CV884909

Overview
NameCV884909
Unique NameCV884909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.830e-17
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = -2
Query:   47 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 349
            R+F ++E+   TNNF+   ++G GGFGKVY G I+G   +VA+K  +  S QG  EF+ E+++L ++ H +L SL+GYC E   M+L+Y+YMA   L ++L
Sbjct:  562 RYFKYSEVVNITNNFER--VIGKGGFGKVYHGVINGE--QVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYL 658          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.830e-17
Identity = 47/103 (45.63%), Postives = 70/103 (67.96%), Query Frame = -2
Query:   44 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 349
            R   F+++  ATN F  A ++G GGFG+V++  + DG++  VAIK+   LS QG  EF  E+E L K++HR+LV L+GYC+   E +LVY++M YG+L E L+
Sbjct:  824 RKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSS--VAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLH 924          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17
Identity = 43/109 (39.45%), Postives = 73/109 (66.97%), Query Frame = -2
Query:   47 SSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL 373
            SS+ +N  R +++ E+   TNNF+  L  G GGFG VY G ++    +VA+K  +  S QG  +F+ E+++L ++ H +LV+L+GYC+E   ++L+Y+YM+ G L++HL
Sbjct:  572 SSMVANK-RSYTYEEVAVITNNFERPL--GEGGFGVVYHGNVND-NEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL 676          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17
Identity = 45/104 (43.27%), Postives = 70/104 (67.31%), Query Frame = -2
Query:   32 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 343
            FSF  I+AAT+ F ++ ++G GGFG+VYRG++     +VA+KR +  S QG  EF+ E  ++SKL+H++LV L+G+C E  E ILVY+++   +L   L+   K
Sbjct:  333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGP-EVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAK 435          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17
Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = -2
Query:   32 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 349
            R  +FA +  ATN F    ++G GGFG VY+ ++ DG+   VAIK+   ++ QG  EF  E+E + K++HR+LV L+GYC+   E +LVY+YM YG+L   L++  K
Sbjct:  844 RKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSV--VAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTK 948          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.077e-17
Identity = 46/100 (46.00%), Postives = 68/100 (68.00%), Query Frame = -2
Query:   44 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 343
            F F  I+AATNNF ++  LG GGFG+V++G     T +VA+KR + +S QG  EF+ E+ +++KL+HR+LV L+G+  E  E ILVY+YM   +L   L+
Sbjct:  323 FDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGT-EVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLF 421          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.077e-17
Identity = 46/106 (43.40%), Postives = 68/106 (64.15%), Query Frame = -2
Query:   32 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK 349
            +   F  I+ AT NF +   LG GGFG+VY+G +   T +VA+KR +  SEQG  EF+ E+ +++KL+HR+LV L+GYC E  E ILVY+++   +L   L+   K
Sbjct:  353 QQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGT-EVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTK 457          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.324e-17
Identity = 44/106 (41.51%), Postives = 72/106 (67.92%), Query Frame = -2
Query:   44 SNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 361
            + L R F+  EI  AT+NF ++ LLG GGFG+V++G +D  TT VA+KR    +E+ +++   E+++L ++ H++LV L+G C E    +LVY+++  GTL EH+Y
Sbjct:  336 TGLDRIFTGKEIVKATDNFAKSNLLGFGGFGEVFKGNLDDGTT-VAVKRAKLGNEKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIY 440          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.324e-17
Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = -2
Query:   41 AQSGWLPLSLYGNSHSAGSAKTNTT---GSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEID---------GATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK 460
            A S WL         S GS+  + +    +    L +   ++FS +E+K+AT NF    ++G GGFG V++G ID         G    +A+KR N    QG  E+  EI  L +L H +LV LIGYC E    +LVY++M  G+L  HL++
Sbjct:   14 ASSTWLSSKFLSRDGSKGSSTASFSYMPRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFR 165          
BLAST of CV884909 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.324e-17
Identity = 41/102 (40.20%), Postives = 67/102 (65.69%), Query Frame = -2
Query:   44 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 349
            R   + ++  AT+ F +  ++G GGFG V++G++  +   +A+K+  P S QGV EF  EIE L KLRH++LV+L G+C+   +++L+YDY+  G+L   LY
Sbjct:  353 RRLRYRDLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDP-IAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLY 453          
The following BLAST results are available for this feature:
BLAST of CV884909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
SIRK_ARATH1.830e-1743.56Senescence-induced receptor-like serine/threonine-... [more]
BRL2_ARATH1.830e-1745.63Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y4245_ARATH3.121e-1739.45Probable LRR receptor-like serine/threonine-protei... [more]
CRK35_ARATH3.121e-1743.27Putative cysteine-rich receptor-like protein kinas... [more]
BRL3_ARATH3.121e-1742.99Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
CRK16_ARATH4.077e-1746.00Putative cysteine-rich receptor-like protein kinas... [more]
CRK12_ARATH4.077e-1743.40Putative cysteine-rich receptor-like protein kinas... [more]
WAKLP_ARATH5.324e-1741.51Wall-associated receptor kinase-like 15 OS=Arabido... [more]
NAK_ARATH5.324e-1735.53Probable serine/threonine-protein kinase NAK OS=Ar... [more]
LRKA1_ARATH5.324e-1740.20Lectin-domain containing receptor kinase A4.1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884909 ID=CV884909; Name=CV884909; organism=Citrus sinensis; type=EST; length=572bp
TATCTAAGCCTTTGCTTCATGGCAGAGGGGGCTTTTGAGTTTTGTAAAGA
TGCTCCCTCAGTGTTCCATAAGCCATGTAATCATATACAAGTATCATTTC
ACAGTTCTCTTCACAGTAACCAATCAATGAAACAAGGTGTCGGTGTCGAA
GTTTTGAGAGCATTTCAATCTCAGTCTGGAACTCATGCACACCTTGCTCA
GAGAGTGGGTTCCCACGCTTGATAGCAACTTTAGTTGTTGCACCATCGAT
TTCTCCACGGTACACTTTGCCAAAGCCTCCAACCCCAAGAAGTAGAGCTT
CATCAAAGTTGTTAGTGGCAGCTTTTATCTCAGCAAATGAGAAGTGGCGG
CAAAGATTTGAAGGAAGGGAAGATGCATAACTTCCTGTAGTGTTTGTCTT
GGCTGATCCAGCAGAGTGTGAATTTCCATAGAGTGAAAGAGGAAGCCAAC
CAGATTGCGCATCACTTGAGCTCGGATCCTTCCCTTGTCTGCGGCAACGA
GATGCAGCAAAAACACAAAAGCCAACGACAAGGGCTAGAGCAATTCCTCC
ACCAACACCCCCACCAATTATT
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