CV884923

Overview
NameCV884923
Unique NameCV884923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.333e-39
Identity = 89/214 (41.59%), Postives = 117/214 (54.67%), Query Frame = 3
Query:  114 VWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLH-HGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            VWP        P L    F L S   +S  AP+  WSGR W RT C T A GKFSC T DCG  ++ CNG G   PATL + ++  +G  D   Y VSLVDGFN+PM+V P  G G C    C A++   CP  LQV++    G V++CKS C AFG  + CC    ++P+TC  + +SE F+  CP   +YA+D  +    CS   +  + FC
Sbjct:    3 VWPGTLTGDQKPQLSLTAFELASKASQSVDAPSP-WSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDY--YDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 211          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.397e-35
Identity = 87/236 (36.86%), Postives = 118/236 (50.00%), Query Frame = 3
Query:   42 ILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            I + L + A  + + T+VN CPF VW A  P  G   L RG  +          APA   + RIWARTGC + A G+ SC TGDCG  L+C G G A P TLA+++L    N+L  + +SL+DGFNVPM+  P  G G      C  D+ A CP  L+            C + C  F  DE CC    ++   C  +++S +FK  CP   +Y  D  +    C +    KV+FC
Sbjct:   10 IFVALLAVAGEAAVFTVVNQCPFTVWAASVPVGGGRQLNRGESW-------RITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRA-PNTLAEYALKQ-FNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDG--------VCNNACPVFKKDEYCCVG--SAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFC 226          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.882e-35
Identity = 87/240 (36.25%), Postives = 123/240 (51.25%), Query Frame = 3
Query:   30 ISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            ++AT+ + L           + N C + VW A  P  G   L++G  +  +L        A   S R W RTGCT+ A GK SC TGDCG +L C  + GA PATLA+++     +D   Y VSLVDGFN+P+ + P   +  C    C+AD+ A CP  L+V           C S C  F TD+ CCRN Y     C A+++S+ FK+ CP   +YA D  +    C+S  +  ++FC
Sbjct:   11 LAATLAISLHMQEAGVVKFDIKNQCGYTVWAAGLPGGGKR-LDQGQTWTVNLA-------AGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCT-VSGAVPATLAEYT----QSDQDYYDVSLVDGFNIPLAINPTNAQ--CTAPACKADINAVCPSELKVDG--------GCNSACNVFKTDQYCCRNAY--VDNCPATNYSKIFKNQCPQAYSYAKDDTATF-ACASGTDYSIVFC 224          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.152e-33
Identity = 81/223 (36.32%), Postives = 111/223 (49.78%), Query Frame = 3
Query:   81 ILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            + T+VN CPF VW A  P  G   L RG  +          APA   + RIWARTGC + A G+ SC TGDCG  ++C G G A P TLA+++L    N+L  + +S++DGFNVP +  P  G G      C  D+ A CP  L+            C + C  F  DE CC    ++   C  +++S +FK  CP   +Y  D  +    C +    KV+FC
Sbjct:    2 VFTVVNQCPFTVWAASVPVGGGRQLNRGESW-------RITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRA-PNTLAEYALKQ-FNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDG--------VCNNACPVFKKDEYCCVG--SAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFC 205          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.691e-32
Identity = 87/237 (36.71%), Postives = 118/237 (49.79%), Query Frame = 3
Query:   45 LLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTP-HEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSS-PRELKVIFC 746
            LL   +Y  AS +  + NNCP+ VW A  P  G   LERG  +        F AP      RIW RT C +   G+  C TGDCG  LEC G  G  P TLA+++L+   N L  + +S++DGFN+PM+  P + G G C  + C A++   CP +L+V   PG      C + C  FG  + CC     +   C  +  S FFK  CP   +Y  D P+    C S   + KV+FC
Sbjct:   12 LLAFVTYTNASGVFEVHNNCPYTVWAAATPIGGGRRLERGQSWW-------FWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKG-WGKPPNTLAEYALNQFSN-LDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFC 226          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.336e-31
Identity = 86/237 (36.29%), Postives = 119/237 (50.21%), Query Frame = 3
Query:   45 LLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHE-GKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSS-PRELKVIFC 746
            LL   +Y  AS +  + NNCP+ VW A  P  G   LERG  +        F AP      RIW RT C +   G+  C TGDCG  LEC G  G  P TLA+++L+   N L  + +S++DGFN+PM+  P + G G C  + C A++   CP +L+V   PG      C + C  FG  + CC     +   C  +  S +FK  CP   +Y  D P+    C+S   + KV+FC
Sbjct:   12 LLAFVTYTYASGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWW-------FWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKG-WGKPPNTLAEYALNQFSN-LDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFC 226          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.278e-31
Identity = 87/245 (35.51%), Postives = 120/245 (48.98%), Query Frame = 3
Query:   63 YAKASFILTLV--------------NNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHE-GKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDC-SSPRELKVIFC 746
