CV884924

Overview
NameCV884924
Unique NameCV884924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13
Identity = 39/119 (32.77%), Postives = 61/119 (51.26%), Query Frame = -1
Query:  521 IIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVPVARCAPS 877
            +IPK  ++ V  W++ RDP+IW +P EF+PERF  ++   ID     Y  +PFG G R C G+  A+  +  A+  ++Q F F V     +    +  GL  P+    + +   R  PS
Sbjct:  392 VIPKDCIVLVPTWTLHRDPEIWSDPEEFKPERFSKENKESID----PYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSVCDETEIPLEMDNQGLLMPKRPIKLRLEARRNTPS 506          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIW-KNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKV-TSPDG-VVDMSERPGLSSPRAQDLVCVP 880
            Y I  GT + +N WS+ RDP IW  +  EF+PER     +S +D  G   + +PFG+GRR CPG++LAM  +   LA+++  FD+ V   P+G   D++E  GL   R   L+  P
Sbjct:  381 YDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHL---DSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPLIAFP 493          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = -1
Query:  581 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG 880
            Y IP  + + VN W +  +P  WK+P  F+PERF  +  S ++  G  ++ +PFG GRR CPG+ LA+  L   +  M+Q F+         +D SE+ G
Sbjct:  388 YDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEE-SGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGG 486          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 38/116 (32.76%), Postives = 61/116 (52.59%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG---LSSPRAQDLVCVP 880
            Y IP  + + VN W +  +P  W  P EF+PERF  +  S+++  G  ++ +PFG GRR CPG+ LA+  L   +  ++Q F+         +D +E+ G   L   +   +VC P
Sbjct:  389 YDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEE-SKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGGQFSLQILKHSTIVCKP 503          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = -1
Query:  542 YIIPKGTLLFVNLWSMGRDPKIW-KNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVP 880
            Y IP  T++ VN W++ RD   W  NP EF PERF ++    +D +G  ++LLPFG+GRR CP + L +  +    A+++  FD+ +  P G+    + M    GL+  + + LV  P
Sbjct:  381 YDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKG-VDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSL--PKGIKPEDIKMDVMTGLAMHKKEHLVLAP 495          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = -1
Query:  536 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFS-QSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPVA 880
            Y IP  T + VN W++GR    W+   EF PERF S      +D++   +Q L FG+GRR CPG+  A   +   L++++  FD+++  P G+    VDM+E  G++  R + L+ VP A
Sbjct:  420 YTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQL--PAGMKAEDVDMTEVFGITVSRKEKLLLVPQA 537          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13
Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = -1
Query:  545 YIIPKGTLLFVNLWSMGRDPKIW-KNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKV--TSPDGVVDMSERPGLSSPRAQDLVCV 880
            Y IP GT + +N W++GR+   W  +  EF+PER    S   +D RG +++LLPFG GRR CP +S A+      LA+++  FD+K+   S +   D++E  G S  R   L  V
Sbjct:  373 YHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTS---VDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKEDKTDVAESSGFSVHREFPLYAV 484          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13
Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = -1
Query:  542 IPKGTLLFVNLWSMGRDPKIW-KNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDLVCVP 874
            IP GT + VNLW++GR+   W  +  EF+PER      S  D RG  ++L+PFG GRR CPG+S A+      LA+++  FD++  S D   D++E  G    R   L  +P
Sbjct:  373 IPAGTQVIVNLWAVGREAATWGPDANEFRPERHLE---SPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQ--SIDDETDVAESIGSVIRRMHPLYVIP 479          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13
Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = -1
Query:  545 YIIPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCV 880
            Y I +GT + +N W+M R P+ W +  +F PERF    +   D +G  ++ LPFGTGRR CPG   AM  L   +A ++  FD+ +  PDG+    +DM    G ++ R   L  V
Sbjct:  381 YEIVEGTRVLINSWAMARSPEYWDDAEKFIPERF---EDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSL--PDGMQPGDIDMELVVGATARRKNHLQLV 491          
BLAST of CV884924 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.705e-13
Identity = 34/98 (34.69%), Postives = 54/98 (55.10%), Query Frame = -1
Query:  581 IPKGTLLFVNLWSMGRDPKIWKNPLEFQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG 874
            IP  + + VN W +  +P  WK P EF+PERF  +  ++++  G  ++ LPFG GRR CPG+ LA+  L   +  ++Q F+         +D  E+ G
Sbjct:  390 IPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEE-AKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGG 486          
The following BLAST results are available for this feature:
BLAST of CV884924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
CP3AR_ONCMY2.028e-1332.77Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]
C71AI_ARATH2.028e-1339.66Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
TCMO_RUTGR2.648e-1336.00Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_PETCR2.648e-1332.76Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C83B1_ARATH2.648e-1335.59Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71C4_MAIZE3.459e-1336.67Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71AP_ARATH3.459e-1338.26Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH3.459e-1339.29Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ5.900e-1337.07Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
TCMO_HELTU7.705e-1334.69Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884924 ID=CV884924; Name=CV884924; organism=Citrus sinensis; type=EST; length=880bp
TGATATCAATTTTCTTGTAGTGCGAAGGATTTCTTATTCTAATAGTAGTG
ACAAGAAAGGATACATAAATAGATTGAGGCTATGATTCTTAAAAAAAAAG
AATTTTCAAAGAAATTATCGTGCATGATGGGTAACGTATCAATCAAATTA
GGTCCAAAATTGAATTCATCGTTTAGGTGTCCATAATGTCAAACACGTTG
AGGAAAATTTTAGATTTTCCGTTGAAATTTCAACGATCACTAATCGTTGA
TCTTGAAGTCATGCAAAGTATCATAGTCTTTTGAGTTTCAACCTAAGACG
TGGCCATATTGTGGACCATAAGAAATTTTCAAAGATCACCATGTCGCTAC
ATTGTTCAAGTTCTTGAATTTCAACGAAAGATGTAGAATTTTCTTCTACG
TGCGACAGCGACACCTTACTGTCCAACCACTTTGAGTTGAGTTAACCACA
CATTAAACAGAGACACTGACTGAACACTGCTAAAGACACTTTAATTTCAA
CGTACATCCGAATTTACGATACTAGGAGCACAACGTGCAACTGGCACGCA
CACAAGATCCTGTGCTCTTGGAGATGATAATCCTGGGCGTTCAGACATAT
CAACCACACCATCGGGACTCGTTACTTTGAAATCGAAACACTGAATCATA
GATGCTAGAGCTGTCGGCAACTCTTGCATGGCTAAAGAAAGGCCAGGGCA
GCCTCTTCTCCCAGTGCCAAATGGCAGCAATTGGTAATGCAATCCCCTAA
CATCAATCTCACTATTTGACTGTGAGAAGAATCGTTCTGGCTGAAATTCC
AACGGGTTCTTCCAAATTTTGGGGTCCCTACCCATGGACCAAAGGTTCAC
AAACAACAGAGTGCCTTTAGGAATTATGTA
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