CV884909

Overview
NameCV884909
Unique NameCV884909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.816e-18
Identity = 56/148 (37.84%), Postives = 83/148 (56.08%), Query Frame = -2
Query:   32 LSLYGNSH-SAGSAKTNTTG----SYASSLPSNLC------RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 439
            L +Y   H ++G    N T         +L  NL       R  +FA++  ATN F    L+G GGFG VY+  + DG+   VAIK+   +S QG  EF  E+E + K++HR+LV L+GYC+   E +LVY++M YG+L + L+  +K
Sbjct:  828 LEMYAEGHGNSGDRTANNTNWKLTGVKEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSA--VAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKK 973          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.289e-18
Identity = 43/101 (42.57%), Postives = 68/101 (67.33%), Query Frame = -2
Query:   47 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 349
            R  ++ E+   TNNF+   +LG GGFG VY G ++   T+VA+K  +  S QG  EF+ E+E+L ++ HR+LV L+GYC++   + L+Y+YMA G L+E++
Sbjct:  554 RRITYPEVLKMTNNFER--VLGKGGFGTVYHGNLED--TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENM 650          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.289e-18
Identity = 43/101 (42.57%), Postives = 70/101 (69.31%), Query Frame = -2
Query:   47 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 349
            + F+++E++A T+NF+   +LG GGFG VY G ++G T  +A+K  +  S QG  EF+ E+E+L ++ H +LVSL+GYC+E   + L+Y+Y   G L++HL
Sbjct:  561 KRFTYSEVEALTDNFER--VLGEGGFGVVYHGILNG-TQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHL 658          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.289e-18
Identity = 57/168 (33.93%), Postives = 86/168 (51.19%), Query Frame = -2
Query:   41 CVFAASRCRRQGKDPSSSDAQSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEID---------GATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK 517
            C+ A  +    G  P    +++        G+  S+ S +TN   +    L S   + F+FAE+KAAT NF    +LG GGFG V++G ID         G    +A+K+ N    QG  E+  E+  L +  H +LV LIGYC E+   +LVY++M  G+L  HL++
Sbjct:    4 CLSAQIKAVSPGASPKYMSSEAN----DSLGSKSSSVSIRTNPR-TEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFR 166          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.214e-18
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = -2
Query:   23 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPL 343
            F+  +IK ATNNFD    +G GGFG VY+G + DG T  +A+K+ +  S+QG  EF TEI M+S L+H +LV L G C E  E++LVY+Y+   +L   L+ T+K  L
Sbjct:  655 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMT--IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRL 760          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.214e-18
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = -2
Query:   23 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPL 343
            F+  +IK ATNNFD    +G GGFG VY+G + DG T  +A+K+ +  S+QG  EF TEI M+S L+H +LV L G C E  E++LVY+Y+   +L   L+ T+K  L
Sbjct:  657 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMT--IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRL 762          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.214e-18
Identity = 42/99 (42.42%), Postives = 69/99 (69.70%), Query Frame = -2
Query:   44 FAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATT-KVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 337
            + ++ AAT+ F E  ++G GGFG V+RG +   ++ ++A+K+  P S QGV EF  EIE L +LRH++LV+L G+C++  +++L+YDY+  G+L   LY
Sbjct:  351 YKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLY 449          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.214e-18
Identity = 55/136 (40.44%), Postives = 78/136 (57.35%), Query Frame = -2
Query:   41 SHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGAT---TK------VAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK 421
            S S  +A   T G   SS P    + F+F E+K AT NF    ++G GGFG V++G +D +T   TK      +A+K+ N    QG  E+ TEI  L +L H +LV LIGYC E+   +LVY++M  G+L  HL++
Sbjct:   32 SSSTVAAAQKTEGEILSSTP---VKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFR 164          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.401e-17
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = -2
Query:   44 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 343
            F+F E+  AT NF     LG GGFGKV++G I+     VAIK+ +    QG+ EF  E+  LS   H +LV LIG+C E  + +LVY+YM  G+L +HL+
Sbjct:   91 FTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLH 190          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.401e-17
Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = -2
Query:   32 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 343
            F F  I+ ATN F E+ ++G GGFG+V+ G ++G  T+VAIKR +  S QG  EF+ E+ +++KL HR+LV L+G+C E  E ILVY+++   +L   L+   K
Sbjct:  325 FDFKAIEDATNKFSESNIIGRGGFGEVFMGVLNG--TEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTK 426          
The following BLAST results are available for this feature:
BLAST of CV884909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
BRI1_ARATH4.816e-1837.84Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y5188_ARATH6.289e-1842.57Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH6.289e-1842.57Probable LRR receptor-like serine/threonine-protei... [more]
APK1B_ARATH6.289e-1833.93Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y5344_ARATH8.214e-1846.30Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH8.214e-1846.30Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH8.214e-1842.42Lectin-domain containing receptor kinase A4.2 OS=A... [more]
BIK1_ARATH8.214e-1840.44Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
RLCK7_ARATH1.401e-1745.00Probable serine/threonine-protein kinase RLCKVII O... [more]
CRK14_ARATH1.401e-1744.23Cysteine-rich receptor-like protein kinase 14 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884909 ID=CV884909; Name=CV884909; organism=Citrus sinensis; type=EST; length=572bp
TATCTAAGCCTTTGCTTCATGGCAGAGGGGGCTTTTGAGTTTTGTAAAGA
TGCTCCCTCAGTGTTCCATAAGCCATGTAATCATATACAAGTATCATTTC
ACAGTTCTCTTCACAGTAACCAATCAATGAAACAAGGTGTCGGTGTCGAA
GTTTTGAGAGCATTTCAATCTCAGTCTGGAACTCATGCACACCTTGCTCA
GAGAGTGGGTTCCCACGCTTGATAGCAACTTTAGTTGTTGCACCATCGAT
TTCTCCACGGTACACTTTGCCAAAGCCTCCAACCCCAAGAAGTAGAGCTT
CATCAAAGTTGTTAGTGGCAGCTTTTATCTCAGCAAATGAGAAGTGGCGG
CAAAGATTTGAAGGAAGGGAAGATGCATAACTTCCTGTAGTGTTTGTCTT
GGCTGATCCAGCAGAGTGTGAATTTCCATAGAGTGAAAGAGGAAGCCAAC
CAGATTGCGCATCACTTGAGCTCGGATCCTTCCCTTGTCTGCGGCAACGA
GATGCAGCAAAAACACAAAAGCCAACGACAAGGGCTAGAGCAATTCCTCC
ACCAACACCCCCACCAATTATT
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