CV884902

Overview
NameCV884902
Unique NameCV884902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 51/146 (34.93%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   65 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 502
            R++++E Q + + P  GI    +E ++     +I GP  +PY  G+F+++L L +++P+  PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L+E   K       +  + A+  T ++A  A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 51/146 (34.93%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   65 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 502
            R++++E Q + + P  GI    +E ++     +I GP  +PY  G+F+++L L +++P+  PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L+E   K       +  + A+  T ++A  A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 51/146 (34.93%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   65 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 502
            R++++E Q + + P  GI    +E ++     +I GP  +PY  G+F+++L L +++P+  PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L+E   K       +  + A+  T ++A  A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 53/147 (36.05%), Postives = 88/147 (59.86%), Query Frame = 2
Query:   41 EMANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 439
            E+ ++ L RR + E  +    P  G SA   +DN  Y + V+I+GP  + YEGGVFK  L  P++YP+  PK++F+T+I+HPN+DK G +C+ IL             +++W P   + T+++S+ ++L+ PN D P + + AK W+
Sbjct:    3 ELQSALLLRRQLAELNK---NPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWR 146          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 53/147 (36.05%), Postives = 88/147 (59.86%), Query Frame = 2
Query:   41 EMANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 439
            E+ ++ L RR + E  +    P  G SA   +DN  Y + V+I+GP  + YEGGVFK  L  P++YP+  PK++F+T+I+HPN+DK G +C+ IL             +++W P   + T+++S+ ++L+ PN D P + + AK W+
Sbjct:    3 ELQSALLLRRQLAELNK---NPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWR 146          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 53/147 (36.05%), Postives = 88/147 (59.86%), Query Frame = 2
Query:   41 EMANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 439
            E+ ++ L RR + E  +    P  G SA   +DN  Y + V+I+GP  + YEGGVFK  L  P++YP+  PK++F+T+I+HPN+DK G +C+ IL             +++W P   + T+++S+ ++L+ PN D P + + AK W+
Sbjct:    3 ELQSALLLRRQLAELNK---NPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWR 146          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   65 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 502
            R++++E Q + + P  GI    +E ++     +I GP  +PY  GVF+++L L +++P   PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L+E   K       +  + A+  T ++A  A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UBE2S_DROER (Ubiquitin-conjugating enzyme E2 S OS=Drosophila erecta GN=GG18165 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   65 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 502
            R++++E Q + + P  GI    +E ++     +I GP  +PY  GVF+++L L +++P   PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L+E   K       +  + A+  T ++A  A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UBE2S_DROAN (Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae GN=GF21161 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.797e-22
Identity = 51/146 (34.93%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   65 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 502
            R++++E Q + + P  GI    +E ++     +I GP  +PY  G+F+++L L +++P   PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L+E   K       +  + A+  T ++A  A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162          
BLAST of CV884902 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.797e-22
Identity = 53/147 (36.05%), Postives = 87/147 (59.18%), Query Frame = 2
Query:   41 EMANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKD-------------KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 439
            E+ ++ L RR + E  +    P  G SA   +DN  Y + V+I+GP  + YEGGVFK  L  P++YP+  PK++F+T+I+HPN+DK G +C+ IL +             +W P   + T+++S+ ++L+ PN D P + + AK W+
Sbjct:    3 ELQSALLLRRQLAELNK---NPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWR 146          
The following BLAST results are available for this feature:
BLAST of CV884902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
UBE2S_DROSI1.054e-2234.93Ubiquitin-conjugating enzyme E2 S OS=Drosophila si... [more]
UBE2S_DROSE1.054e-2234.93Ubiquitin-conjugating enzyme E2 S OS=Drosophila se... [more]
UBE2S_DROME1.054e-2234.93Ubiquitin-conjugating enzyme E2 S OS=Drosophila me... [more]
UB2G1_RAT1.054e-2236.05Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norve... [more]
UB2G1_MOUSE1.054e-2236.05Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus... [more]
UB2G1_HUMAN1.054e-2236.05Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens... [more]
UBE2S_DROYA1.376e-2235.62Ubiquitin-conjugating enzyme E2 S OS=Drosophila ya... [more]
UBE2S_DROER1.376e-2235.62Ubiquitin-conjugating enzyme E2 S OS=Drosophila er... [more]
UBE2S_DROAN1.797e-2234.93Ubiquitin-conjugating enzyme E2 S OS=Drosophila an... [more]
UB2G1_MACFA1.797e-2236.05Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fasci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011C10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884902 ID=CV884902; Name=CV884902; organism=Citrus sinensis; type=EST; length=739bp
CAACAACAAGAAGGTTAAAAAACAAAAAAAATCGATCTTGGAAATGGCGA
ACAGTAATCTCCCTCGACGTATCATCAAGGAAACACAGCGTCTCCTCAGT
GAACCAGCACCAGGAATAAGTGCATCTCCCTCGGAAGATAATATGCGATA
CTTTAATGTGATGATCCTTGGTCCGACGCAATCTCCATATGAAGGAGGGG
TGTTCAAATTGGAATTATTTTTGCCTGAAGAATATCCAATGGCTGCTCCA
AAGGTCCGATTTCTTACCAAGATATATCATCCTAACATTGATAAGCTTGG
AAGGATTTGTCTTGATATTCTGAAAGACAAGTGGAGTCCAGCTCTCCAGA
TTCGGACTGTACTGTTGAGCATTCAAGCACTTCTGAGTGCTCCTAACCCC
GATGATCCTCTCTCCGAGAACATTGCCAAACACTGGAAAACAAATGAGGC
CGAAGCAGTTGAAACAGCGAAGGAATGGACACGTTTATATGCCAGTGGTG
CTTGATGACATGGTGGAAAATATCACTTCATTCAAATAACAATTGTGCAA
TGTATGCTATTCACTGTCTGTTTAAAATGGAAAATTTGGAAGAATTGAAT
TGATGTTTGAACATTCGGAGTTTGACATTCTGAAAGCTTCCATCTTACCG
CACATGTCAATTATTTTCTTCTTGTGGAAGCCATGTCTTTGAACTTGTAT
GATTAGATGATATACATTGTTTCTCAACTCTTAAATTTC
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