TGTTTTCGACTCCTGGTGCCGATACCGC
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