CV884909

Overview
NameCV884909
Unique NameCV884909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.016e-20
Identity = 50/125 (40.00%), Postives = 79/125 (63.20%), Query Frame = -2
Query:   47 SHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 421
            S + G+ K++   S +S +     R F+++E+   T NF+   +LG GGFG VY G +D   T+VA+K  +  S QG  EF+ E+E+L ++ HRHLV L+GYC++   + L+Y+YM  G LRE++
Sbjct:  536 SFTTGTVKSDARSSSSSIITKE--RKFTYSEVLKMTKNFER--VLGKGGFGTVYHGNLDD--TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENM 654          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.939e-20
Identity = 46/101 (45.54%), Postives = 70/101 (69.31%), Query Frame = -2
Query:   47 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 349
            R F+++E+   TNNF+   +LG GGFG VY G ++  T +VA+K  +  S QG  EF+ E+E+L ++ H++LV L+GYC+E   + L+Y+YMA G LREH+
Sbjct:  580 RRFTYSEVVTMTNNFER--VLGKGGFGMVYHGTVNN-TEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHM 677          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20
Identity = 46/105 (43.81%), Postives = 72/105 (68.57%), Query Frame = -2
Query:   35 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQ 349
            R FS++++   TNNF    +LG GGFG VY G ++G T +VA+K  +  S QG  +F+ E+E+L ++ H++LV L+GYC+E   + L+Y+YMA G L+EH+  T+
Sbjct:  566 RRFSYSQVVIMTNNFQR--ILGKGGFGMVYHGFVNG-TEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTR 667          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20
Identity = 64/176 (36.36%), Postives = 97/176 (55.11%), Query Frame = -2
Query:   32 FCVFAA------SRCRRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLC------RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 520
            FC+F        ++ RR+ K+ +        L   + G+SHSA +       S   +L  NL       R  +FA++  ATN F    L+G GGFG VY+ ++ DG+   VAIK+   +S QG  EF  E+E + K++HR+LV L+GYC+   E +LVY+YM YG+L + L+  +K
Sbjct:  813 FCIFGLIIVAIETKKRRRKKEAA--------LEAYMDGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSV--VAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKK 978          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20
Identity = 64/176 (36.36%), Postives = 97/176 (55.11%), Query Frame = -2
Query:   32 FCVFAA------SRCRRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLC------RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 520
            FC+F        ++ RR+ K+ +        L   + G+SHSA +       S   +L  NL       R  +FA++  ATN F    L+G GGFG VY+ ++ DG+   VAIK+   +S QG  EF  E+E + K++HR+LV L+GYC+   E +LVY+YM YG+L + L+  +K
Sbjct:  813 FCIFGLIIVAIETKKRRRKKEAA--------LEAYMDGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSV--VAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKK 978          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.146e-19
Identity = 46/101 (45.54%), Postives = 71/101 (70.30%), Query Frame = -2
Query:   47 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 349
            + F++AE+   TNNF +  +LG GGFG VY G ++G T +VA+K  +  S QG  +F+ E+E+L ++ H++LV L+GYCEE  ++ L+Y+YMA G L EH+
Sbjct:  565 KKFTYAEVLTMTNNFQK--ILGKGGFGIVYYGSVNG-TEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHM 662          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.553e-19
Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = -2
Query:   44 SAKTNTTGSYASSLPSN----LCRH-FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 406
            S+KTN        LP +    +  H F+F E+ AAT NF     LG GGFG+VY+G +D     VA+K+ +    QG  EF  E+ MLS L H +LV+LIGYC +  + +LVY++M  G+L +HL+
Sbjct:   48 SSKTNGGSKRELLLPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLH 173          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.335e-19
Identity = 46/100 (46.00%), Postives = 69/100 (69.00%), Query Frame = -2
Query:   50 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREH 349
            + +++AE+ A T  F+   +LG GGFG VY G I+G T +VA+K  +P S QG  EF+TE+E+L ++ H +LVSL+GYC+E   + L+Y YM  G L++H
Sbjct:  558 KRYTYAEVLAMTKKFER--VLGKGGFGMVYHGYING-TEEVAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKH 654          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.355e-19
Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = -2
Query:   44 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 343
            F + ++  AT  F E  ++G GGFG VYRG I  ++ ++A+K+  P S QGV EF  EIE L +LRH++LV+L G+C+   +++L+YDY+  G+L   LY
Sbjct:  351 FRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLY 450          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.688e-19
Identity = 61/143 (42.66%), Postives = 81/143 (56.64%), Query Frame = -2
Query:   44 LPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGAT---TK------VAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 445
            L LS   +S SA + KT         L S   + FSF E+K AT NF    ++G GGFG V+RG +D  T   TK      +A+KR NP   QG  E+ TEI  L +L H +LV LIGYC E+ + +LVY++M  G+L  HL+
Sbjct:   20 LHLSSCKSSSSATAHKTE-----GEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLF 157          
The following BLAST results are available for this feature:
BLAST of CV884909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
Y5189_ARATH3.016e-2040.00Probable LRR receptor-like protein kinase At1g5189... [more]
RLK6_ARATH3.939e-2045.54Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y5182_ARATH8.776e-2043.81Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLPE8.776e-2036.36Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC8.776e-2036.36Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y5181_ARATH1.146e-1945.54Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH2.553e-1942.06Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y1756_ARATH3.335e-1946.00Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH4.355e-1944.00Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y3545_ARATH5.688e-1942.66Probable receptor-like protein kinase At3g55450 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884909 ID=CV884909; Name=CV884909; organism=Citrus sinensis; type=EST; length=572bp
TATCTAAGCCTTTGCTTCATGGCAGAGGGGGCTTTTGAGTTTTGTAAAGA
TGCTCCCTCAGTGTTCCATAAGCCATGTAATCATATACAAGTATCATTTC
ACAGTTCTCTTCACAGTAACCAATCAATGAAACAAGGTGTCGGTGTCGAA
GTTTTGAGAGCATTTCAATCTCAGTCTGGAACTCATGCACACCTTGCTCA
GAGAGTGGGTTCCCACGCTTGATAGCAACTTTAGTTGTTGCACCATCGAT
TTCTCCACGGTACACTTTGCCAAAGCCTCCAACCCCAAGAAGTAGAGCTT
CATCAAAGTTGTTAGTGGCAGCTTTTATCTCAGCAAATGAGAAGTGGCGG
CAAAGATTTGAAGGAAGGGAAGATGCATAACTTCCTGTAGTGTTTGTCTT
GGCTGATCCAGCAGAGTGTGAATTTCCATAGAGTGAAAGAGGAAGCCAAC
CAGATTGCGCATCACTTGAGCTCGGATCCTTCCCTTGTCTGCGGCAACGA
GATGCAGCAAAAACACAAAAGCCAACGACAAGGGCTAGAGCAATTCCTCC
ACCAACACCCCCACCAATTATT
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