CV884908

Overview
NameCV884908
Unique NameCV884908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.035e-18
Identity = 55/138 (39.86%), Postives = 80/138 (57.97%), Query Frame = 2
Query:  173 KTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY-KTQKPPLPWKQRLEICIG 583
            KT TT   A  + ++    F F  I+AAT NF     LG GGFG+VY+G     T +VA+KR +  S QG  EF+ E+ +++KL+HR+LV L+GY  +  E ILVY+++   +L   L+   +K  L W +R  I  G
Sbjct:  282 KTKTT-KIADDITTSGSLQFEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGT-EVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIING 417          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.035e-18
Identity = 48/126 (38.10%), Postives = 77/126 (61.11%), Query Frame = 2
Query:  224 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSE--QGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY---KTQKPPLPWKQRLEICIGA 586
            + FS+ E++ AT  F E   +G G F  V++G +   T  VA+KR    S+  +   EF  E+++LS+L H HL++L+GYCE+  E +LVY++MA+G+L +HL+      K  L W +R+ I + A
Sbjct:  491 QEFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTV-VAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQA 615          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.576e-18
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 2
Query:  230 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIG 583
            F+++E+K+AT +FD +  LG GGFG VY+G ++     VA+K  +  S QG  +F  EI  +S + HR+LV L G C E    +LVY+Y+  G+L + L+  +   L W  R EIC+G
Sbjct:  682 FTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRV-VAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLG 798          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.589e-18
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 2
Query:  230 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEI 574
            F + EI+ AT+ F E   LG+G +G VYRG++      VAIKR      + + +   EI++LS + H +LV L+G C E  + +LVY+YM  GTL EHL + +   LPW  RL +
Sbjct:  336 FPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEW-VAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTV 449          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.122e-17
Identity = 53/124 (42.74%), Postives = 73/124 (58.87%), Query Frame = 2
Query:  224 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPL-SEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHL--YKTQKPPLPWKQRLEICIGA 586
            + F++ E++ AT+NF E  +LG GGFGKVY+G +    TKVA+KR     S  G   FQ E+EM+S   HR+L+ LIG+C    E +LVY +M   +L   L   K   P L W+ R  I +GA
Sbjct:  276 KRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPD-NTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGA 398          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.122e-17
Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 2
Query:  143 YGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYC----EENCEMILVYDYMAYGTLREHLY---KTQKPPLPWKQRLEICI 580
            +G +   G       GS     P+     F   E++ ATNNF +   +G GGFG VY+G + DG+   +A+K+      QG  EF+ E+E++S L+HR+LV L G      +   +  LVYDYM+ G L +HL+   +T K PL W QR  I +
Sbjct:  254 FGKAVKGGEVGWEDQGSRPKWRPNTGSIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSV--IAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIIL 405          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.122e-17
Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  230 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK-PPLPWKQRLEICIG 583
            + F  I+AATN F  +  LG GGFG VY+G++   T  VA+KR +  S QG  EF+ E  +++KL+HR+LV L+G+C E  E IL+Y+++   +L   L+  +K   L W +R +I  G
Sbjct:  338 YDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTD-VAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGG 455          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.465e-17
Identity = 49/120 (40.83%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  224 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY-KTQKPPLPWKQRLEICI 580
            R F+++++   TNNF   +++G GGFG VY+G ++    + AIK  +  S QG  EF+TE+E+L ++ H  LVSLIGYC+++  + L+Y+ M  G L+EHL  K     L W  RL+I +
Sbjct:  548 RRFTYSDVNKMTNNFQ--VVIGKGGFGVVYQGCLNNE--QAAIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIAL 663          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.913e-17
Identity = 57/155 (36.77%), Postives = 88/155 (56.77%), Query Frame = 2
Query:  149 NSHSAGSAKTNTTGSYASS-----LPSNLC--RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKT--QKPPLPWKQRLEICIG 583
            +  S G+A  + T SY+ S       S+L   R ++  E++AATN   E  ++G GG+G VYRG + DG  TKVA+K       Q   EF+ E+E++ ++RH++LV L+GYC E    +LVYD++  G L + ++       PL W  R+ I +G
Sbjct:  108 SGESRGTASASETASYSGSGNCGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDG--TKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILG 260          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.499e-17
Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 2
Query:  230 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY---KTQKPPLPWKQRLEICIG 583
            F+  +IKAAT+NFD    +G GGFG VY+GE+      +A+K+ +  S QG  EF  EI M+S L+H +LV L G C E  ++ILVY+Y+    L   L+   ++ +  L W  R +I +G
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKL-IAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLG 785          
The following BLAST results are available for this feature:
BLAST of CV884908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
CRK24_ARATH5.035e-1839.86Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRI4_MAIZE5.035e-1838.10Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y1561_ARATH6.576e-1840.68Probable LRR receptor-like serine/threonine-protei... [more]
WAKLO_ARATH8.589e-1840.87Wall-associated receptor kinase-like 14 OS=Arabido... [more]
Y5129_ARATH1.122e-1742.74Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH1.122e-1736.36Probable receptor-like protein kinase At1g11050 OS... [more]
CRK11_ARATH1.122e-1741.18Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y1755_ARATH1.465e-1740.83Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH1.913e-1736.77Probable serine/threonine-protein kinase At1g01540... [more]
Y1765_ARATH2.499e-1740.50Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884908 ID=CV884908; Name=CV884908; organism=Citrus sinensis; type=EST; length=586bp
CATAATTGGTGGGGGTGTTGGTGGAGGAATTGCTCTAGCCCTTGTCGTTG
GCTTTTGTGTTTTTGCTGCATCTCGTTGCCGCAGACAAGGGAAGGATCCG
AGCTCAAGTGATGCGCAATCTGGTTGGCTTCCTCTTTCACTCTATGGAAA
TTCACACTCTGCTGGATCAGCCAAGACAAACACTACAGGAAGTTATGCAT
CTTCCCTTCCTTCAAATCTTTGCCGCCACTTCTCATTTGCTGAGATAAAA
GCTGCCACTAACAACTTTGATGAAGCTCTACTTCTTGGGGTTGGAGGCTT
TGGCAAAGTGTACCGTGGAGAAATCGATGGTGCAACAACTAAAGTTGCTA
TCAAGCGTGGGAACCCACTCTCTGAGCAAGGTGTGCATGAGTTCCAGACT
GAGATTGAAATGCTCTCAAAACTTCGACACCGACACCTTGTTTCATTGAT
TGGTTACTGTGAAGAGAACTGTGAAATGATACTTGTATATGATTACATGG
CTTATGGAACACTGAGGGAGCATCTTTACAAAACTCAAAAGCCCCCTCTG
CCATGGAAGCAAAGGCTTGAGATATGTATTGGGGCT
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