CV884908

Overview
NameCV884908
Unique NameCV884908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.499e-17
Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 2
Query:  224 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQ----GVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK--TQKPPLPWKQRLEICIGA 586
            + FS  E++ A++ F    +LG GGFGKVY+G + DG  T VA+KR   L E+    G  +FQTE+EM+S   HR+L+ L G+C    E +LVY YMA G++   L +    +PPL W  R  I +G+
Sbjct:  288 KRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADG--TLVAVKR---LKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGS 410          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.499e-17
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 2
Query:  233 SFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY-KTQKPP-LPWKQRLEICIGA 586
            S  +I  +T++F++A ++G GGFG VY+  + DG  TKVAIKR +  + Q   EFQ E+E LS+ +H +LV L+GYC    + +L+Y YM  G+L   L+ K   PP L WK RL I  GA
Sbjct:  732 SLDDILKSTSSFNQANIIGCGGFGLVYKATLPDG--TKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGA 850          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.499e-17
Identity = 49/118 (41.53%), Postives = 74/118 (62.71%), Query Frame = 2
Query:  242 EIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQK---PPLPWKQRLEICIGA 586
            +I  AT++F +  ++G GGFG VY+  + G  T VA+K+ +    QG  EF  E+E L K++H +LVSL+GYC  + E +LVY+YM  G+L +H  + Q      L W +RL+I +GA
Sbjct:  909 DIVEATDHFSKKNIIGDGGFGTVYKACLPGEKT-VAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSL-DHWLRNQTGMLEVLDWSKRLKIAVGA 1024          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.499e-17
Identity = 51/119 (42.86%), Postives = 75/119 (63.03%), Query Frame = 2
Query:  230 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY-KTQKPPLPWKQRLEICIG 583
            F F  I+AATN F E   LG GGFG+VY+G I  +  +VA+KR +  S QG  EF  E+ +++KL+HR+LV L+G+C E  E ILVY+++   +L   ++  T +  L W +R +I  G
Sbjct:  339 FDFKAIEAATNKFCETNKLGQGGFGEVYKG-IFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGG 456          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17
Identity = 47/122 (38.52%), Postives = 76/122 (62.30%), Query Frame = 2
Query:  224 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY-KTQKPPLPWKQRLEICIGA 586
            R F+++E+   TNNF    ++G GGFG V  G I+G+  +VA+K  +  S QG   F+ E+++L ++ H +LVSL+GYC+E   + L+Y+++  G LR+HL  K+    + W  RL I + A
Sbjct:  567 RRFTYSEVIKMTNNFQR--VVGEGGFGVVCHGTINGSE-QVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEA 685          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17
Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 2
Query:  230 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLS--EQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGA 586
            F  +E+K AT+ F E   LG G FG VY+  +      VA+KR N  +        F++E+E+L K+RH ++V+L+GYC E  E +LVY+YM +GTL +HL+      L W  RL+I + A
Sbjct:  507 FRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGI-HVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLH-GDLSQLDWSMRLKIMLQA 625          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  230 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLS--EQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICI 580
            F  +E+K ATN F E   LG G +G VY+  + DG   +VA+KR N  +       EF+TE+E+L  +RH ++V+L+GY  E  E +LVY+YM +GTL +HL+ +   PL W  R++I +
Sbjct:  508 FRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGR--QVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLH-SGFSPLSWSLRIKIAM 624          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.567e-17
Identity = 44/106 (41.51%), Postives = 72/106 (67.92%), Query Frame = 2
Query:  212 SNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLY 529
            + L R F+  EI  AT+NF ++ LLG GGFG+V++G +D  TT VA+KR    +E+ +++   E+++L ++ H++LV L+G C E    +LVY+++  GTL EH+Y
Sbjct:  336 TGLDRIFTGKEIVKATDNFAKSNLLGFGGFGEVFKGNLDDGTT-VAVKRAKLGNEKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIY 440          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.271e-17
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query:  230 FSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQGVHEFQTEIEML---SKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIG 583
            FS AE++ ATN F E  LLG G  G VYR ++ DG   + A+ R  P+S   +HE +   E+L   SKLRH ++V+L+G+C EN E +LVY+Y+ + +L   ++     PL W  RL I IG
Sbjct:  403 FSAAELQLATNCFSEENLLGEGPLGSVYRAKLPDG---QFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMHDEVYKPLSWGLRLRIAIG 521          
BLAST of CV884908 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.271e-17
Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 2
Query:  224 RHFSFAEIKAATNNFDEALLLGVGGFGKVYRGEI-DGATTKVAIKRGNPLSEQ----GVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYK--TQKPPLPWKQRLEICIGA 586
            + FS  E++ AT++F    +LG GGFGKVY+G + DG  T VA+KR   L E+    G  +FQTE+EM+S   HR+L+ L G+C    E +LVY YMA G++   L +    + PL W  R +I +G+
Sbjct:  291 KRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADG--TLVAVKR---LKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGS 413          
The following BLAST results are available for this feature:
BLAST of CV884908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
SERK1_ARATH2.499e-1742.19Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
PSKR1_DAUCA2.499e-1744.63Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
EXS_ARATH2.499e-1741.53Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK4_ARATH2.499e-1742.86Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
PAM74_ARATH3.264e-1738.52Probable LRR receptor-like serine/threonine-protei... [more]
ACCR2_ARATH3.264e-1740.50Serine/threonine-protein kinase-like protein CCR2 ... [more]
ACCR1_ARATH3.264e-1741.67Serine/threonine-protein kinase-like protein CCR1 ... [more]
WAKLP_ARATH5.567e-1741.51Wall-associated receptor kinase-like 15 OS=Arabido... [more]
SRF2_ARATH7.271e-1742.62Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
SERK2_ARATH7.271e-1742.19Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884908 ID=CV884908; Name=CV884908; organism=Citrus sinensis; type=EST; length=586bp
CATAATTGGTGGGGGTGTTGGTGGAGGAATTGCTCTAGCCCTTGTCGTTG
GCTTTTGTGTTTTTGCTGCATCTCGTTGCCGCAGACAAGGGAAGGATCCG
AGCTCAAGTGATGCGCAATCTGGTTGGCTTCCTCTTTCACTCTATGGAAA
TTCACACTCTGCTGGATCAGCCAAGACAAACACTACAGGAAGTTATGCAT
CTTCCCTTCCTTCAAATCTTTGCCGCCACTTCTCATTTGCTGAGATAAAA
GCTGCCACTAACAACTTTGATGAAGCTCTACTTCTTGGGGTTGGAGGCTT
TGGCAAAGTGTACCGTGGAGAAATCGATGGTGCAACAACTAAAGTTGCTA
TCAAGCGTGGGAACCCACTCTCTGAGCAAGGTGTGCATGAGTTCCAGACT
GAGATTGAAATGCTCTCAAAACTTCGACACCGACACCTTGTTTCATTGAT
TGGTTACTGTGAAGAGAACTGTGAAATGATACTTGTATATGATTACATGG
CTTATGGAACACTGAGGGAGCATCTTTACAAAACTCAAAAGCCCCCTCTG
CCATGGAAGCAAAGGCTTGAGATATGTATTGGGGCT
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