CV884909

Overview
NameCV884909
Unique NameCV884909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.688e-19
Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = -2
Query:   23 SSDAQSGWLPLSLYGNSHSA-GSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTK---------VAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPL 469
            SS      +P SL  NS+S+  S  T  T     S P+   + F+F E+K AT NF    LLG GGFG V++G IDG T           VA+K+      QG  E+ TE+  L +L H +LV L+GYC E    +LVY++M  G+L  HL++    PL
Sbjct:   30 SSKTSRSTVPSSLSINSYSSVESLPTPRTEGEILSSPN--LKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPL 186          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.429e-19
Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = -2
Query:   47 NLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 358
            N  R  +++EI   TNNF+   ++G GGFG VY G ++ +  +VA+K  +P S QG  EF+ E+E+L ++ H +LVSL+GYC+E   + L+Y+YMA G L+ HL
Sbjct:  558 NKKRRITYSEILLMTNNFER--VIGEGGFGVVYHGYLNDSE-QVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHL 658          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 9.703e-19
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = -2
Query:   23 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL-YKTQKPPL 343
            FSF+EI+ ATN+FD  L +G GG+G +Y G +    T+VAIK  NP S QG  E+Q E+++LSK+RH ++++LIG C E     LVY+Y+  G+L + L  K   PPL
Sbjct:  469 FSFSEIEEATNHFDSTLKIGEGGYGSIYVGLL--RHTQVAIKMLNPNSSQGPVEYQQEVDVLSKMRHPNIITLIGACPEGWS--LVYEYLPGGSLEDRLTCKDNSPPL 572          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.703e-19
Identity = 63/171 (36.84%), Postives = 87/171 (50.88%), Query Frame = -2
Query:   23 AASRCRRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEID---------GATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPL 508
            +AS   +     S S   SG L  + Y    S G   T  T     S P+   + F+F E+K AT NF +  LLG GGFG V++G ID         G+   VA+K+  P   QG  E+ TE+  L +L H +LV L+GYC E    +LVY++M  G+L  HL++    PL
Sbjct:   22 SASSGSKVSSKTSRSTGPSG-LSTTSYSTDSSFGPLPTLRTEGEILSSPN--LKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPL 189          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.267e-18
Identity = 47/108 (43.52%), Postives = 73/108 (67.59%), Query Frame = -2
Query:   32 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQ--GVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 349
            R F++ E++ A + F E  ++G G F  VY+G +   TT VA+KR    S++    +EF+TE+++LS+L H HL+SL+GYCEE  E +LVY++MA+G+L  HL+   K
Sbjct:  498 RVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTT-VAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNK 604          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.267e-18
Identity = 57/154 (37.01%), Postives = 85/154 (55.19%), Query Frame = -2
Query:   44 RQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHE-----FQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 490
            R G +  S+ + S  L +   G+   +   + + T S   +   +    FSF+E+ +AT NF     +G G FG VYRG+++    +VAIKRG   ++    +     F +EI  LS+L H+HLV L+GYCEE  E +LVYDYM  G L +HL+
Sbjct:  438 RGGSNSRSNSSNSRSLSIRRQGSRMLSMRRQRSGTSSMKHA---DKAEEFSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGR-EVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLH 587          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.655e-18
Identity = 44/99 (44.44%), Postives = 68/99 (68.69%), Query Frame = -2
Query:   47 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 343
            F+F E+   TNNF +A  +G GG+G+VY+G +      +AIKR    S QG  EF+TEIE+LS++ H+++V L+G+C +  E +LVY+Y+  G+LR+ L
Sbjct:  622 FTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQV-IAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGL 719          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.655e-18
Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = -2
Query:   47 NSHSAGSAKTNTTGSYASSLPSNLCR--HFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 424
            N H+  S   +  G  + S  S   +   F+++E++  TNNFD+AL  G GGFG VY G ++    +VA+K  +  S QG   F+ E+E+L ++ H +LVSL+GYC+E   + L+Y+YM  G L++HL
Sbjct:  538 NLHAPPSMPVSNPGHNSQSESSFTSKKIRFTYSEVQEMTNNFDKAL--GEGGFGVVYHGFVN-VIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHL 662          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.162e-18
Identity = 54/139 (38.85%), Postives = 81/139 (58.27%), Query Frame = -2
Query:   32 WLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 448
            WL      N  SA +   +  G     + S     F F+ I+AATN F E+  LG GGFG+VY+G++    T VAIKR +  S QG  EF+ E+++++KL+HR+L  L+GYC +  E ILVY+++   +L   L+  +K
Sbjct:  305 WLLARRRNNKLSAETEDLDEDG-----ITSTETLQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGET-VAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEK 437          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.687e-18
Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = -2
Query:   41 LPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEID---------GATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK 367
            L S   + FSFAE+K+AT NF    +LG GGFG V++G ID         G    +A+K+ N    QG  E+  E+  L +  HRHLV LIGYC E+   +LVY++M  G+L  HL++
Sbjct:   48 LQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFR 165          
The following BLAST results are available for this feature:
BLAST of CV884909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
APK2B_ARATH5.688e-1938.99Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5169_ARATH7.429e-1944.23Probable LRR receptor-like serine/threonine-protei... [more]
PUB33_ARATH9.703e-1947.22U-box domain-containing protein 33 OS=Arabidopsis ... [more]
APK2A_ARATH9.703e-1936.84Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
ACR4_ARATH1.267e-1843.52Serine/threonine-protein kinase-like protein ACR4 ... [more]
ACCR3_ARATH1.267e-1837.01Putative serine/threonine-protein kinase-like prot... [more]
Y5977_ARATH1.655e-1844.44Probable leucine-rich repeat receptor-like protein... [more]
Y2899_ARATH1.655e-1839.06Probable leucine-rich repeat receptor-like protein... [more]
CRK25_ARATH2.162e-1838.85Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
APK1A_ARATH3.687e-1842.37Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884909 ID=CV884909; Name=CV884909; organism=Citrus sinensis; type=EST; length=572bp
TATCTAAGCCTTTGCTTCATGGCAGAGGGGGCTTTTGAGTTTTGTAAAGA
TGCTCCCTCAGTGTTCCATAAGCCATGTAATCATATACAAGTATCATTTC
ACAGTTCTCTTCACAGTAACCAATCAATGAAACAAGGTGTCGGTGTCGAA
GTTTTGAGAGCATTTCAATCTCAGTCTGGAACTCATGCACACCTTGCTCA
GAGAGTGGGTTCCCACGCTTGATAGCAACTTTAGTTGTTGCACCATCGAT
TTCTCCACGGTACACTTTGCCAAAGCCTCCAACCCCAAGAAGTAGAGCTT
CATCAAAGTTGTTAGTGGCAGCTTTTATCTCAGCAAATGAGAAGTGGCGG
CAAAGATTTGAAGGAAGGGAAGATGCATAACTTCCTGTAGTGTTTGTCTT
GGCTGATCCAGCAGAGTGTGAATTTCCATAGAGTGAAAGAGGAAGCCAAC
CAGATTGCGCATCACTTGAGCTCGGATCCTTCCCTTGTCTGCGGCAACGA
GATGCAGCAAAAACACAAAAGCCAACGACAAGGGCTAGAGCAATTCCTCC
ACCAACACCCCCACCAATTATT
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