            Y ++SFI +L+              NNCP+ VW A  P  G   L +G  ++ +       AP      RIW RTGC + A G+ SC TGDCG  L+C G  G  P TLA+++L    N L  + +SLVDGFN+PMT  P +   G C  + C A++   CP+ L+V   PG      C + C  FG  + CC     +   C  +  S+FFK  CP   +Y  D P+    C S     +V+FC
Sbjct:    3 YLRSSFIFSLLAFVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLNKGQTWVIN-------APRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFC 225          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.976e-31
Identity = 77/220 (35.00%), Postives = 106/220 (48.18%), Query Frame = 3
Query:   90 LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            + N C + VW A  P  G   L  G  +       S   PA     R+WARTGC +   G+  C TGDCG  L+C   G A P TLA++ L+ G N+L  + +SLVDGFNVPM  +P    G    + C AD+   CP  L+ +          C + C  F TD+ CC +      +C  + +S FFK  CP   +Y  D P     C+   + +V+FC
Sbjct:    5 ITNRCTYTVWAASVPVGGGVQLNPGQSW-------SVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYG-APPNTLAEYGLN-GFNNLDFFDISLVDGFNVPMDFSP-TSNGCTRGISCTADINGQCPSELKTQG--------GCNNPCTVFKTDQYCCNSG-----SCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFC 201          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.976e-31
Identity = 86/237 (36.29%), Postives = 120/237 (50.63%), Query Frame = 3
Query:   45 LLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTP-HEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDC-SSPRELKVIFC 746
            LL L +Y  A+ I  + NNCP+ VW A  P  G   L+RG  ++ +       AP      R+W RT C + A G+ +C TGDCG  L+C G G   P TLA+++L    + L  + +SLVDGFN+PMT  P +   G C  + C A++   CP+ L+V   PG      C + C  FG  + CC     +   C  + FS+FFK  CP   +Y  D P+    C       +VIFC
Sbjct:   12 LLALVTYTYAATI-EVRNNCPYTVWAASTPIGGGRRLDRGQTWVIN-------APRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWG-KPPNTLAEYALDQ-FSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFC 225          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.657e-31
Identity = 83/245 (33.88%), Postives = 121/245 (49.39%), Query Frame = 3
Query:   27 FISATILLLLSSYAKASFILTLV--NNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTP-HEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDC-SSPRELKVIFC 746
            ++ ++ +  L ++   ++  T+   NNCP+ VW A  P  G   L+RG  ++ +       AP      RIW RT C +   G+ SC TGDCG  L+C G G   P TLA+++L    N L  + +SLVDGFN+PMT  P +   G C  + C A++   CP +L+V   PG      C + C  FG  + CC     +   C  +  S FFK  CP   +Y  D P+    C S     +V+FC
Sbjct:    3 YLRSSFVFFLLAFVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVIN-------APRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWG-KPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFC 225          
The following BLAST results are available for this feature:
BLAST of CV884923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TP1B_MALDO1.333e-3941.59Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
ZEAM_MAIZE3.397e-3536.86Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
PRR3_JUNAS9.882e-3536.25Pathogenesis-related protein OS=Juniperus ashei PE... [more]
IAAT_MAIZE4.152e-3336.32Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
OS35_SOLCO2.691e-3236.71Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC1.336e-3136.29Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
OS81_SOLCO2.278e-3135.51Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
P21_SOYBN2.976e-3135.00Protein P21 OS=Glycine max PE=1 SV=1[more]
OSMO_TOBAC2.976e-3136.29Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS13_SOLCO8.657e-3133.88Osmotin-like protein OSML13 OS=Solanum commersonii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884923 ID=CV884923; Name=CV884923; organism=Citrus sinensis; type=EST; length=913bp
ACGAAATGGCCTCAACTTCGCCCATTTTCATTTCAGCAACTATCCTTCTT
CTCCTCAGCTCCTACGCCAAAGCAAGCTTCATACTGACCCTAGTCAACAA
CTGCCCCTTCCCCGTCTGGCCGGCCATCCAGCCCAACGCCGGCCACCCAG
TCCTCGAACGTGGCGGCTTCTATCTCCATAGCCTCACCCACCGCTCCTTC
CCCGCTCCGGCCCAGCACTGGTCGGGCCGGATCTGGGCCAGAACCGGCTG
CACCTACGCCCACGGCAAATTCTCCTGCGTCACGGGCGACTGCGGCCACC
GCTTGGAATGCAACGGACTCGGCGGGGCGACTCCAGCCACCCTGGCCCAG
TTCAGCCTCCACCACGGCCACAACGACCTCTCCTCCTACGGCGTCTCTCT
AGTCGACGGCTTCAACGTCCCCATGACTGTCACCCCGCACGAGGGCAAGG
GCGTCTGTCCGGTAGTGGGTTGTCGCGCTGACCTGCTAGCCACGTGTCCT
CAGAACCTGCAGGTGAGGTCACCGCCGGGTCACGGCCGCGTGGTGGCATG
TAAGAGTGGGTGTGAGGCGTTTGGTACGGACGAGCTGTGTTGTAGGAACC
ATTACAACAGTCCGCAGACATGCCGGGCTTCGAGCTTTTCGGAGTTCTTC
AAGCACGCTTGTCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCT
CATGCATGACTGCTCCTCGCCACGTGAGCTAAAAGTTATTTTCTGTCACT
AGAGAAGCATGAGAATAATAATAAGCTGGAGCATCAAGCTTCACAGTGCT
TAGGATTGTTGTGTTTGTTTTCGTCAATTAGCAGTATCTTGCTTTTTAAT
TAATCTCGTAACTAAAAAGAGAAATTAAAAATGATCAATGTGAGCTTGTG
TCATGTTGGGTGT
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