CV884903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 48/147 (32.65%), Postives = 79/147 (53.74%), Query Frame = -2 Query: 279 RRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEAE 668 + ++ E + L EP G + ++ Y + V I GP + YEGG FK L P +YP + P RFLTK++HPNI + G +C+ IL ++W+P +RT+LLS+ +LL+ PN P + + + + WK ++ + Sbjct: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGK 157
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 48/147 (32.65%), Postives = 79/147 (53.74%), Query Frame = -2 Query: 279 RRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEAE 668 + ++ E + L EP G + ++ Y + V I GP + YEGG FK L P +YP + P RFLTK++HPNI + G +C+ IL ++W+P +RT+LLS+ +LL+ PN P + + + + WK ++ + Sbjct: 11 KALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGK 157
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17 Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = -2 Query: 261 RRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEAEAVETAK 668 + ++ E + L EP G + +++ Y + V I GP + YEGG FK + P +YP + P RFLTK++HPNI + G +C+ IL ++W+P +RT+LLS+ +LL+ PN P + + + + W+ ++ + E A+ Sbjct: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAE 163
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17 Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = -2 Query: 261 RRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEAEAVETAK 668 + ++ E + L EP G + +++ Y + V I GP + YEGG FK + P +YP + P RFLTK++HPNI + G +C+ IL ++W+P +RT+LLS+ +LL+ PN P + + + + W+ ++ + E A+ Sbjct: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAE 163
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17 Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = -2 Query: 261 RRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEAEAVETAK 668 + ++ E + L EP G + +++ Y + V I GP + YEGG FK + P +YP + P RFLTK++HPNI + G +C+ IL ++W+P +RT+LLS+ +LL+ PN P + + + + W+ ++ + E A+ Sbjct: 11 KALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAE 163
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 47/137 (34.31%), Postives = 76/137 (55.47%), Query Frame = -2 Query: 276 ISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT----------------------KIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEA 617 + P ED + ++ +I GP QSP+E ++KLE+ +P YP+ PK++F+ K+ HPN++ K G ICLDIL+ KWSPA +++ L++I LL+ P P PL+ ++A K ++ A Sbjct: 32 VDLHPLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTA 168
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 51/148 (34.46%), Postives = 79/148 (53.38%), Query Frame = -2 Query: 243 RIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLY 665 R+ +E + + G A PS + N+ +N I G T++ +EGGV+ L + E+YP PK RF +HPN+ G +CL IL ++ W P++ I+TVLL IQ LL PNP P + + TN+ E + K +++Y Sbjct: 8 RLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVY 155
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 45/121 (37.19%), Postives = 65/121 (53.72%), Query Frame = -2 Query: 240 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVL-LSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 596 D M F V GP S Y+GGV+K+ + L E YP +P + F KIYHPN+D++ G +CLD++ WSP + + + + LL PNP DPL+ A ++ KE+ YA Sbjct: 27 DGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYA 147
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = -2 Query: 306 PTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA 560 P + Y+GG FK + + + YP PKV+ L KIYHPNID G +CL+IL+ W+P L + ++L+ +Q L +PN +DPL++ A Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAA 144
BLAST of CV884903 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16 Identity = 46/135 (34.07%), Postives = 76/135 (56.30%), Query Frame = -2 Query: 303 SILEMANSNLPR--RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAK 701 S+ NS P R+ K+ + L P ++ +++ +I+ P + Y+GG F+ E YP+ PKV KI+HPNID G+ICL+IL++ WSPAL ++ ++L + +L PN +DPL++ A+ Sbjct: 22 SVKANTNSTSPAKLRLQKDIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAE 156 The following BLAST results are available for this feature:
BLAST of CV884903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884903 ID=CV884903; Name=CV884903; organism=Citrus sinensis; type=EST; length=735bpback to top |